Component
Silica and soluble silicon
A collection spanning soluble silicon chemistry and silica particles. Orthosilicic acid transport, connective-tissue responses and particle injury retain separate molecular identities, routes and experimental exposures.
67 recorded relationships. Experimental role, claim status and evidence remain attached to each record.
How nutrients influence it
Every nutrient with a recorded effect on this component, credited to the nutrient that acted rather than the chapter that recorded it. Open a nutrient to see the findings and the conditions they were measured under.
Other things that act on it
Enzymes, hormones, genes, and other components with a recorded effect. These are not nutrients, so they do not count toward the arrows above. Each finding names the chapter that recorded it.
How nutrients reach it in more than one step
Chains of two or more recorded steps that end here, grouped by the nutrient they start from. Each step is a separate finding, so a chain is a route a mechanism could take, not proof that it does.
Tracing routes…
What it does
Every recorded relationship this component is part of, grouped by its role. Plain wording comes first; the technical statement follows.
Where it participates (unsigned role)
Orthosilicic acid in water did not significantly increase endogenous aluminum excretion over 32 hours in five volunteers.
Experimental context and source evidence
- evidence_access
- Primary abstract
- experimental_model
- Water dosing, small human kinetic study.
- limitations
- Different matrix, baseline aluminum and timing may matter; urinary output is not a measurement of brain aluminum.
- nutrient_topic
- Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
- plain_language
- A separate human study did not reproduce increased aluminum clearance.
- primary_references
- Silicic acid: its gastrointestinal uptake and urinary excretion in man and effects on aluminium excretion. · 1999 · https://pubmed.ncbi.nlm.nih.gov/10612067/ · DOI 10.1016/s0162-0134(99)00126-9
Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 112–118
AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Water dosing, small human kinetic study. · source_derived_draft · unverified_draft
## silica-aluminum-urine-null A separate human study did not reproduce increased aluminum clearance. Orthosilicic acid in water did not significantly increase endogenous aluminum excretion over 32 hours in five volunteers. Model: Water dosing, small human kinetic study. Limitations: Different matrix, baseline aluminum and timing may matter; urinary output is not a measurement of brain aluminum. Evidence access: Primary abstract Silicic acid: its gastrointestinal uptake and urinary excretion in man and effects on aluminium excretion. · 1999 · https://pubmed.ncbi.nlm.nih.gov/10612067/ · DOI 10.1016/s0162-0134(99)00126-9
Complete structured claim and evidenceBeer-derived monosilicic acid ingestion was accompanied by increased urinary aluminum in this study.
Experimental context and source evidence
- evidence_access
- Primary abstract
- experimental_model
- Healthy volunteers; beverage matrix and isotope experiments.
- limitations
- Kidney-lumen complex formation and reduced reabsorption were proposed, not directly established molecular targets.
- nutrient_topic
- Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
- plain_language
- A renal effect was proposed in addition to intestinal binding.
- primary_references
- The role of silicic acid in the renal excretion of aluminium. · 1996 · https://pubmed.ncbi.nlm.nih.gov/8726215/
Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 104–110
AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Healthy volunteers; beverage matrix and isotope experiments. · source_derived_draft · unverified_draft
## silica-aluminum-urine-positive A renal effect was proposed in addition to intestinal binding. Beer-derived monosilicic acid ingestion was accompanied by increased urinary aluminum in this study. Model: Healthy volunteers; beverage matrix and isotope experiments. Limitations: Kidney-lumen complex formation and reduced reabsorption were proposed, not directly established molecular targets. Evidence access: Primary abstract The role of silicic acid in the renal excretion of aluminium. · 1996 · https://pubmed.ncbi.nlm.nih.gov/8726215/
Complete structured claim and evidenceCombined AQP3/AQP7/AQP9/AQP10 RNA interference reduced silicon efflux from preloaded HEK-293 cells.
Experimental context and source evidence
- availability_state
- machinery_impairment Imported condition classification; unverified.
- evidence_access
- Primary full text
- experimental_model
- Human HEK-293 cells, 2 mM loading and brief efflux assay.
- limitations
- Combined knockdown does not quantify each channel’s independent in-vivo contribution.
- nutrient_topic
- Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
- plain_language
- Loss of transport machinery changes silicon movement.
- primary_references
- Aquaporins Mediate Silicon Transport in Humans. · 2015 · https://pubmed.ncbi.nlm.nih.gov/26313002/ · DOI 10.1371/journal.pone.0136149
- trigger_kind
- machinery_impairment Imported condition classification; unverified.
Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 48–54
AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Human HEK-293 cells, 2 mM loading and brief efflux assay. · source_derived_draft · unverified_draft
## silica-aqp-silencing Loss of transport machinery changes silicon movement. Combined AQP3/AQP7/AQP9/AQP10 RNA interference reduced silicon efflux from preloaded HEK-293 cells. Model: Human HEK-293 cells, 2 mM loading and brief efflux assay. Limitations: Combined knockdown does not quantify each channel’s independent in-vivo contribution. Evidence access: Primary full text Aquaporins Mediate Silicon Transport in Humans. · 2015 · https://pubmed.ncbi.nlm.nih.gov/26313002/ · DOI 10.1371/journal.pone.0136149
Complete structured claim and evidenceExpression of human AQP10 increased silicon transport in the tested oocyte and HEK-293 systems.
Experimental context and source evidence
- evidence_access
- Primary full text
- experimental_model
- Human constructs in Xenopus oocytes and human HEK-293 cells.
- limitations
- Expression-system flux does not establish the dominant transporter in every human tissue.
- nutrient_topic
- Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
- plain_language
- AQP10 provides a separately identifiable route for soluble silicon.
- primary_references
- Aquaporins Mediate Silicon Transport in Humans. · 2015 · https://pubmed.ncbi.nlm.nih.gov/26313002/ · DOI 10.1371/journal.pone.0136149
- transport_effect
- raises Expression increased silicon transport in the oocyte and HEK-293 uptake systems.
- transport_pool
- the expressing cell Expression increased silicon transport in the oocyte and HEK-293 uptake systems.
Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 40–46
AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Human constructs in Xenopus oocytes and human HEK-293 cells. · source_derived_draft · unverified_draft
## silica-aqp10-transport AQP10 provides a separately identifiable route for soluble silicon. Expression of human AQP10 increased silicon transport in the tested oocyte and HEK-293 systems. Model: Human constructs in Xenopus oocytes and human HEK-293 cells. Limitations: Expression-system flux does not establish the dominant transporter in every human tissue. Evidence access: Primary full text Aquaporins Mediate Silicon Transport in Humans. · 2015 · https://pubmed.ncbi.nlm.nih.gov/26313002/ · DOI 10.1371/journal.pone.0136149
Complete structured claim and evidenceExpression of human AQP3 increased silicon transport in the tested oocyte and HEK-293 systems.
Experimental context and source evidence
- evidence_access
- Primary full text
- experimental_model
- Human constructs in Xenopus oocytes and human HEK-293 cells.
- limitations
- Expression-system flux does not establish the dominant transporter in every human tissue.
- nutrient_topic
- Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
- plain_language
- AQP3 provides a separately identifiable route for soluble silicon.
- primary_references
- Aquaporins Mediate Silicon Transport in Humans. · 2015 · https://pubmed.ncbi.nlm.nih.gov/26313002/ · DOI 10.1371/journal.pone.0136149
- transport_effect
- raises Expression increased silicon transport in the oocyte and HEK-293 uptake systems.
- transport_pool
- the expressing cell Expression increased silicon transport in the oocyte and HEK-293 uptake systems.
Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 16–22
AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Human constructs in Xenopus oocytes and human HEK-293 cells. · source_derived_draft · unverified_draft
## silica-aqp3-transport AQP3 provides a separately identifiable route for soluble silicon. Expression of human AQP3 increased silicon transport in the tested oocyte and HEK-293 systems. Model: Human constructs in Xenopus oocytes and human HEK-293 cells. Limitations: Expression-system flux does not establish the dominant transporter in every human tissue. Evidence access: Primary full text Aquaporins Mediate Silicon Transport in Humans. · 2015 · https://pubmed.ncbi.nlm.nih.gov/26313002/ · DOI 10.1371/journal.pone.0136149
Complete structured claim and evidenceExpression of human AQP7 increased silicon transport in the tested oocyte and HEK-293 systems.
Experimental context and source evidence
- evidence_access
- Primary full text
- experimental_model
- Human constructs in Xenopus oocytes and human HEK-293 cells.
- limitations
- Expression-system flux does not establish the dominant transporter in every human tissue.
- nutrient_topic
- Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
- plain_language
- AQP7 provides a separately identifiable route for soluble silicon.
- primary_references
- Aquaporins Mediate Silicon Transport in Humans. · 2015 · https://pubmed.ncbi.nlm.nih.gov/26313002/ · DOI 10.1371/journal.pone.0136149
- transport_effect
- raises Expression increased silicon transport in the oocyte and HEK-293 uptake systems.
- transport_pool
- the expressing cell Expression increased silicon transport in the oocyte and HEK-293 uptake systems.
Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 24–30
AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Human constructs in Xenopus oocytes and human HEK-293 cells. · source_derived_draft · unverified_draft
## silica-aqp7-transport AQP7 provides a separately identifiable route for soluble silicon. Expression of human AQP7 increased silicon transport in the tested oocyte and HEK-293 systems. Model: Human constructs in Xenopus oocytes and human HEK-293 cells. Limitations: Expression-system flux does not establish the dominant transporter in every human tissue. Evidence access: Primary full text Aquaporins Mediate Silicon Transport in Humans. · 2015 · https://pubmed.ncbi.nlm.nih.gov/26313002/ · DOI 10.1371/journal.pone.0136149
Complete structured claim and evidencePhloretin increased AQP9-mediated silicon influx under the tested hypoosmolar conditions while inhibiting water transport.
Experimental context and source evidence
- evidence_access
- Primary full text
- experimental_model
- Human AQP9 in Xenopus oocytes; 0.1 mM phloretin, 2 mM silicic acid.
- limitations
- Not a demonstrated food interaction; the abstract’s phloretin-sensitive wording does not mean silicon flux was inhibited.
- nutrient_topic
- Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
- plain_language
- A transport inhibitor can affect two substrates differently.
- primary_references
- Aquaporins Mediate Silicon Transport in Humans. · 2015 · https://pubmed.ncbi.nlm.nih.gov/26313002/ · DOI 10.1371/journal.pone.0136149
Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 56–62
AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Human AQP9 in Xenopus oocytes; 0.1 mM phloretin, 2 mM silicic acid. · source_derived_draft · unverified_draft
## silica-aqp9-phloretin A transport inhibitor can affect two substrates differently. Phloretin increased AQP9-mediated silicon influx under the tested hypoosmolar conditions while inhibiting water transport. Model: Human AQP9 in Xenopus oocytes; 0.1 mM phloretin, 2 mM silicic acid. Limitations: Not a demonstrated food interaction; the abstract’s phloretin-sensitive wording does not mean silicon flux was inhibited. Evidence access: Primary full text Aquaporins Mediate Silicon Transport in Humans. · 2015 · https://pubmed.ncbi.nlm.nih.gov/26313002/ · DOI 10.1371/journal.pone.0136149
Complete structured claim and evidenceExpression of human AQP9 increased silicon transport in the tested oocyte and HEK-293 systems.
Experimental context and source evidence
- evidence_access
- Primary full text
- experimental_model
- Human constructs in Xenopus oocytes and human HEK-293 cells.
- limitations
- Expression-system flux does not establish the dominant transporter in every human tissue.
- nutrient_topic
- Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
- plain_language
- AQP9 provides a separately identifiable route for soluble silicon.
- primary_references
- Aquaporins Mediate Silicon Transport in Humans. · 2015 · https://pubmed.ncbi.nlm.nih.gov/26313002/ · DOI 10.1371/journal.pone.0136149
- transport_effect
- raises Expression increased silicon transport in the oocyte and HEK-293 uptake systems.
- transport_pool
- the expressing cell Expression increased silicon transport in the oocyte and HEK-293 uptake systems.
Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 32–38
AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Human constructs in Xenopus oocytes and human HEK-293 cells. · source_derived_draft · unverified_draft
## silica-aqp9-transport AQP9 provides a separately identifiable route for soluble silicon. Expression of human AQP9 increased silicon transport in the tested oocyte and HEK-293 systems. Model: Human constructs in Xenopus oocytes and human HEK-293 cells. Limitations: Expression-system flux does not establish the dominant transporter in every human tissue. Evidence access: Primary full text Aquaporins Mediate Silicon Transport in Humans. · 2015 · https://pubmed.ncbi.nlm.nih.gov/26313002/ · DOI 10.1371/journal.pone.0136149
Complete structured claim and evidenceTen micromolar orthosilicic acid increased BMP2 expression in human osteoblast-like cells.
Experimental context and source evidence
- evidence_access
- Primary abstract
- experimental_model
- Human MG-63/U2-OS cell program.
- limitations
- Expression change does not identify a direct silicon receptor.
- nutrient_topic
- Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
- plain_language
- A bone-development signal increased after exposure.
- primary_references
- Biological Silicon Stimulates Collagen Type 1 and Osteocalcin Synthesis in Human Osteoblast-Like Cells Through the BMP-2/Smad/RUNX2 Signaling Pathway. · 2016 · https://pubmed.ncbi.nlm.nih.gov/27025722/ · DOI 10.1007/s12011-016-0686-3
Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 144–150
AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Human MG-63/U2-OS cell program. · source_derived_draft · unverified_draft
## silica-bmp-expression A bone-development signal increased after exposure. Ten micromolar orthosilicic acid increased BMP2 expression in human osteoblast-like cells. Model: Human MG-63/U2-OS cell program. Limitations: Expression change does not identify a direct silicon receptor. Evidence access: Primary abstract Biological Silicon Stimulates Collagen Type 1 and Osteocalcin Synthesis in Human Osteoblast-Like Cells Through the BMP-2/Smad/RUNX2 Signaling Pathway. · 2016 · https://pubmed.ncbi.nlm.nih.gov/27025722/ · DOI 10.1007/s12011-016-0686-3
Complete structured claim and evidenceCA-074-Me reduced silica-triggered IL-1 beta release, supporting a cathepsin-sensitive step.
Experimental context and source evidence
- evidence_access
- Primary full text
- experimental_model
- Mouse macrophages; 10 micromolar CA-074-Me.
- limitations
- Pharmacology alone does not establish unique cathepsin B necessity. Correction record: A 2026 author correction replaces an erroneously duplicated lower-left Fig. 8c micrograph with the retrieved original. This is a figure correction, not a scientific contradiction or retraction. https://www.nature.com/articles/s41590-026-02468-9
- nutrient_topic
- Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
- plain_language
- A lysosomal protease inhibitor reduced inflammatory output.
- primary_references
- Silica crystals and aluminum salts activate the NALP3 inflammasome through phagosomal destabilization. · 2008 · https://pubmed.ncbi.nlm.nih.gov/18604214/ · DOI 10.1038/ni.1631
Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 448–454
AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Mouse macrophages; 10 micromolar CA-074-Me. · source_derived_draft · unverified_draft
## silica-cathepsin-inhibitor A lysosomal protease inhibitor reduced inflammatory output. CA-074-Me reduced silica-triggered IL-1 beta release, supporting a cathepsin-sensitive step. Model: Mouse macrophages; 10 micromolar CA-074-Me. Limitations: Pharmacology alone does not establish unique cathepsin B necessity. Correction record: A 2026 author correction replaces an erroneously duplicated lower-left Fig. 8c micrograph with the retrieved original. This is a figure correction, not a scientific contradiction or retraction. https://www.nature.com/articles/s41590-026-02468-9 Evidence access: Primary full text Silica crystals and aluminum salts activate the NALP3 inflammasome through phagosomal destabilization. · 2008 · https://pubmed.ncbi.nlm.nih.gov/18604214/ · DOI 10.1038/ni.1631
Complete structured claim and evidenceCathepsin-B-deficient macrophages retained crystal-induced IL-1 beta release in this study.
Experimental context and source evidence
- evidence_access
- Primary full text
- experimental_model
- Mouse bone-marrow macrophages with silica/MSU comparisons.
- limitations
- Compensation and other cathepsins remain possible; no universal dismissal of lysosomal injury.
- nutrient_topic
- Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
- plain_language
- Genetic loss did not reproduce the inhibitor-based necessity claim.
- primary_references
- Activation of NLRP3 inflammasome by crystalline structures via cell surface contact. · 2014 · https://pubmed.ncbi.nlm.nih.gov/25445147/ · DOI 10.1038/srep07281
Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 472–478
AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Mouse bone-marrow macrophages with silica/MSU comparisons. · source_derived_draft · unverified_draft
## silica-cathepsin-knockout Genetic loss did not reproduce the inhibitor-based necessity claim. Cathepsin-B-deficient macrophages retained crystal-induced IL-1 beta release in this study. Model: Mouse bone-marrow macrophages with silica/MSU comparisons. Limitations: Compensation and other cathepsins remain possible; no universal dismissal of lysosomal injury. Evidence access: Primary full text Activation of NLRP3 inflammasome by crystalline structures via cell surface contact. · 2014 · https://pubmed.ncbi.nlm.nih.gov/25445147/ · DOI 10.1038/srep07281
Complete structured claim and evidenceSilicon-deprived chicks showed abnormal epiphyseal cartilage and lower tibial hexosamine/collagen measures.
Experimental context and source evidence
- availability_state
- nutrient_deficiency Imported condition classification; unverified.
- evidence_access
- Primary abstract
- experimental_model
- Four-week cockerels on casein-based diets.
- limitations
- Developmental animal model, not a human nutritional threshold.
- nutrient_topic
- Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
- plain_language
- Growing-animal cartilage was sensitive to the experimental diet.
- primary_references
- Biochemical and morphological changes associated with long bone abnormalities in silicon deficiency. · 1980 · https://pubmed.ncbi.nlm.nih.gov/7373430/ · DOI 10.1093/jn/110.5.1046
- trigger_kind
- nutrient_deficiency Imported condition classification; unverified.
Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 368–374
AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Four-week cockerels on casein-based diets. · source_derived_draft · unverified_draft
## silica-chick-cartilage Growing-animal cartilage was sensitive to the experimental diet. Silicon-deprived chicks showed abnormal epiphyseal cartilage and lower tibial hexosamine/collagen measures. Model: Four-week cockerels on casein-based diets. Limitations: Developmental animal model, not a human nutritional threshold. Evidence access: Primary abstract Biochemical and morphological changes associated with long bone abnormalities in silicon deficiency. · 1980 · https://pubmed.ncbi.nlm.nih.gov/7373430/ · DOI 10.1093/jn/110.5.1046
Complete structured claim and evidenceU18666A-induced cholesterol accumulation reduced silica-induced inflammasome activation in mouse alveolar macrophages.
Experimental context and source evidence
- evidence_access
- Primary full text
- experimental_model
- Pharmacologically altered lysosomal cholesterol handling.
- limitations
- Not evidence that raising blood cholesterol or dietary cholesterol protects the lung.
- nutrient_topic
- Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
- plain_language
- Membrane-lipid handling can modify the response to particles.
- primary_references
- Role of lysosomes in silica-induced inflammasome activation and inflammation in absence of MARCO. · 2014 · https://pubmed.ncbi.nlm.nih.gov/25054161/ · DOI 10.1155/2014/304180
Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 496–502
AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Pharmacologically altered lysosomal cholesterol handling. · source_derived_draft · unverified_draft
## silica-cholesterol-lysosome Membrane-lipid handling can modify the response to particles. U18666A-induced cholesterol accumulation reduced silica-induced inflammasome activation in mouse alveolar macrophages. Model: Pharmacologically altered lysosomal cholesterol handling. Limitations: Not evidence that raising blood cholesterol or dietary cholesterol protects the lung. Evidence access: Primary full text Role of lysosomes in silica-induced inflammasome activation and inflammation in absence of MARCO. · 2014 · https://pubmed.ncbi.nlm.nih.gov/25054161/ · DOI 10.1155/2014/304180
Complete structured claim and evidenceOrthosilicic acid at 10–20 micromolar increased type I collagen synthesis in human osteoblast-like cultures.
Experimental context and source evidence
- evidence_access
- Primary abstract
- experimental_model
- MG-63, HCC1 and primary human marrow-derived osteoblast-like cells.
- limitations
- Cell-culture synthesis is not demonstrated human bone strength or fracture benefit.
- nutrient_topic
- Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
- plain_language
- Bone-forming cells produced more collagen scaffold.
- primary_references
- Orthosilicic acid stimulates collagen type 1 synthesis and osteoblastic differentiation in human osteoblast-like cells in vitro. · 2003 · https://pubmed.ncbi.nlm.nih.gov/12633784/ · DOI 10.1016/s8756-3282(02)00950-x
Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 120–126
AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · MG-63, HCC1 and primary human marrow-derived osteoblast-like cells. · source_derived_draft · unverified_draft
## silica-collagen-production Bone-forming cells produced more collagen scaffold. Orthosilicic acid at 10–20 micromolar increased type I collagen synthesis in human osteoblast-like cultures. Model: MG-63, HCC1 and primary human marrow-derived osteoblast-like cells. Limitations: Cell-culture synthesis is not demonstrated human bone strength or fracture benefit. Evidence access: Primary abstract Orthosilicic acid stimulates collagen type 1 synthesis and osteoblastic differentiation in human osteoblast-like cells in vitro. · 2003 · https://pubmed.ncbi.nlm.nih.gov/12633784/ · DOI 10.1016/s8756-3282(02)00950-x
Complete structured claim and evidenceType I collagen mRNA did not increase despite greater collagen synthesis in treated MG-63 cells.
Experimental context and source evidence
- evidence_access
- Primary abstract
- experimental_model
- Human osteosarcoma-derived MG-63 cells.
- limitations
- Translation, processing and turnover were not all separately resolved.
- nutrient_topic
- Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
- plain_language
- The measured effect was not simply more collagen-gene transcription.
- primary_references
- Orthosilicic acid stimulates collagen type 1 synthesis and osteoblastic differentiation in human osteoblast-like cells in vitro. · 2003 · https://pubmed.ncbi.nlm.nih.gov/12633784/ · DOI 10.1016/s8756-3282(02)00950-x
Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 128–134
AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Human osteosarcoma-derived MG-63 cells. · source_derived_draft · unverified_draft
## silica-collagen-transcript-null The measured effect was not simply more collagen-gene transcription. Type I collagen mRNA did not increase despite greater collagen synthesis in treated MG-63 cells. Model: Human osteosarcoma-derived MG-63 cells. Limitations: Translation, processing and turnover were not all separately resolved. Evidence access: Primary abstract Orthosilicic acid stimulates collagen type 1 synthesis and osteoblastic differentiation in human osteoblast-like cells in vitro. · 2003 · https://pubmed.ncbi.nlm.nih.gov/12633784/ · DOI 10.1016/s8756-3282(02)00950-x
Complete structured claim and evidenceThirty micromolar OSA improved HUVEC proliferation, migration and tube formation under high glucose.
Experimental context and source evidence
- evidence_access
- Primary abstract
- experimental_model
- Human HUVEC high-glucose model.
- limitations
- Clinical diabetic wound efficacy is unestablished; accessed abstract lacks full dose-response and inhibitor details.
- nutrient_topic
- Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
- plain_language
- A recent study tested an additional stress context.
- primary_references
- Orthosilicic Acid Promotes Diabetic Wound Healing Through the PI3 K/AKT/mTOR Signaling Pathway. · 2026 · https://pubmed.ncbi.nlm.nih.gov/40517214/ · DOI 10.1007/s12011-025-04670-6
Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 336–342
AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Human HUVEC high-glucose model. · source_derived_draft · unverified_draft
## silica-diabetic-endothelium A recent study tested an additional stress context. Thirty micromolar OSA improved HUVEC proliferation, migration and tube formation under high glucose. Model: Human HUVEC high-glucose model. Limitations: Clinical diabetic wound efficacy is unestablished; accessed abstract lacks full dose-response and inhibitor details. Evidence access: Primary abstract Orthosilicic Acid Promotes Diabetic Wound Healing Through the PI3 K/AKT/mTOR Signaling Pathway. · 2026 · https://pubmed.ncbi.nlm.nih.gov/40517214/ · DOI 10.1007/s12011-025-04670-6
Complete structured claim and evidenceOSA improved skin-wound healing in db/db mice, with PI3K/Akt/mTOR involvement reported.
Experimental context and source evidence
- evidence_access
- Primary abstract
- experimental_model
- Diabetic db/db mice; primary abstract.
- limitations
- Route, formulation and complete mediation experiments require full-text follow-up; not human treatment evidence.
- nutrient_topic
- Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
- plain_language
- The research included an animal wound outcome.
- primary_references
- Orthosilicic Acid Promotes Diabetic Wound Healing Through the PI3 K/AKT/mTOR Signaling Pathway. · 2026 · https://pubmed.ncbi.nlm.nih.gov/40517214/ · DOI 10.1007/s12011-025-04670-6
Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 344–350
AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Diabetic db/db mice; primary abstract. · source_derived_draft · unverified_draft
## silica-diabetic-mouse-wound The research included an animal wound outcome. OSA improved skin-wound healing in db/db mice, with PI3K/Akt/mTOR involvement reported. Model: Diabetic db/db mice; primary abstract. Limitations: Route, formulation and complete mediation experiments require full-text follow-up; not human treatment evidence. Evidence access: Primary abstract Orthosilicic Acid Promotes Diabetic Wound Healing Through the PI3 K/AKT/mTOR Signaling Pathway. · 2026 · https://pubmed.ncbi.nlm.nih.gov/40517214/ · DOI 10.1007/s12011-025-04670-6
Complete structured claim and evidenceDimethylsilanediol had no discernible survival effect up to 50 micromolar and increased survival at higher tested doses.
Experimental context and source evidence
- evidence_access
- Primary abstract
- experimental_model
- Human osteoblast-like cell comparison.
- limitations
- Environmental silicone degradation product, not evidence that silicone polymers or supplements share this activity.
- nutrient_topic
- Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
- plain_language
- An organosilicon compound produced a different cellular response.
- primary_references
- Divergent effects of orthosilicic acid and dimethylsilanediol on cell survival and adhesion in human osteoblast-like cells. · 2008 · https://pubmed.ncbi.nlm.nih.gov/18755397/ · DOI 10.1016/j.jtemb.2008.02.001
Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 208–214
AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Human osteoblast-like cell comparison. · source_derived_draft · unverified_draft
## silica-dimethyl-form An organosilicon compound produced a different cellular response. Dimethylsilanediol had no discernible survival effect up to 50 micromolar and increased survival at higher tested doses. Model: Human osteoblast-like cell comparison. Limitations: Environmental silicone degradation product, not evidence that silicone polymers or supplements share this activity. Evidence access: Primary abstract Divergent effects of orthosilicic acid and dimethylsilanediol on cell survival and adhesion in human osteoblast-like cells. · 2008 · https://pubmed.ncbi.nlm.nih.gov/18755397/ · DOI 10.1016/j.jtemb.2008.02.001
Complete structured claim and evidenceSilicon-treated HUVECs increased catalase mRNA under the reported normal and peroxide conditions.
Experimental context and source evidence
- evidence_access
- Primary full text
- experimental_model
- Human HUVECs, 0.5 mM silicon preparation.
- limitations
- Expression is not measured catalytic flux or proof that silicon replaces established metal cofactors.
- nutrient_topic
- Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
- plain_language
- An individual antioxidant or vascular enzyme was measured.
- primary_references
- Ionic silicon improves endothelial cells' survival under toxic oxidative stress by overexpressing angiogenic markers and antioxidant enzymes. · 2018 · https://pubmed.ncbi.nlm.nih.gov/30062712/ · DOI 10.1002/term.2744
Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 304–310
AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Human HUVECs, 0.5 mM silicon preparation. · source_derived_draft · unverified_draft
## silica-endothelial-human-catalase An individual antioxidant or vascular enzyme was measured. Silicon-treated HUVECs increased catalase mRNA under the reported normal and peroxide conditions. Model: Human HUVECs, 0.5 mM silicon preparation. Limitations: Expression is not measured catalytic flux or proof that silicon replaces established metal cofactors. Evidence access: Primary full text Ionic silicon improves endothelial cells' survival under toxic oxidative stress by overexpressing angiogenic markers and antioxidant enzymes. · 2018 · https://pubmed.ncbi.nlm.nih.gov/30062712/ · DOI 10.1002/term.2744
Complete structured claim and evidenceThe 0.5 mM silicon preparation increased HIF1A expression in HUVECs with or without the tested peroxide challenge.
Experimental context and source evidence
- evidence_access
- Primary full text
- experimental_model
- Human endothelial cultures; sodium-metasilicate-derived preparation.
- limitations
- Expression association does not establish direct activation or clinical angiogenesis.
- nutrient_topic
- Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
- plain_language
- A distinct vascular regulator changed after exposure.
- primary_references
- Ionic silicon improves endothelial cells' survival under toxic oxidative stress by overexpressing angiogenic markers and antioxidant enzymes. · 2018 · https://pubmed.ncbi.nlm.nih.gov/30062712/ · DOI 10.1002/term.2744
Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 528–534
AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Human endothelial cultures; sodium-metasilicate-derived preparation. · source_derived_draft · unverified_draft
## silica-endothelial-marker-hif1a A distinct vascular regulator changed after exposure. The 0.5 mM silicon preparation increased HIF1A expression in HUVECs with or without the tested peroxide challenge. Model: Human endothelial cultures; sodium-metasilicate-derived preparation. Limitations: Expression association does not establish direct activation or clinical angiogenesis. Evidence access: Primary full text Ionic silicon improves endothelial cells' survival under toxic oxidative stress by overexpressing angiogenic markers and antioxidant enzymes. · 2018 · https://pubmed.ncbi.nlm.nih.gov/30062712/ · DOI 10.1002/term.2744
Complete structured claim and evidenceThe 0.5 mM silicon preparation increased VEGFR2 / KDR expression in HUVECs with or without the tested peroxide challenge.
Experimental context and source evidence
- evidence_access
- Primary full text
- experimental_model
- Human endothelial cultures; sodium-metasilicate-derived preparation.
- limitations
- Expression association does not establish direct activation or clinical angiogenesis.
- nutrient_topic
- Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
- plain_language
- A distinct vascular regulator changed after exposure.
- primary_references
- Ionic silicon improves endothelial cells' survival under toxic oxidative stress by overexpressing angiogenic markers and antioxidant enzymes. · 2018 · https://pubmed.ncbi.nlm.nih.gov/30062712/ · DOI 10.1002/term.2744
Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 544–550
AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Human endothelial cultures; sodium-metasilicate-derived preparation. · source_derived_draft · unverified_draft
## silica-endothelial-marker-human-kdr A distinct vascular regulator changed after exposure. The 0.5 mM silicon preparation increased VEGFR2 / KDR expression in HUVECs with or without the tested peroxide challenge. Model: Human endothelial cultures; sodium-metasilicate-derived preparation. Limitations: Expression association does not establish direct activation or clinical angiogenesis. Evidence access: Primary full text Ionic silicon improves endothelial cells' survival under toxic oxidative stress by overexpressing angiogenic markers and antioxidant enzymes. · 2018 · https://pubmed.ncbi.nlm.nih.gov/30062712/ · DOI 10.1002/term.2744
Complete structured claim and evidenceThe 0.5 mM silicon preparation increased VEGFA expression in HUVECs with or without the tested peroxide challenge.
Experimental context and source evidence
- evidence_access
- Primary full text
- experimental_model
- Human endothelial cultures; sodium-metasilicate-derived preparation.
- limitations
- Expression association does not establish direct activation or clinical angiogenesis.
- nutrient_topic
- Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
- plain_language
- A distinct vascular regulator changed after exposure.
- primary_references
- Ionic silicon improves endothelial cells' survival under toxic oxidative stress by overexpressing angiogenic markers and antioxidant enzymes. · 2018 · https://pubmed.ncbi.nlm.nih.gov/30062712/ · DOI 10.1002/term.2744
Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 536–542
AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Human endothelial cultures; sodium-metasilicate-derived preparation. · source_derived_draft · unverified_draft
## silica-endothelial-marker-human-vegfa A distinct vascular regulator changed after exposure. The 0.5 mM silicon preparation increased VEGFA expression in HUVECs with or without the tested peroxide challenge. Model: Human endothelial cultures; sodium-metasilicate-derived preparation. Limitations: Expression association does not establish direct activation or clinical angiogenesis. Evidence access: Primary full text Ionic silicon improves endothelial cells' survival under toxic oxidative stress by overexpressing angiogenic markers and antioxidant enzymes. · 2018 · https://pubmed.ncbi.nlm.nih.gov/30062712/ · DOI 10.1002/term.2744
Complete structured claim and evidenceSilicon-treated HUVECs increased NOS3 mRNA under the reported normal and peroxide conditions.
Experimental context and source evidence
- evidence_access
- Primary full text
- experimental_model
- Human HUVECs, 0.5 mM silicon preparation.
- limitations
- Expression is not measured catalytic flux or proof that silicon replaces established metal cofactors.
- nutrient_topic
- Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
- plain_language
- An individual antioxidant or vascular enzyme was measured.
- primary_references
- Ionic silicon improves endothelial cells' survival under toxic oxidative stress by overexpressing angiogenic markers and antioxidant enzymes. · 2018 · https://pubmed.ncbi.nlm.nih.gov/30062712/ · DOI 10.1002/term.2744
Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 312–318
AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Human HUVECs, 0.5 mM silicon preparation. · source_derived_draft · unverified_draft
## silica-endothelial-nos3 An individual antioxidant or vascular enzyme was measured. Silicon-treated HUVECs increased NOS3 mRNA under the reported normal and peroxide conditions. Model: Human HUVECs, 0.5 mM silicon preparation. Limitations: Expression is not measured catalytic flux or proof that silicon replaces established metal cofactors. Evidence access: Primary full text Ionic silicon improves endothelial cells' survival under toxic oxidative stress by overexpressing angiogenic markers and antioxidant enzymes. · 2018 · https://pubmed.ncbi.nlm.nih.gov/30062712/ · DOI 10.1002/term.2744
Complete structured claim and evidenceSilicon-treated HUVECs increased SOD1 mRNA under the reported normal and peroxide conditions.
Experimental context and source evidence
- evidence_access
- Primary full text
- experimental_model
- Human HUVECs, 0.5 mM silicon preparation.
- limitations
- Expression is not measured catalytic flux or proof that silicon replaces established metal cofactors.
- nutrient_topic
- Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
- plain_language
- An individual antioxidant or vascular enzyme was measured.
- primary_references
- Ionic silicon improves endothelial cells' survival under toxic oxidative stress by overexpressing angiogenic markers and antioxidant enzymes. · 2018 · https://pubmed.ncbi.nlm.nih.gov/30062712/ · DOI 10.1002/term.2744
Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 296–302
AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Human HUVECs, 0.5 mM silicon preparation. · source_derived_draft · unverified_draft
## silica-endothelial-sod1 An individual antioxidant or vascular enzyme was measured. Silicon-treated HUVECs increased SOD1 mRNA under the reported normal and peroxide conditions. Model: Human HUVECs, 0.5 mM silicon preparation. Limitations: Expression is not measured catalytic flux or proof that silicon replaces established metal cofactors. Evidence access: Primary full text Ionic silicon improves endothelial cells' survival under toxic oxidative stress by overexpressing angiogenic markers and antioxidant enzymes. · 2018 · https://pubmed.ncbi.nlm.nih.gov/30062712/ · DOI 10.1002/term.2744
Complete structured claim and evidenceA 0.5 mM silicon preparation improved HUVEC viability during hydrogen-peroxide exposure.
Experimental context and source evidence
- evidence_access
- Primary full text
- experimental_model
- Sodium-metasilicate-derived medium; 0.6 mM H2O2 challenge.
- limitations
- Authors label exposure Si4+; this is not a measured pool of free aqueous Si4+. Supraphysiological culture exposure.
- nutrient_topic
- Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
- plain_language
- Dissolved preparation altered the response to oxidative stress.
- primary_references
- Ionic silicon improves endothelial cells' survival under toxic oxidative stress by overexpressing angiogenic markers and antioxidant enzymes. · 2018 · https://pubmed.ncbi.nlm.nih.gov/30062712/ · DOI 10.1002/term.2744
Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 288–294
AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Sodium-metasilicate-derived medium; 0.6 mM H2O2 challenge. · source_derived_draft · unverified_draft
## silica-endothelial-survival Dissolved preparation altered the response to oxidative stress. A 0.5 mM silicon preparation improved HUVEC viability during hydrogen-peroxide exposure. Model: Sodium-metasilicate-derived medium; 0.6 mM H2O2 challenge. Limitations: Authors label exposure Si4+; this is not a measured pool of free aqueous Si4+. Supraphysiological culture exposure. Evidence access: Primary full text Ionic silicon improves endothelial cells' survival under toxic oxidative stress by overexpressing angiogenic markers and antioxidant enzymes. · 2018 · https://pubmed.ncbi.nlm.nih.gov/30062712/ · DOI 10.1002/term.2744
Complete structured claim and evidenceUrinary recovery was approximately 43% for orthosilicic acid, 17% for choline-stabilized acid and 1% for colloidal silica in this comparison.
Experimental context and source evidence
- evidence_access
- Primary abstract
- experimental_model
- Small crossover comparisons; colloidal silica n=3, other sources at least five.
- limitations
- Different preparations and dissolution; not proof that choline itself suppresses absorption or defines a cofactor.
- nutrient_topic
- Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
- plain_language
- The same elemental amount need not deliver the same soluble exposure.
- primary_references
- The comparative absorption of silicon from different foods and food supplements. · 2009 · https://pubmed.ncbi.nlm.nih.gov/19356271/ · DOI 10.1017/S0007114509311757
Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 80–86
AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Small crossover comparisons; colloidal silica n=3, other sources at least five. · source_derived_draft · unverified_draft
## silica-formulation-absorption The same elemental amount need not deliver the same soluble exposure. Urinary recovery was approximately 43% for orthosilicic acid, 17% for choline-stabilized acid and 1% for colloidal silica in this comparison. Model: Small crossover comparisons; colloidal silica n=3, other sources at least five. Limitations: Different preparations and dissolution; not proof that choline itself suppresses absorption or defines a cofactor. Evidence access: Primary abstract The comparative absorption of silicon from different foods and food supplements. · 2009 · https://pubmed.ncbi.nlm.nih.gov/19356271/ · DOI 10.1017/S0007114509311757
Complete structured claim and evidenceLumbar spine BMD did not significantly change; a femoral-neck signal arose in a post-hoc subgroup.
Experimental context and source evidence
- evidence_access
- Primary abstract
- experimental_model
- Same 12-month calcium/D3-background trial.
- limitations
- Post-hoc subgroup findings are exploratory; not independent replication.
- nutrient_topic
- Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
- plain_language
- A matrix marker and bone-density outcome did not provide equivalent evidence.
- primary_references
- Choline-stabilized orthosilicic acid supplementation as an adjunct to calcium/vitamin D3 stimulates markers of bone formation in osteopenic females: a randomized, placebo-controlled trial. · 2008 · https://pubmed.ncbi.nlm.nih.gov/18547426/ · DOI 10.1186/1471-2474-9-85
Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 384–390
AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Same 12-month calcium/D3-background trial. · source_derived_draft · unverified_draft
## silica-human-bmd-null A matrix marker and bone-density outcome did not provide equivalent evidence. Lumbar spine BMD did not significantly change; a femoral-neck signal arose in a post-hoc subgroup. Model: Same 12-month calcium/D3-background trial. Limitations: Post-hoc subgroup findings are exploratory; not independent replication. Evidence access: Primary abstract Choline-stabilized orthosilicic acid supplementation as an adjunct to calcium/vitamin D3 stimulates markers of bone formation in osteopenic females: a randomized, placebo-controlled trial. · 2008 · https://pubmed.ncbi.nlm.nih.gov/18547426/ · DOI 10.1186/1471-2474-9-85
Complete structured claim and evidenceHuman MARCO expression in CHO cells supported silica binding and apoptosis.
Experimental context and source evidence
- evidence_access
- Primary abstract
- experimental_model
- Human construct in Chinese hamster ovary cells.
- limitations
- Not direct observation of human lung exposure or a universal uptake route.
- nutrient_topic
- Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
- plain_language
- A human receptor was tested in a nonhuman host cell.
- primary_references
- MARCO mediates silica uptake and toxicity in alveolar macrophages from C57BL/6 mice. · 2006 · https://pubmed.ncbi.nlm.nih.gov/16984918/ · DOI 10.1074/jbc.M605229200
Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 416–422
AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Human construct in Chinese hamster ovary cells. · source_derived_draft · unverified_draft
## silica-human-marco-binding A human receptor was tested in a nonhuman host cell. Human MARCO expression in CHO cells supported silica binding and apoptosis. Model: Human construct in Chinese hamster ovary cells. Limitations: Not direct observation of human lung exposure or a universal uptake route. Evidence access: Primary abstract MARCO mediates silica uptake and toxicity in alveolar macrophages from C57BL/6 mice. · 2006 · https://pubmed.ncbi.nlm.nih.gov/16984918/ · DOI 10.1074/jbc.M605229200
Complete structured claim and evidencePINP differed from placebo at 12 months in the 6- and 12-mg Si groups without a clear dose response.
Experimental context and source evidence
- evidence_access
- Primary abstract
- experimental_model
- 184 women randomized; 136 completed; all received 1,000 mg calcium and 20 micrograms D3 daily.
- limitations
- Marker result is not fracture prevention; attrition and multiple endpoints matter.
- nutrient_topic
- Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
- plain_language
- A collagen-formation marker changed on top of calcium and vitamin D.
- primary_references
- Choline-stabilized orthosilicic acid supplementation as an adjunct to calcium/vitamin D3 stimulates markers of bone formation in osteopenic females: a randomized, placebo-controlled trial. · 2008 · https://pubmed.ncbi.nlm.nih.gov/18547426/ · DOI 10.1186/1471-2474-9-85
Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 376–382
AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · 184 women randomized; 136 completed; all received 1,000 mg calcium and 20 micrograms D3 daily. · source_derived_draft · unverified_draft
## silica-human-pinp A collagen-formation marker changed on top of calcium and vitamin D. PINP differed from placebo at 12 months in the 6- and 12-mg Si groups without a clear dose response. Model: 184 women randomized; 136 completed; all received 1,000 mg calcium and 20 micrograms D3 daily. Limitations: Marker result is not fracture prevention; attrition and multiple endpoints matter. Evidence access: Primary abstract Choline-stabilized orthosilicic acid supplementation as an adjunct to calcium/vitamin D3 stimulates markers of bone formation in osteopenic females: a randomized, placebo-controlled trial. · 2008 · https://pubmed.ncbi.nlm.nih.gov/18547426/ · DOI 10.1186/1471-2474-9-85
Complete structured claim and evidenceProlyl hydroxylase inhibitors abolished the orthosilicic-acid-associated collagen increase.
Experimental context and source evidence
- availability_state
- machinery_impairment Imported condition classification; unverified.
- evidence_access
- Primary abstract
- experimental_model
- Human osteoblast-like cell inhibitor study.
- limitations
- Does not prove direct silicon binding or silicon as an obligatory enzyme cofactor.
- nutrient_topic
- Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
- plain_language
- Intact collagen-processing machinery was needed for the response.
- primary_references
- Orthosilicic acid stimulates collagen type 1 synthesis and osteoblastic differentiation in human osteoblast-like cells in vitro. · 2003 · https://pubmed.ncbi.nlm.nih.gov/12633784/ · DOI 10.1016/s8756-3282(02)00950-x
- trigger_kind
- machinery_impairment Imported condition classification; unverified.
Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 136–142
AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Human osteoblast-like cell inhibitor study. · source_derived_draft · unverified_draft
## silica-hydroxylase-block Intact collagen-processing machinery was needed for the response. Prolyl hydroxylase inhibitors abolished the orthosilicic-acid-associated collagen increase. Model: Human osteoblast-like cell inhibitor study. Limitations: Does not prove direct silicon binding or silicon as an obligatory enzyme cofactor. Evidence access: Primary abstract Orthosilicic acid stimulates collagen type 1 synthesis and osteoblastic differentiation in human osteoblast-like cells in vitro. · 2003 · https://pubmed.ncbi.nlm.nih.gov/12633784/ · DOI 10.1016/s8756-3282(02)00950-x
Complete structured claim and evidenceLeupeptin reduced the measured cathepsin-B signal without preventing the nanoparticle-associated pyroptosis response.
Experimental context and source evidence
- evidence_access
- Primary full text
- experimental_model
- Mouse RAW-ASC cells; 1 microgram/mL leupeptin.
- limitations
- Leupeptin is not cathepsin-B-specific; measured abundance is not a selective genetic activity test.
- nutrient_topic
- Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
- plain_language
- A protease-inhibitor result also failed to establish cathepsin B necessity.
- primary_references
- Characterization of Cathepsin B in Mediating Silica Nanoparticle-Induced Macrophage Pyroptosis via an NLRP3-Dependent Manner. · 2022 · https://pubmed.ncbi.nlm.nih.gov/35966002/ · DOI 10.2147/JIR.S371536
Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 512–518
AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Mouse RAW-ASC cells; 1 microgram/mL leupeptin. · source_derived_draft · unverified_draft
## silica-leupeptin-null A protease-inhibitor result also failed to establish cathepsin B necessity. Leupeptin reduced the measured cathepsin-B signal without preventing the nanoparticle-associated pyroptosis response. Model: Mouse RAW-ASC cells; 1 microgram/mL leupeptin. Limitations: Leupeptin is not cathepsin-B-specific; measured abundance is not a selective genetic activity test. Evidence access: Primary full text Characterization of Cathepsin B in Mediating Silica Nanoparticle-Induced Macrophage Pyroptosis via an NLRP3-Dependent Manner. · 2022 · https://pubmed.ncbi.nlm.nih.gov/35966002/ · DOI 10.2147/JIR.S371536
Complete structured claim and evidenceLY294002 reduced pathway signals and osteogenic markers during orthosilicic acid treatment.
Experimental context and source evidence
- availability_state
- machinery_impairment Imported condition classification; unverified.
- evidence_access
- Primary abstract
- experimental_model
- Human osteoblast-like cultures.
- limitations
- LY294002 has off-target effects and is not an inhibitor specific to the entire PI3K–Akt–mTOR chain.
- nutrient_topic
- Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
- plain_language
- The cell response was sensitive to PI3K-pathway blockade.
- primary_references
- Orthosilicic Acid Accelerates Bone Formation in Human Osteoblast-Like Cells Through the PI3K-Akt-mTOR Pathway. · 2019 · https://pubmed.ncbi.nlm.nih.gov/30421162/ · DOI 10.1007/s12011-018-1574-9
- trigger_kind
- machinery_impairment Imported condition classification; unverified.
Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 176–182
AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Human osteoblast-like cultures. · source_derived_draft · unverified_draft
## silica-ly294002-block The cell response was sensitive to PI3K-pathway blockade. LY294002 reduced pathway signals and osteogenic markers during orthosilicic acid treatment. Model: Human osteoblast-like cultures. Limitations: LY294002 has off-target effects and is not an inhibitor specific to the entire PI3K–Akt–mTOR chain. Evidence access: Primary abstract Orthosilicic Acid Accelerates Bone Formation in Human Osteoblast-Like Cells Through the PI3K-Akt-mTOR Pathway. · 2019 · https://pubmed.ncbi.nlm.nih.gov/30421162/ · DOI 10.1007/s12011-018-1574-9
Complete structured claim and evidencePhagocytosed silica caused lysosomal swelling and leakage in mouse macrophages.
Experimental context and source evidence
- evidence_access
- Primary full text
- experimental_model
- Mouse macrophage imaging of vesicular cargo redistribution.
- limitations
- Particle preparation and cellular priming matter. Correction record: A 2026 author correction replaces an erroneously duplicated lower-left Fig. 8c micrograph with the retrieved original. This is a figure correction, not a scientific contradiction or retraction. https://www.nature.com/articles/s41590-026-02468-9
- nutrient_topic
- Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
- plain_language
- Particles can damage the compartment that engulfs them.
- primary_references
- Silica crystals and aluminum salts activate the NALP3 inflammasome through phagosomal destabilization. · 2008 · https://pubmed.ncbi.nlm.nih.gov/18604214/ · DOI 10.1038/ni.1631
Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 424–430
AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Mouse macrophage imaging of vesicular cargo redistribution. · source_derived_draft · unverified_draft
## silica-lysosome-damage Particles can damage the compartment that engulfs them. Phagocytosed silica caused lysosomal swelling and leakage in mouse macrophages. Model: Mouse macrophage imaging of vesicular cargo redistribution. Limitations: Particle preparation and cellular priming matter. Correction record: A 2026 author correction replaces an erroneously duplicated lower-left Fig. 8c micrograph with the retrieved original. This is a figure correction, not a scientific contradiction or retraction. https://www.nature.com/articles/s41590-026-02468-9 Evidence access: Primary full text Silica crystals and aluminum salts activate the NALP3 inflammasome through phagosomal destabilization. · 2008 · https://pubmed.ncbi.nlm.nih.gov/18604214/ · DOI 10.1038/ni.1631
Complete structured claim and evidenceMARCO-null alveolar macrophages showed greater lysosomal leakage and IL-1 beta/caspase-1 responses despite lower silica uptake.
Experimental context and source evidence
- availability_state
- machinery_impairment Imported condition classification; unverified.
- evidence_access
- Primary full text
- experimental_model
- Primary mouse macrophages; silica 100 micrograms/mL.
- limitations
- Receptor uptake and lysosomal resilience are separate functions; not a contradiction of uptake measurements.
- nutrient_topic
- Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
- plain_language
- Less uptake did not necessarily mean less inflammation.
- primary_references
- Role of lysosomes in silica-induced inflammasome activation and inflammation in absence of MARCO. · 2014 · https://pubmed.ncbi.nlm.nih.gov/25054161/ · DOI 10.1155/2014/304180
- trigger_kind
- machinery_impairment Imported condition classification; unverified.
Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 488–494
AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Primary mouse macrophages; silica 100 micrograms/mL. · source_derived_draft · unverified_draft
## silica-marco-lysosome-loss Less uptake did not necessarily mean less inflammation. MARCO-null alveolar macrophages showed greater lysosomal leakage and IL-1 beta/caspase-1 responses despite lower silica uptake. Model: Primary mouse macrophages; silica 100 micrograms/mL. Limitations: Receptor uptake and lysosomal resilience are separate functions; not a contradiction of uptake measurements. Evidence access: Primary full text Role of lysosomes in silica-induced inflammasome activation and inflammation in absence of MARCO. · 2014 · https://pubmed.ncbi.nlm.nih.gov/25054161/ · DOI 10.1155/2014/304180
Complete structured claim and evidenceMARCO loss or antibody blockade prevented silica uptake and cytotoxicity in C57BL/6 alveolar macrophages.
Experimental context and source evidence
- availability_state
- machinery_impairment Imported condition classification; unverified.
- evidence_access
- Primary abstract
- experimental_model
- Primary mouse macrophages; receptor-null and antibody experiments.
- limitations
- Mouse strain matters: BALB/c uptake was not blocked by the same receptor antibodies.
- nutrient_topic
- Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
- plain_language
- A scavenger receptor can gate particle entry.
- primary_references
- MARCO mediates silica uptake and toxicity in alveolar macrophages from C57BL/6 mice. · 2006 · https://pubmed.ncbi.nlm.nih.gov/16984918/ · DOI 10.1074/jbc.M605229200
- trigger_kind
- machinery_impairment Imported condition classification; unverified.
Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 408–414
AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Primary mouse macrophages; receptor-null and antibody experiments. · source_derived_draft · unverified_draft
## silica-marco-uptake A scavenger receptor can gate particle entry. MARCO loss or antibody blockade prevented silica uptake and cytotoxicity in C57BL/6 alveolar macrophages. Model: Primary mouse macrophages; receptor-null and antibody experiments. Limitations: Mouse strain matters: BALB/c uptake was not blocked by the same receptor antibodies. Evidence access: Primary abstract MARCO mediates silica uptake and toxicity in alveolar macrophages from C57BL/6 mice. · 2006 · https://pubmed.ncbi.nlm.nih.gov/16984918/ · DOI 10.1074/jbc.M605229200
Complete structured claim and evidenceSilicon-releasing microcarriers increased HIF1A expression and stabilization, attributed to reduced PHD2 activity in HUVECs.
Experimental context and source evidence
- evidence_access
- Primary abstract
- experimental_model
- Human endothelial cells; released silicon in the ppm range.
- limitations
- Accessed abstract does not establish direct inhibitor binding; HIF PHD2 differs from collagen prolyl hydroxylase.
- nutrient_topic
- Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
- plain_language
- A biomaterial study implicated oxygen-sensing machinery.
- primary_references
- Promoting angiogenesis with mesoporous microcarriers through a synergistic action of delivered silicon ion and VEGF. · 2017 · https://pubmed.ncbi.nlm.nih.gov/27918936/ · DOI 10.1016/j.biomaterials.2016.11.053
Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 272–278
AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Human endothelial cells; released silicon in the ppm range. · source_derived_draft · unverified_draft
## silica-microcarrier-hif A biomaterial study implicated oxygen-sensing machinery. Silicon-releasing microcarriers increased HIF1A expression and stabilization, attributed to reduced PHD2 activity in HUVECs. Model: Human endothelial cells; released silicon in the ppm range. Limitations: Accessed abstract does not establish direct inhibitor binding; HIF PHD2 differs from collagen prolyl hydroxylase. Evidence access: Primary abstract Promoting angiogenesis with mesoporous microcarriers through a synergistic action of delivered silicon ion and VEGF. · 2017 · https://pubmed.ncbi.nlm.nih.gov/27918936/ · DOI 10.1016/j.biomaterials.2016.11.053
Complete structured claim and evidenceMicrocarriers releasing silicon and loaded VEGF increased endothelial migration and tubular networking.
Experimental context and source evidence
- evidence_access
- Primary abstract
- experimental_model
- Human HUVECs; engineered local-release formulation.
- limitations
- Not evidence of oral silica/VEGF supplementation or a universal synergy.
- nutrient_topic
- Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
- plain_language
- A tested growth-factor combination promoted vascular-cell behavior.
- primary_references
- Promoting angiogenesis with mesoporous microcarriers through a synergistic action of delivered silicon ion and VEGF. · 2017 · https://pubmed.ncbi.nlm.nih.gov/27918936/ · DOI 10.1016/j.biomaterials.2016.11.053
Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 280–286
AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Human HUVECs; engineered local-release formulation. · source_derived_draft · unverified_draft
## silica-microcarrier-vegf A tested growth-factor combination promoted vascular-cell behavior. Microcarriers releasing silicon and loaded VEGF increased endothelial migration and tubular networking. Model: Human HUVECs; engineered local-release formulation. Limitations: Not evidence of oral silica/VEGF supplementation or a universal synergy. Evidence access: Primary abstract Promoting angiogenesis with mesoporous microcarriers through a synergistic action of delivered silicon ion and VEGF. · 2017 · https://pubmed.ncbi.nlm.nih.gov/27918936/ · DOI 10.1016/j.biomaterials.2016.11.053
Complete structured claim and evidenceOrthosilicic acid increased miR-146a during later osteogenic differentiation of human mesenchymal stromal cells.
Experimental context and source evidence
- evidence_access
- Primary abstract
- experimental_model
- Human MSC microarray and qPCR experiments.
- limitations
- Late-stage association is distinct from identification of the upstream silicon sensor.
- nutrient_topic
- Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
- plain_language
- A regulatory RNA connects exposure to cell-state change.
- primary_references
- Orthosilicic acid, Si(OH)4, stimulates osteoblast differentiation in vitro by upregulating miR-146a to antagonize NF-κB activation. · 2016 · https://pubmed.ncbi.nlm.nih.gov/27163405/ · DOI 10.1016/j.actbio.2016.05.007
Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 184–190
AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Human MSC microarray and qPCR experiments. · source_derived_draft · unverified_draft
## silica-mir146a A regulatory RNA connects exposure to cell-state change. Orthosilicic acid increased miR-146a during later osteogenic differentiation of human mesenchymal stromal cells. Model: Human MSC microarray and qPCR experiments. Limitations: Late-stage association is distinct from identification of the upstream silicon sensor. Evidence access: Primary abstract Orthosilicic acid, Si(OH)4, stimulates osteoblast differentiation in vitro by upregulating miR-146a to antagonize NF-κB activation. · 2016 · https://pubmed.ncbi.nlm.nih.gov/27163405/ · DOI 10.1016/j.actbio.2016.05.007
Complete structured claim and evidenceThe monomeric preparation did not significantly reduce aluminum availability in the same study.
Experimental context and source evidence
- evidence_access
- Primary abstract
- experimental_model
- Same three-person human tracer experiment.
- limitations
- Chemical-form difference is not a scientific contradiction.
- nutrient_topic
- Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
- plain_language
- Soluble monomers and oligomers do not behave identically.
- primary_references
- Oligomeric but not monomeric silica prevents aluminum absorption in humans. · 2000 · https://pubmed.ncbi.nlm.nih.gov/10731501/ · DOI 10.1093/ajcn/71.4.944
Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 96–102
AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Same three-person human tracer experiment. · source_derived_draft · unverified_draft
## silica-monomer-aluminum-null Soluble monomers and oligomers do not behave identically. The monomeric preparation did not significantly reduce aluminum availability in the same study. Model: Same three-person human tracer experiment. Limitations: Chemical-form difference is not a scientific contradiction. Evidence access: Primary abstract Oligomeric but not monomeric silica prevents aluminum absorption in humans. · 2000 · https://pubmed.ncbi.nlm.nih.gov/10731501/ · DOI 10.1093/ajcn/71.4.944
Complete structured claim and evidenceAnti-miR-146a suppressed differentiation in MC3T3 preosteoblasts in the silicate study.
Experimental context and source evidence
- availability_state
- machinery_impairment Imported condition classification; unverified.
- evidence_access
- Primary abstract
- experimental_model
- Mouse MC3T3 cells; distinguish from the human MSC discovery assay.
- limitations
- Abstract does not resolve all species-specific downstream targets.
- nutrient_topic
- Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
- plain_language
- Removing a regulatory RNA weakened bone-cell maturation.
- primary_references
- Orthosilicic acid, Si(OH)4, stimulates osteoblast differentiation in vitro by upregulating miR-146a to antagonize NF-κB activation. · 2016 · https://pubmed.ncbi.nlm.nih.gov/27163405/ · DOI 10.1016/j.actbio.2016.05.007
- trigger_kind
- machinery_impairment Imported condition classification; unverified.
Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 192–198
AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Mouse MC3T3 cells; distinguish from the human MSC discovery assay. · source_derived_draft · unverified_draft
## silica-mouse-antimir Removing a regulatory RNA weakened bone-cell maturation. Anti-miR-146a suppressed differentiation in MC3T3 preosteoblasts in the silicate study. Model: Mouse MC3T3 cells; distinguish from the human MSC discovery assay. Limitations: Abstract does not resolve all species-specific downstream targets. Evidence access: Primary abstract Orthosilicic acid, Si(OH)4, stimulates osteoblast differentiation in vitro by upregulating miR-146a to antagonize NF-κB activation. · 2016 · https://pubmed.ncbi.nlm.nih.gov/27163405/ · DOI 10.1016/j.actbio.2016.05.007
Complete structured claim and evidenceA 0.1 mM silicon preparation increased C2C12 viability, migration and myotube formation.
Experimental context and source evidence
- evidence_access
- Primary full text
- experimental_model
- Mouse C2C12 cultures; sodium-metasilicate-derived medium.
- limitations
- Not proof of human muscle regeneration after supplementation.
- nutrient_topic
- Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
- plain_language
- The soluble-preparation findings extend beyond bone cells.
- primary_references
- Ionic Silicon Protects Oxidative Damage and Promotes Skeletal Muscle Cell Regeneration. · 2021 · https://pubmed.ncbi.nlm.nih.gov/33419056/ · DOI 10.3390/ijms22020497
Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 320–326
AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Mouse C2C12 cultures; sodium-metasilicate-derived medium. · source_derived_draft · unverified_draft
## silica-muscle-myotubes The soluble-preparation findings extend beyond bone cells. A 0.1 mM silicon preparation increased C2C12 viability, migration and myotube formation. Model: Mouse C2C12 cultures; sodium-metasilicate-derived medium. Limitations: Not proof of human muscle regeneration after supplementation. Evidence access: Primary full text Ionic Silicon Protects Oxidative Damage and Promotes Skeletal Muscle Cell Regeneration. · 2021 · https://pubmed.ncbi.nlm.nih.gov/33419056/ · DOI 10.3390/ijms22020497
Complete structured claim and evidenceSilicon preparations at 0.1–2 mM attenuated peroxide-associated loss of viability and differentiation.
Experimental context and source evidence
- evidence_access
- Primary full text
- experimental_model
- Mouse muscle-cell culture, 24-hour challenge experiments.
- limitations
- Does not identify a direct antioxidant reaction or an in-vivo effective dose.
- nutrient_topic
- Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
- plain_language
- Oxidative challenge changed the context in which protection was observed.
- primary_references
- Ionic Silicon Protects Oxidative Damage and Promotes Skeletal Muscle Cell Regeneration. · 2021 · https://pubmed.ncbi.nlm.nih.gov/33419056/ · DOI 10.3390/ijms22020497
Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 328–334
AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Mouse muscle-cell culture, 24-hour challenge experiments. · source_derived_draft · unverified_draft
## silica-muscle-peroxide Oxidative challenge changed the context in which protection was observed. Silicon preparations at 0.1–2 mM attenuated peroxide-associated loss of viability and differentiation. Model: Mouse muscle-cell culture, 24-hour challenge experiments. Limitations: Does not identify a direct antioxidant reaction or an in-vivo effective dose. Evidence access: Primary full text Ionic Silicon Protects Oxidative Damage and Promotes Skeletal Muscle Cell Regeneration. · 2021 · https://pubmed.ncbi.nlm.nih.gov/33419056/ · DOI 10.3390/ijms22020497
Complete structured claim and evidenceSilica nanoparticles increased inflammasome/pyroptosis-associated markers; MCC950 suppressed the response.
Experimental context and source evidence
- evidence_access
- Primary full text
- experimental_model
- Mouse RAW-ASC cells; LPS priming, 100 micrograms/mL silica, approximately 30 nm particles.
- limitations
- Do not assume all sizes, coatings or amorphous preparations behave identically.
- nutrient_topic
- Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
- plain_language
- A nanoparticle preparation was examined separately from quartz.
- primary_references
- Characterization of Cathepsin B in Mediating Silica Nanoparticle-Induced Macrophage Pyroptosis via an NLRP3-Dependent Manner. · 2022 · https://pubmed.ncbi.nlm.nih.gov/35966002/ · DOI 10.2147/JIR.S371536
Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 504–510
AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Mouse RAW-ASC cells; LPS priming, 100 micrograms/mL silica, approximately 30 nm particles. · source_derived_draft · unverified_draft
## silica-nanoparticle-nlrp3 A nanoparticle preparation was examined separately from quartz. Silica nanoparticles increased inflammasome/pyroptosis-associated markers; MCC950 suppressed the response. Model: Mouse RAW-ASC cells; LPS priming, 100 micrograms/mL silica, approximately 30 nm particles. Limitations: Do not assume all sizes, coatings or amorphous preparations behave identically. Evidence access: Primary full text Characterization of Cathepsin B in Mediating Silica Nanoparticle-Induced Macrophage Pyroptosis via an NLRP3-Dependent Manner. · 2022 · https://pubmed.ncbi.nlm.nih.gov/35966002/ · DOI 10.2147/JIR.S371536
Complete structured claim and evidenceOrthosilicic acid attenuated TNF-induced NF-kappaB activation in the osteoblast experimental program.
Experimental context and source evidence
- evidence_access
- Primary abstract
- experimental_model
- Human MSC/mouse preosteoblast study; exact species for each downstream assay unresolved in accessed abstract.
- limitations
- Do not assign all downstream experiments to human cells or infer an oral anti-inflammatory treatment.
- nutrient_topic
- Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
- plain_language
- A regulatory-RNA response was linked to lower inflammatory signaling.
- primary_references
- Orthosilicic acid, Si(OH)4, stimulates osteoblast differentiation in vitro by upregulating miR-146a to antagonize NF-κB activation. · 2016 · https://pubmed.ncbi.nlm.nih.gov/27163405/ · DOI 10.1016/j.actbio.2016.05.007
Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 520–526
AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Human MSC/mouse preosteoblast study; exact species for each downstream assay unresolved in accessed abstract. · source_derived_draft · unverified_draft
## silica-nfkb-regulation A regulatory-RNA response was linked to lower inflammatory signaling. Orthosilicic acid attenuated TNF-induced NF-kappaB activation in the osteoblast experimental program. Model: Human MSC/mouse preosteoblast study; exact species for each downstream assay unresolved in accessed abstract. Limitations: Do not assign all downstream experiments to human cells or infer an oral anti-inflammatory treatment. Evidence access: Primary abstract Orthosilicic acid, Si(OH)4, stimulates osteoblast differentiation in vitro by upregulating miR-146a to antagonize NF-κB activation. · 2016 · https://pubmed.ncbi.nlm.nih.gov/27163405/ · DOI 10.1016/j.actbio.2016.05.007
Complete structured claim and evidenceNlrp3-deficient macrophages failed to mount the normal silica-induced caspase-1/IL-1 beta response.
Experimental context and source evidence
- availability_state
- machinery_impairment Imported condition classification; unverified.
- evidence_access
- Primary full text
- experimental_model
- LPS-primed mouse macrophage genetic comparison.
- limitations
- Priming and activation are separate; dietary silicon is not the particle stimulus. Correction record: A 2026 author correction replaces an erroneously duplicated lower-left Fig. 8c micrograph with the retrieved original. This is a figure correction, not a scientific contradiction or retraction. https://www.nature.com/articles/s41590-026-02468-9
- nutrient_topic
- Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
- plain_language
- The sensor is a distinct necessary component in this model.
- primary_references
- Silica crystals and aluminum salts activate the NALP3 inflammasome through phagosomal destabilization. · 2008 · https://pubmed.ncbi.nlm.nih.gov/18604214/ · DOI 10.1038/ni.1631
- trigger_kind
- machinery_impairment Imported condition classification; unverified.
Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 440–446
AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · LPS-primed mouse macrophage genetic comparison. · source_derived_draft · unverified_draft
## silica-nlrp3-loss The sensor is a distinct necessary component in this model. Nlrp3-deficient macrophages failed to mount the normal silica-induced caspase-1/IL-1 beta response. Model: LPS-primed mouse macrophage genetic comparison. Limitations: Priming and activation are separate; dietary silicon is not the particle stimulus. Correction record: A 2026 author correction replaces an erroneously duplicated lower-left Fig. 8c micrograph with the retrieved original. This is a figure correction, not a scientific contradiction or retraction. https://www.nature.com/articles/s41590-026-02468-9 Evidence access: Primary full text Silica crystals and aluminum salts activate the NALP3 inflammasome through phagosomal destabilization. · 2008 · https://pubmed.ncbi.nlm.nih.gov/18604214/ · DOI 10.1038/ni.1631
Complete structured claim and evidenceNoggin pretreatment suppressed silicon-associated SMAD1/5 phosphorylation, RUNX2 and collagen expression.
Experimental context and source evidence
- availability_state
- machinery_impairment Imported condition classification; unverified.
- evidence_access
- Primary abstract
- experimental_model
- Human osteoblast-like cell pharmacological experiment.
- limitations
- Noggin is a BMP antagonist, not a uniquely selective proof of BMP2 mediation.
- nutrient_topic
- Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
- plain_language
- Blocking BMP signaling weakened the response.
- primary_references
- Biological Silicon Stimulates Collagen Type 1 and Osteocalcin Synthesis in Human Osteoblast-Like Cells Through the BMP-2/Smad/RUNX2 Signaling Pathway. · 2016 · https://pubmed.ncbi.nlm.nih.gov/27025722/ · DOI 10.1007/s12011-016-0686-3
- trigger_kind
- machinery_impairment Imported condition classification; unverified.
Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 160–166
AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Human osteoblast-like cell pharmacological experiment. · source_derived_draft · unverified_draft
## silica-noggin-block Blocking BMP signaling weakened the response. Noggin pretreatment suppressed silicon-associated SMAD1/5 phosphorylation, RUNX2 and collagen expression. Model: Human osteoblast-like cell pharmacological experiment. Limitations: Noggin is a BMP antagonist, not a uniquely selective proof of BMP2 mediation. Evidence access: Primary abstract Biological Silicon Stimulates Collagen Type 1 and Osteocalcin Synthesis in Human Osteoblast-Like Cells Through the BMP-2/Smad/RUNX2 Signaling Pathway. · 2016 · https://pubmed.ncbi.nlm.nih.gov/27025722/ · DOI 10.1007/s12011-016-0686-3
Complete structured claim and evidenceCybb/gp91phox-deficient macrophages retained silica-triggered inflammasome responses.
Experimental context and source evidence
- evidence_access
- Primary full text
- experimental_model
- Mouse macrophage genetic comparison.
- limitations
- Does not exclude every ROS source or establish NADPH depletion. Correction record: A 2026 author correction replaces an erroneously duplicated lower-left Fig. 8c micrograph with the retrieved original. This is a figure correction, not a scientific contradiction or retraction. https://www.nature.com/articles/s41590-026-02468-9
- nutrient_topic
- Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
- plain_language
- The phagocyte NADPH oxidase burst was not obligatory in this model.
- primary_references
- Silica crystals and aluminum salts activate the NALP3 inflammasome through phagosomal destabilization. · 2008 · https://pubmed.ncbi.nlm.nih.gov/18604214/ · DOI 10.1038/ni.1631
Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 456–462
AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Mouse macrophage genetic comparison. · source_derived_draft · unverified_draft
## silica-nox2-null The phagocyte NADPH oxidase burst was not obligatory in this model. Cybb/gp91phox-deficient macrophages retained silica-triggered inflammasome responses. Model: Mouse macrophage genetic comparison. Limitations: Does not exclude every ROS source or establish NADPH depletion. Correction record: A 2026 author correction replaces an erroneously duplicated lower-left Fig. 8c micrograph with the retrieved original. This is a figure correction, not a scientific contradiction or retraction. https://www.nature.com/articles/s41590-026-02468-9 Evidence access: Primary full text Silica crystals and aluminum salts activate the NALP3 inflammasome through phagosomal destabilization. · 2008 · https://pubmed.ncbi.nlm.nih.gov/18604214/ · DOI 10.1038/ni.1631
Complete structured claim and evidenceOligomeric silica reduced aluminum tracer availability by 67% in the three-person comparison.
Experimental context and source evidence
- evidence_access
- Primary abstract
- experimental_model
- Human aluminum-26 tracer study; 17 mg silica preparation as reported.
- limitations
- Very small study; does not establish treatment of aluminum toxicity.
- nutrient_topic
- Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
- plain_language
- A less readily absorbed polymer can bind aluminum in the gut.
- primary_references
- Oligomeric but not monomeric silica prevents aluminum absorption in humans. · 2000 · https://pubmed.ncbi.nlm.nih.gov/10731501/ · DOI 10.1093/ajcn/71.4.944
Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 88–94
AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Human aluminum-26 tracer study; 17 mg silica preparation as reported. · source_derived_draft · unverified_draft
## silica-oligomer-aluminum A less readily absorbed polymer can bind aluminum in the gut. Oligomeric silica reduced aluminum tracer availability by 67% in the three-person comparison. Model: Human aluminum-26 tracer study; 17 mg silica preparation as reported. Limitations: Very small study; does not establish treatment of aluminum toxicity. Evidence access: Primary abstract Oligomeric but not monomeric silica prevents aluminum absorption in humans. · 2000 · https://pubmed.ncbi.nlm.nih.gov/10731501/ · DOI 10.1093/ajcn/71.4.944
Complete structured claim and evidenceMedian minimum uptake estimated from urine was 50.3% in eight volunteers receiving orthosilicic acid.
Experimental context and source evidence
- evidence_access
- Primary abstract
- experimental_model
- Water containing 27–55 mg Si/L; small human kinetic study.
- limitations
- Urinary recovery is a lower-bound estimate, not direct intracellular measurement.
- nutrient_topic
- Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
- plain_language
- A substantial fraction of soluble silicon entered the body.
- primary_references
- Silicic acid: its gastrointestinal uptake and urinary excretion in man and effects on aluminium excretion. · 1999 · https://pubmed.ncbi.nlm.nih.gov/10612067/ · DOI 10.1016/s0162-0134(99)00126-9
Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 64–70
AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Water containing 27–55 mg Si/L; small human kinetic study. · source_derived_draft · unverified_draft
## silica-oral-uptake A substantial fraction of soluble silicon entered the body. Median minimum uptake estimated from urine was 50.3% in eight volunteers receiving orthosilicic acid. Model: Water containing 27–55 mg Si/L; small human kinetic study. Limitations: Urinary recovery is a lower-bound estimate, not direct intracellular measurement. Evidence access: Primary abstract Silicic acid: its gastrointestinal uptake and urinary excretion in man and effects on aluminium excretion. · 1999 · https://pubmed.ncbi.nlm.nih.gov/10612067/ · DOI 10.1016/s0162-0134(99)00126-9
Complete structured claim and evidenceAt 1,700 micromolar orthosilicic acid, Saos-2 colony survival was about 20% below control, with reduced proliferation/adhesion.
Experimental context and source evidence
- evidence_access
- Primary abstract
- experimental_model
- Human osteoblast-like culture comparison, up to solubility limit.
- limitations
- Different concentration and endpoints from low-dose collagen studies; not a fabricated contradiction.
- nutrient_topic
- Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
- plain_language
- Higher exposure was not uniformly beneficial.
- primary_references
- Divergent effects of orthosilicic acid and dimethylsilanediol on cell survival and adhesion in human osteoblast-like cells. · 2008 · https://pubmed.ncbi.nlm.nih.gov/18755397/ · DOI 10.1016/j.jtemb.2008.02.001
Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 200–206
AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Human osteoblast-like culture comparison, up to solubility limit. · source_derived_draft · unverified_draft
## silica-osa-high-exposure Higher exposure was not uniformly beneficial. At 1,700 micromolar orthosilicic acid, Saos-2 colony survival was about 20% below control, with reduced proliferation/adhesion. Model: Human osteoblast-like culture comparison, up to solubility limit. Limitations: Different concentration and endpoints from low-dose collagen studies; not a fabricated contradiction. Evidence access: Primary abstract Divergent effects of orthosilicic acid and dimethylsilanediol on cell survival and adhesion in human osteoblast-like cells. · 2008 · https://pubmed.ncbi.nlm.nih.gov/18755397/ · DOI 10.1016/j.jtemb.2008.02.001
Complete structured claim and evidenceThe silicon preparation lowered Tartrate-resistant acid phosphatase mRNA at 48 and 72 hours.
Experimental context and source evidence
- evidence_access
- Primary full text
- experimental_model
- Human RANKL-stimulated CD14+ cultures, 50 micrograms Si/mL.
- limitations
- Transcript abundance is not direct inhibition of the protein.
- nutrient_topic
- Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
- plain_language
- A specific osteoclast marker changed during differentiation.
- primary_references
- Orthosilicic acid inhibits human osteoclast differentiation and bone resorption. · 2024 · https://pubmed.ncbi.nlm.nih.gov/39405281/ · DOI 10.1371/journal.pone.0312169
Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 232–238
AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Human RANKL-stimulated CD14+ cultures, 50 micrograms Si/mL. · source_derived_draft · unverified_draft
## silica-osteoclast-acp5 A specific osteoclast marker changed during differentiation. The silicon preparation lowered Tartrate-resistant acid phosphatase mRNA at 48 and 72 hours. Model: Human RANKL-stimulated CD14+ cultures, 50 micrograms Si/mL. Limitations: Transcript abundance is not direct inhibition of the protein. Evidence access: Primary full text Orthosilicic acid inhibits human osteoclast differentiation and bone resorption. · 2024 · https://pubmed.ncbi.nlm.nih.gov/39405281/ · DOI 10.1371/journal.pone.0312169
Complete structured claim and evidenceAQP9 mRNA increased significantly at 72 hours during silicon exposure.
Experimental context and source evidence
- evidence_access
- Primary full text
- experimental_model
- Human CD14+ osteoclast cultures.
- limitations
- No AQP9 loss-of-function test demonstrated that it mediated the resorption effect.
- nutrient_topic
- Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
- plain_language
- Transporter expression changed even while differentiation markers fell.
- primary_references
- Orthosilicic acid inhibits human osteoclast differentiation and bone resorption. · 2024 · https://pubmed.ncbi.nlm.nih.gov/39405281/ · DOI 10.1371/journal.pone.0312169
Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 256–262
AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Human CD14+ osteoclast cultures. · source_derived_draft · unverified_draft
## silica-osteoclast-aqp9 Transporter expression changed even while differentiation markers fell. AQP9 mRNA increased significantly at 72 hours during silicon exposure. Model: Human CD14+ osteoclast cultures. Limitations: No AQP9 loss-of-function test demonstrated that it mediated the resorption effect. Evidence access: Primary full text Orthosilicic acid inhibits human osteoclast differentiation and bone resorption. · 2024 · https://pubmed.ncbi.nlm.nih.gov/39405281/ · DOI 10.1371/journal.pone.0312169
Complete structured claim and evidenceThe silicon preparation lowered Calcitonin receptor mRNA at 48 hours.
Experimental context and source evidence
- evidence_access
- Primary full text
- experimental_model
- Human RANKL-stimulated CD14+ cultures, 50 micrograms Si/mL.
- limitations
- Transcript abundance is not direct inhibition of the protein.
- nutrient_topic
- Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
- plain_language
- A specific osteoclast marker changed during differentiation.
- primary_references
- Orthosilicic acid inhibits human osteoclast differentiation and bone resorption. · 2024 · https://pubmed.ncbi.nlm.nih.gov/39405281/ · DOI 10.1371/journal.pone.0312169
Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 240–246
AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Human RANKL-stimulated CD14+ cultures, 50 micrograms Si/mL. · source_derived_draft · unverified_draft
## silica-osteoclast-calcr A specific osteoclast marker changed during differentiation. The silicon preparation lowered Calcitonin receptor mRNA at 48 hours. Model: Human RANKL-stimulated CD14+ cultures, 50 micrograms Si/mL. Limitations: Transcript abundance is not direct inhibition of the protein. Evidence access: Primary full text Orthosilicic acid inhibits human osteoclast differentiation and bone resorption. · 2024 · https://pubmed.ncbi.nlm.nih.gov/39405281/ · DOI 10.1371/journal.pone.0312169
Complete structured claim and evidenceThe silicon preparation lowered Cathepsin K mRNA at 48 and 72 hours.
Experimental context and source evidence
- evidence_access
- Primary full text
- experimental_model
- Human RANKL-stimulated CD14+ cultures, 50 micrograms Si/mL.
- limitations
- Transcript abundance is not direct inhibition of the protein.
- nutrient_topic
- Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
- plain_language
- A specific osteoclast marker changed during differentiation.
- primary_references
- Orthosilicic acid inhibits human osteoclast differentiation and bone resorption. · 2024 · https://pubmed.ncbi.nlm.nih.gov/39405281/ · DOI 10.1371/journal.pone.0312169
Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 224–230
AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Human RANKL-stimulated CD14+ cultures, 50 micrograms Si/mL. · source_derived_draft · unverified_draft
## silica-osteoclast-ctsk A specific osteoclast marker changed during differentiation. The silicon preparation lowered Cathepsin K mRNA at 48 and 72 hours. Model: Human RANKL-stimulated CD14+ cultures, 50 micrograms Si/mL. Limitations: Transcript abundance is not direct inhibition of the protein. Evidence access: Primary full text Orthosilicic acid inhibits human osteoclast differentiation and bone resorption. · 2024 · https://pubmed.ncbi.nlm.nih.gov/39405281/ · DOI 10.1371/journal.pone.0312169
Complete structured claim and evidenceThe silicon preparation lowered DC-STAMP mRNA at 48 and 96 hours.
Experimental context and source evidence
- evidence_access
- Primary full text
- experimental_model
- Human RANKL-stimulated CD14+ cultures, 50 micrograms Si/mL.
- limitations
- Transcript abundance is not direct inhibition of the protein.
- nutrient_topic
- Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
- plain_language
- A specific osteoclast marker changed during differentiation.
- primary_references
- Orthosilicic acid inhibits human osteoclast differentiation and bone resorption. · 2024 · https://pubmed.ncbi.nlm.nih.gov/39405281/ · DOI 10.1371/journal.pone.0312169
Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 248–254
AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Human RANKL-stimulated CD14+ cultures, 50 micrograms Si/mL. · source_derived_draft · unverified_draft
## silica-osteoclast-dcstamp A specific osteoclast marker changed during differentiation. The silicon preparation lowered DC-STAMP mRNA at 48 and 96 hours. Model: Human RANKL-stimulated CD14+ cultures, 50 micrograms Si/mL. Limitations: Transcript abundance is not direct inhibition of the protein. Evidence access: Primary full text Orthosilicic acid inhibits human osteoclast differentiation and bone resorption. · 2024 · https://pubmed.ncbi.nlm.nih.gov/39405281/ · DOI 10.1371/journal.pone.0312169
Complete structured claim and evidenceThe 75%-OSA silicon preparation reduced RANKL-stimulated TRAP-positive multinucleated human osteoclasts.
Experimental context and source evidence
- evidence_access
- Primary full text
- experimental_model
- Human CD14+ monocytes, M-CSF and recombinant mouse RANKL; 50 micrograms Si/mL.
- limitations
- About 1.8 mM total Si, not a normal plasma exposure or chemically pure OSA.
- nutrient_topic
- Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
- plain_language
- Fewer bone-resorbing cells formed under these culture conditions.
- primary_references
- Orthosilicic acid inhibits human osteoclast differentiation and bone resorption. · 2024 · https://pubmed.ncbi.nlm.nih.gov/39405281/ · DOI 10.1371/journal.pone.0312169
Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 216–222
AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Human CD14+ monocytes, M-CSF and recombinant mouse RANKL; 50 micrograms Si/mL. · source_derived_draft · unverified_draft
## silica-osteoclast-differentiation Fewer bone-resorbing cells formed under these culture conditions. The 75%-OSA silicon preparation reduced RANKL-stimulated TRAP-positive multinucleated human osteoclasts. Model: Human CD14+ monocytes, M-CSF and recombinant mouse RANKL; 50 micrograms Si/mL. Limitations: About 1.8 mM total Si, not a normal plasma exposure or chemically pure OSA. Evidence access: Primary full text Orthosilicic acid inhibits human osteoclast differentiation and bone resorption. · 2024 · https://pubmed.ncbi.nlm.nih.gov/39405281/ · DOI 10.1371/journal.pone.0312169
Complete structured claim and evidenceSilicon treatment reduced resorption pits and released type I collagen fragments on bone slices.
Experimental context and source evidence
- evidence_access
- Primary full text
- experimental_model
- Human osteoclast bone-disc assays; 50 micrograms Si/mL.
- limitations
- Not demonstrated clinical fracture prevention.
- nutrient_topic
- Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
- plain_language
- The study measured matrix breakdown as well as cell markers.
- primary_references
- Orthosilicic acid inhibits human osteoclast differentiation and bone resorption. · 2024 · https://pubmed.ncbi.nlm.nih.gov/39405281/ · DOI 10.1371/journal.pone.0312169
Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 264–270
AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Human osteoclast bone-disc assays; 50 micrograms Si/mL. · source_derived_draft · unverified_draft
## silica-osteoclast-resorption The study measured matrix breakdown as well as cell markers. Silicon treatment reduced resorption pits and released type I collagen fragments on bone slices. Model: Human osteoclast bone-disc assays; 50 micrograms Si/mL. Limitations: Not demonstrated clinical fracture prevention. Evidence access: Primary full text Orthosilicic acid inhibits human osteoclast differentiation and bone resorption. · 2024 · https://pubmed.ncbi.nlm.nih.gov/39405281/ · DOI 10.1371/journal.pone.0312169
Complete structured claim and evidenceNFS-rich silica strongly adsorbed zwitterionic phospholipid assemblies and disrupted their order more than negatively charged liposomes.
Experimental context and source evidence
- evidence_access
- Primary full text
- experimental_model
- Model membranes and computational recognition analysis.
- limitations
- Membrane interaction is not evidence that choline intake increases silica injury or protects against it.
- nutrient_topic
- Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
- plain_language
- The phosphocholine headgroup creates a molecular link to membrane composition.
- primary_references
- Molecular recognition between membrane epitopes and nearly free surface silanols explains silica membranolytic activity. · 2022 · https://pubmed.ncbi.nlm.nih.gov/35738078/ · DOI 10.1016/j.colsurfb.2022.112625
Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 400–406
AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Model membranes and computational recognition analysis. · source_derived_draft · unverified_draft
## silica-phosphocholine-recognition The phosphocholine headgroup creates a molecular link to membrane composition. NFS-rich silica strongly adsorbed zwitterionic phospholipid assemblies and disrupted their order more than negatively charged liposomes. Model: Model membranes and computational recognition analysis. Limitations: Membrane interaction is not evidence that choline intake increases silica injury or protects against it. Evidence access: Primary full text Molecular recognition between membrane epitopes and nearly free surface silanols explains silica membranolytic activity. · 2022 · https://pubmed.ncbi.nlm.nih.gov/35738078/ · DOI 10.1016/j.colsurfb.2022.112625
Complete structured claim and evidenceOrthosilicic acid increased PI3K, phosphorylated Akt and mTOR together with osteogenic markers.
Experimental context and source evidence
- evidence_access
- Primary abstract
- experimental_model
- Human osteoblast-like cell study.
- limitations
- No direct binding target or dietary requirement is established.
- nutrient_topic
- Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
- plain_language
- A growth-related pathway accompanied matrix production.
- primary_references
- Orthosilicic Acid Accelerates Bone Formation in Human Osteoblast-Like Cells Through the PI3K-Akt-mTOR Pathway. · 2019 · https://pubmed.ncbi.nlm.nih.gov/30421162/ · DOI 10.1007/s12011-018-1574-9
Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 168–174
AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Human osteoblast-like cell study. · source_derived_draft · unverified_draft
## silica-pi3k-mtor A growth-related pathway accompanied matrix production. Orthosilicic acid increased PI3K, phosphorylated Akt and mTOR together with osteogenic markers. Model: Human osteoblast-like cell study. Limitations: No direct binding target or dietary requirement is established. Evidence access: Primary abstract Orthosilicic Acid Accelerates Bone Formation in Human Osteoblast-Like Cells Through the PI3K-Akt-mTOR Pathway. · 2019 · https://pubmed.ncbi.nlm.nih.gov/30421162/ · DOI 10.1007/s12011-018-1574-9
Complete structured claim and evidenceHigh extracellular potassium blocked silica-induced caspase-1 processing and IL-1 beta release, including during low-dose uptake blockade.
Experimental context and source evidence
- evidence_access
- Primary full text
- experimental_model
- Mouse macrophages; 130 mM KCl experimental condition.
- limitations
- Not a potassium supplement treatment; no specific channel identity was established.
- nutrient_topic
- Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
- plain_language
- The potassium gradient gates this inflammatory response.
- primary_references
- Activation of NLRP3 inflammasome by crystalline structures via cell surface contact. · 2014 · https://pubmed.ncbi.nlm.nih.gov/25445147/ · DOI 10.1038/srep07281
Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 480–486
AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Mouse macrophages; 130 mM KCl experimental condition. · source_derived_draft · unverified_draft
## silica-potassium-gate The potassium gradient gates this inflammatory response. High extracellular potassium blocked silica-induced caspase-1 processing and IL-1 beta release, including during low-dose uptake blockade. Model: Mouse macrophages; 130 mM KCl experimental condition. Limitations: Not a potassium supplement treatment; no specific channel identity was established. Evidence access: Primary full text Activation of NLRP3 inflammasome by crystalline structures via cell surface contact. · 2014 · https://pubmed.ncbi.nlm.nih.gov/25445147/ · DOI 10.1038/srep07281
Complete structured claim and evidenceLow-silicon diets reduced hydroxyproline in rat bone and wound sponges relative to supplemented diets.
Experimental context and source evidence
- availability_state
- nutrient_deficiency Imported condition classification; unverified.
- evidence_access
- Primary abstract
- experimental_model
- Basal diets 2 or 2.6 micrograms Si/g; comparison added 10 micrograms Si/g as sodium metasilicate.
- limitations
- No validated human deficiency syndrome or blood threshold follows.
- nutrient_topic
- Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
- plain_language
- An animal low-intake model altered collagen-related endpoints.
- primary_references
- Silicon deprivation decreases collagen formation in wounds and bone, and ornithine transaminase enzyme activity in liver. · 2002 · https://pubmed.ncbi.nlm.nih.gov/12462748/ · DOI 10.1385/bter:89:3:251
- trigger_kind
- nutrient_deficiency Imported condition classification; unverified.
Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 352–358
AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Basal diets 2 or 2.6 micrograms Si/g; comparison added 10 micrograms Si/g as sodium metasilicate. · source_derived_draft · unverified_draft
## silica-rat-deprivation-collagen An animal low-intake model altered collagen-related endpoints. Low-silicon diets reduced hydroxyproline in rat bone and wound sponges relative to supplemented diets. Model: Basal diets 2 or 2.6 micrograms Si/g; comparison added 10 micrograms Si/g as sodium metasilicate. Limitations: No validated human deficiency syndrome or blood threshold follows. Evidence access: Primary abstract Silicon deprivation decreases collagen formation in wounds and bone, and ornithine transaminase enzyme activity in liver. · 2002 · https://pubmed.ncbi.nlm.nih.gov/12462748/ · DOI 10.1385/bter:89:3:251
Complete structured claim and evidenceRat liver ornithine aminotransferase activity decreased with silicon deprivation.
Experimental context and source evidence
- availability_state
- nutrient_deficiency Imported condition classification; unverified.
- evidence_access
- Primary abstract
- experimental_model
- Rat dietary comparison; liver enzyme assay.
- limitations
- Activity change does not prove silicon is an OAT cofactor or a direct link to vitamin B6 depletion.
- nutrient_topic
- Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
- plain_language
- A proline-related metabolic enzyme changed alongside collagen endpoints.
- primary_references
- Silicon deprivation decreases collagen formation in wounds and bone, and ornithine transaminase enzyme activity in liver. · 2002 · https://pubmed.ncbi.nlm.nih.gov/12462748/ · DOI 10.1385/bter:89:3:251
- trigger_kind
- nutrient_deficiency Imported condition classification; unverified.
Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 360–366
AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Rat dietary comparison; liver enzyme assay. · source_derived_draft · unverified_draft
## silica-rat-oat A proline-related metabolic enzyme changed alongside collagen endpoints. Rat liver ornithine aminotransferase activity decreased with silicon deprivation. Model: Rat dietary comparison; liver enzyme assay. Limitations: Activity change does not prove silicon is an OAT cofactor or a direct link to vitamin B6 depletion. Evidence access: Primary abstract Silicon deprivation decreases collagen formation in wounds and bone, and ornithine transaminase enzyme activity in liver. · 2002 · https://pubmed.ncbi.nlm.nih.gov/12462748/ · DOI 10.1385/bter:89:3:251
Complete structured claim and evidenceReported silicon renal clearance was 82–96 mL/min and correlated with creatinine clearance.
Experimental context and source evidence
- evidence_access
- Primary abstract
- experimental_model
- Healthy volunteer kinetics.
- limitations
- No universal tissue sufficiency threshold follows from serum or urine silicon.
- nutrient_topic
- Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
- plain_language
- Kidney function affects measured silicon handling.
- primary_references
- Silicic acid: its gastrointestinal uptake and urinary excretion in man and effects on aluminium excretion. · 1999 · https://pubmed.ncbi.nlm.nih.gov/10612067/ · DOI 10.1016/s0162-0134(99)00126-9
Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 72–78
AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Healthy volunteer kinetics. · source_derived_draft · unverified_draft
## silica-renal-clearance Kidney function affects measured silicon handling. Reported silicon renal clearance was 82–96 mL/min and correlated with creatinine clearance. Model: Healthy volunteer kinetics. Limitations: No universal tissue sufficiency threshold follows from serum or urine silicon. Evidence access: Primary abstract Silicic acid: its gastrointestinal uptake and urinary excretion in man and effects on aluminium excretion. · 1999 · https://pubmed.ncbi.nlm.nih.gov/10612067/ · DOI 10.1016/s0162-0134(99)00126-9
Complete structured claim and evidenceParticle surface treatments linked nearly free silanols to membranolysis and inflammatory activity.
Experimental context and source evidence
- evidence_access
- Primary full text
- experimental_model
- Characterized quartz/amorphous particles, membrane assays, macrophages and rat exposure program.
- limitations
- Surface motif is not a dissolved nutrient species; no oral-dose inference.
- nutrient_topic
- Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
- plain_language
- Surface chemistry helps explain why silica preparations differ.
- primary_references
- Nearly free surface silanols are the critical molecular moieties that initiate the toxicity of silica particles. · 2020 · https://pubmed.ncbi.nlm.nih.gov/33097669/ · DOI 10.1073/pnas.2008006117
Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 392–398
AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Characterized quartz/amorphous particles, membrane assays, macrophages and rat exposure program. · source_derived_draft · unverified_draft
## silica-silanol-membrane Surface chemistry helps explain why silica preparations differ. Particle surface treatments linked nearly free silanols to membranolysis and inflammatory activity. Model: Characterized quartz/amorphous particles, membrane assays, macrophages and rat exposure program. Limitations: Surface motif is not a dissolved nutrient species; no oral-dose inference. Evidence access: Primary full text Nearly free surface silanols are the critical molecular moieties that initiate the toxicity of silica particles. · 2020 · https://pubmed.ncbi.nlm.nih.gov/33097669/ · DOI 10.1073/pnas.2008006117
Complete structured claim and evidenceOrthosilicic acid increased phosphorylated SMAD1/5 and RUNX2 expression alongside osteogenic markers.
Experimental context and source evidence
- evidence_access
- Primary abstract
- experimental_model
- Human osteoblast-like cell lines, 10 micromolar exposure.
- limitations
- Marker regulation does not prove each edge by direct binding.
- nutrient_topic
- Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
- plain_language
- The response extended to downstream bone-development regulators.
- primary_references
- Biological Silicon Stimulates Collagen Type 1 and Osteocalcin Synthesis in Human Osteoblast-Like Cells Through the BMP-2/Smad/RUNX2 Signaling Pathway. · 2016 · https://pubmed.ncbi.nlm.nih.gov/27025722/ · DOI 10.1007/s12011-016-0686-3
Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 152–158
AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Human osteoblast-like cell lines, 10 micromolar exposure. · source_derived_draft · unverified_draft
## silica-smad-runx2 The response extended to downstream bone-development regulators. Orthosilicic acid increased phosphorylated SMAD1/5 and RUNX2 expression alongside osteogenic markers. Model: Human osteoblast-like cell lines, 10 micromolar exposure. Limitations: Marker regulation does not prove each edge by direct binding. Evidence access: Primary abstract Biological Silicon Stimulates Collagen Type 1 and Osteocalcin Synthesis in Human Osteoblast-Like Cells Through the BMP-2/Smad/RUNX2 Signaling Pathway. · 2016 · https://pubmed.ncbi.nlm.nih.gov/27025722/ · DOI 10.1007/s12011-016-0686-3
Complete structured claim and evidenceCytochalasin D blocked silica uptake and IL-1 beta release, supporting a phagocytosis-dependent interpretation.
Experimental context and source evidence
- availability_state
- machinery_impairment Imported condition classification; unverified.
- evidence_access
- Primary full text
- experimental_model
- Mouse macrophages; related human PBMC result separately reported in the paper.
- limitations
- Inhibitor dose and non-uptake effects require comparison with later low-dose experiments. Correction record: A 2026 author correction replaces an erroneously duplicated lower-left Fig. 8c micrograph with the retrieved original. This is a figure correction, not a scientific contradiction or retraction. https://www.nature.com/articles/s41590-026-02468-9
- nutrient_topic
- Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
- plain_language
- Blocking engulfment also blocked inflammatory output in this experiment.
- primary_references
- Silica crystals and aluminum salts activate the NALP3 inflammasome through phagosomal destabilization. · 2008 · https://pubmed.ncbi.nlm.nih.gov/18604214/ · DOI 10.1038/ni.1631
- trigger_kind
- machinery_impairment Imported condition classification; unverified.
Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 432–438
AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Mouse macrophages; related human PBMC result separately reported in the paper. · source_derived_draft · unverified_draft
## silica-uptake-block-2008 Blocking engulfment also blocked inflammatory output in this experiment. Cytochalasin D blocked silica uptake and IL-1 beta release, supporting a phagocytosis-dependent interpretation. Model: Mouse macrophages; related human PBMC result separately reported in the paper. Limitations: Inhibitor dose and non-uptake effects require comparison with later low-dose experiments. Correction record: A 2026 author correction replaces an erroneously duplicated lower-left Fig. 8c micrograph with the retrieved original. This is a figure correction, not a scientific contradiction or retraction. https://www.nature.com/articles/s41590-026-02468-9 Evidence access: Primary full text Silica crystals and aluminum salts activate the NALP3 inflammasome through phagosomal destabilization. · 2008 · https://pubmed.ncbi.nlm.nih.gov/18604214/ · DOI 10.1038/ni.1631
Complete structured claim and evidenceLow-dose cytochalasin D blocked silica engulfment while preserving caspase-1 processing and IL-1 beta release.
Experimental context and source evidence
- evidence_access
- Primary full text
- experimental_model
- Mouse bone-marrow macrophages; 0.25–0.5 micromolar cytochalasin D.
- limitations
- Immobilized epoxy-crystal experiments used MSU, not silica; do not transfer that detail between materials.
- nutrient_topic
- Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
- plain_language
- Surface-associated crystals could still trigger a response when uptake was blocked.
- primary_references
- Activation of NLRP3 inflammasome by crystalline structures via cell surface contact. · 2014 · https://pubmed.ncbi.nlm.nih.gov/25445147/ · DOI 10.1038/srep07281
Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 464–470
AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Mouse bone-marrow macrophages; 0.25–0.5 micromolar cytochalasin D. · source_derived_draft · unverified_draft
## silica-uptake-block-2014 Surface-associated crystals could still trigger a response when uptake was blocked. Low-dose cytochalasin D blocked silica engulfment while preserving caspase-1 processing and IL-1 beta release. Model: Mouse bone-marrow macrophages; 0.25–0.5 micromolar cytochalasin D. Limitations: Immobilized epoxy-crystal experiments used MSU, not silica; do not transfer that detail between materials. Evidence access: Primary full text Activation of NLRP3 inflammasome by crystalline structures via cell surface contact. · 2014 · https://pubmed.ncbi.nlm.nih.gov/25445147/ · DOI 10.1038/srep07281
Complete structured claim and evidence
The events it takes part in
A mechanism often involves more than two components. These are the full events, with every participant and its role.
Situations it appears in
Low-supply and faulty-machinery situations recorded in the chapters where this component plays a part.
In the sources
Preserved passages that mention this component, quoted exactly. Open one to read it in context.
Open hypotheses
Proposed ideas that involve this component. They are labeled as hypotheses and do not change any recorded statement.
This is a research prototype built from draft material. It is not medical advice, and its statements still await verification against the original studies.