Component

Silica and soluble silicon

A collection spanning soluble silicon chemistry and silica particles. Orthosilicic acid transport, connective-tissue responses and particle injury retain separate molecular identities, routes and experimental exposures.

67 recorded relationships. Experimental role, claim status and evidence remain attached to each record.

How nutrients influence it

Every nutrient with a recorded effect on this component, credited to the nutrient that acted rather than the chapter that recorded it. Open a nutrient to see the findings and the conditions they were measured under.

How nutrients reach it in more than one step

Chains of two or more recorded steps that end here, grouped by the nutrient they start from. Each step is a separate finding, so a chain is a route a mechanism could take, not proof that it does.

Tracing routes…

What it does

Every recorded relationship this component is part of, grouped by its role. Plain wording comes first; the technical statement follows.

Recorded relationships

Where it participates (unsigned role)

  1. Orthosilicic acid in water did not significantly increase endogenous aluminum excretion over 32 hours in five volunteers.

    Experimental context and source evidence
    evidence_access
    Primary abstract
    experimental_model
    Water dosing, small human kinetic study.
    limitations
    Different matrix, baseline aluminum and timing may matter; urinary output is not a measurement of brain aluminum.
    nutrient_topic
    Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
    plain_language
    A separate human study did not reproduce increased aluminum clearance.
    primary_references
    Silicic acid: its gastrointestinal uptake and urinary excretion in man and effects on aluminium excretion. · 1999 · https://pubmed.ncbi.nlm.nih.gov/10612067/ · DOI 10.1016/s0162-0134(99)00126-9

    Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 112–118

    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Water dosing, small human kinetic study. · source_derived_draft · unverified_draft

    ## silica-aluminum-urine-null A separate human study did not reproduce increased aluminum clearance. Orthosilicic acid in water did not significantly increase endogenous aluminum excretion over 32 hours in five volunteers. Model: Water dosing, small human kinetic study. Limitations: Different matrix, baseline aluminum and timing may matter; urinary output is not a measurement of brain aluminum. Evidence access: Primary abstract Silicic acid: its gastrointestinal uptake and urinary excretion in man and effects on aluminium excretion. · 1999 · https://pubmed.ncbi.nlm.nih.gov/10612067/ · DOI 10.1016/s0162-0134(99)00126-9
    Complete structured claim and evidence
  2. Beer-derived monosilicic acid ingestion was accompanied by increased urinary aluminum in this study.

    Experimental context and source evidence
    evidence_access
    Primary abstract
    experimental_model
    Healthy volunteers; beverage matrix and isotope experiments.
    limitations
    Kidney-lumen complex formation and reduced reabsorption were proposed, not directly established molecular targets.
    nutrient_topic
    Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
    plain_language
    A renal effect was proposed in addition to intestinal binding.
    primary_references
    The role of silicic acid in the renal excretion of aluminium. · 1996 · https://pubmed.ncbi.nlm.nih.gov/8726215/

    Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 104–110

    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Healthy volunteers; beverage matrix and isotope experiments. · source_derived_draft · unverified_draft

    ## silica-aluminum-urine-positive A renal effect was proposed in addition to intestinal binding. Beer-derived monosilicic acid ingestion was accompanied by increased urinary aluminum in this study. Model: Healthy volunteers; beverage matrix and isotope experiments. Limitations: Kidney-lumen complex formation and reduced reabsorption were proposed, not directly established molecular targets. Evidence access: Primary abstract The role of silicic acid in the renal excretion of aluminium. · 1996 · https://pubmed.ncbi.nlm.nih.gov/8726215/
    Complete structured claim and evidence
  3. Combined AQP3/AQP7/AQP9/AQP10 RNA interference reduced silicon efflux from preloaded HEK-293 cells.

    Experimental context and source evidence
    availability_state
    machinery_impairment Imported condition classification; unverified.
    evidence_access
    Primary full text
    experimental_model
    Human HEK-293 cells, 2 mM loading and brief efflux assay.
    limitations
    Combined knockdown does not quantify each channel’s independent in-vivo contribution.
    nutrient_topic
    Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
    plain_language
    Loss of transport machinery changes silicon movement.
    primary_references
    Aquaporins Mediate Silicon Transport in Humans. · 2015 · https://pubmed.ncbi.nlm.nih.gov/26313002/ · DOI 10.1371/journal.pone.0136149
    trigger_kind
    machinery_impairment Imported condition classification; unverified.

    Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 48–54

    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Human HEK-293 cells, 2 mM loading and brief efflux assay. · source_derived_draft · unverified_draft

    ## silica-aqp-silencing Loss of transport machinery changes silicon movement. Combined AQP3/AQP7/AQP9/AQP10 RNA interference reduced silicon efflux from preloaded HEK-293 cells. Model: Human HEK-293 cells, 2 mM loading and brief efflux assay. Limitations: Combined knockdown does not quantify each channel’s independent in-vivo contribution. Evidence access: Primary full text Aquaporins Mediate Silicon Transport in Humans. · 2015 · https://pubmed.ncbi.nlm.nih.gov/26313002/ · DOI 10.1371/journal.pone.0136149
    Complete structured claim and evidence
  4. Expression of human AQP10 increased silicon transport in the tested oocyte and HEK-293 systems.

    Experimental context and source evidence
    evidence_access
    Primary full text
    experimental_model
    Human constructs in Xenopus oocytes and human HEK-293 cells.
    limitations
    Expression-system flux does not establish the dominant transporter in every human tissue.
    nutrient_topic
    Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
    plain_language
    AQP10 provides a separately identifiable route for soluble silicon.
    primary_references
    Aquaporins Mediate Silicon Transport in Humans. · 2015 · https://pubmed.ncbi.nlm.nih.gov/26313002/ · DOI 10.1371/journal.pone.0136149
    transport_effect
    raises Expression increased silicon transport in the oocyte and HEK-293 uptake systems.
    transport_pool
    the expressing cell Expression increased silicon transport in the oocyte and HEK-293 uptake systems.

    Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 40–46

    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Human constructs in Xenopus oocytes and human HEK-293 cells. · source_derived_draft · unverified_draft

    ## silica-aqp10-transport AQP10 provides a separately identifiable route for soluble silicon. Expression of human AQP10 increased silicon transport in the tested oocyte and HEK-293 systems. Model: Human constructs in Xenopus oocytes and human HEK-293 cells. Limitations: Expression-system flux does not establish the dominant transporter in every human tissue. Evidence access: Primary full text Aquaporins Mediate Silicon Transport in Humans. · 2015 · https://pubmed.ncbi.nlm.nih.gov/26313002/ · DOI 10.1371/journal.pone.0136149
    Complete structured claim and evidence
  5. Expression of human AQP3 increased silicon transport in the tested oocyte and HEK-293 systems.

    Human aquaporin 3 / AQP3 → Orthosilicic acid / Si(OH)4 source_derived_draftungraded
    Experimental context and source evidence
    evidence_access
    Primary full text
    experimental_model
    Human constructs in Xenopus oocytes and human HEK-293 cells.
    limitations
    Expression-system flux does not establish the dominant transporter in every human tissue.
    nutrient_topic
    Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
    plain_language
    AQP3 provides a separately identifiable route for soluble silicon.
    primary_references
    Aquaporins Mediate Silicon Transport in Humans. · 2015 · https://pubmed.ncbi.nlm.nih.gov/26313002/ · DOI 10.1371/journal.pone.0136149
    transport_effect
    raises Expression increased silicon transport in the oocyte and HEK-293 uptake systems.
    transport_pool
    the expressing cell Expression increased silicon transport in the oocyte and HEK-293 uptake systems.

    Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 16–22

    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Human constructs in Xenopus oocytes and human HEK-293 cells. · source_derived_draft · unverified_draft

    ## silica-aqp3-transport AQP3 provides a separately identifiable route for soluble silicon. Expression of human AQP3 increased silicon transport in the tested oocyte and HEK-293 systems. Model: Human constructs in Xenopus oocytes and human HEK-293 cells. Limitations: Expression-system flux does not establish the dominant transporter in every human tissue. Evidence access: Primary full text Aquaporins Mediate Silicon Transport in Humans. · 2015 · https://pubmed.ncbi.nlm.nih.gov/26313002/ · DOI 10.1371/journal.pone.0136149
    Complete structured claim and evidence
  6. Expression of human AQP7 increased silicon transport in the tested oocyte and HEK-293 systems.

    Human aquaporin 7 / AQP7 → Orthosilicic acid / Si(OH)4 source_derived_draftungraded
    Experimental context and source evidence
    evidence_access
    Primary full text
    experimental_model
    Human constructs in Xenopus oocytes and human HEK-293 cells.
    limitations
    Expression-system flux does not establish the dominant transporter in every human tissue.
    nutrient_topic
    Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
    plain_language
    AQP7 provides a separately identifiable route for soluble silicon.
    primary_references
    Aquaporins Mediate Silicon Transport in Humans. · 2015 · https://pubmed.ncbi.nlm.nih.gov/26313002/ · DOI 10.1371/journal.pone.0136149
    transport_effect
    raises Expression increased silicon transport in the oocyte and HEK-293 uptake systems.
    transport_pool
    the expressing cell Expression increased silicon transport in the oocyte and HEK-293 uptake systems.

    Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 24–30

    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Human constructs in Xenopus oocytes and human HEK-293 cells. · source_derived_draft · unverified_draft

    ## silica-aqp7-transport AQP7 provides a separately identifiable route for soluble silicon. Expression of human AQP7 increased silicon transport in the tested oocyte and HEK-293 systems. Model: Human constructs in Xenopus oocytes and human HEK-293 cells. Limitations: Expression-system flux does not establish the dominant transporter in every human tissue. Evidence access: Primary full text Aquaporins Mediate Silicon Transport in Humans. · 2015 · https://pubmed.ncbi.nlm.nih.gov/26313002/ · DOI 10.1371/journal.pone.0136149
    Complete structured claim and evidence
  7. Phloretin increased AQP9-mediated silicon influx under the tested hypoosmolar conditions while inhibiting water transport.

    Phloretin → Human aquaporin 9 / AQP9 source_derived_draftungraded
    Experimental context and source evidence
    evidence_access
    Primary full text
    experimental_model
    Human AQP9 in Xenopus oocytes; 0.1 mM phloretin, 2 mM silicic acid.
    limitations
    Not a demonstrated food interaction; the abstract’s phloretin-sensitive wording does not mean silicon flux was inhibited.
    nutrient_topic
    Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
    plain_language
    A transport inhibitor can affect two substrates differently.
    primary_references
    Aquaporins Mediate Silicon Transport in Humans. · 2015 · https://pubmed.ncbi.nlm.nih.gov/26313002/ · DOI 10.1371/journal.pone.0136149

    Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 56–62

    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Human AQP9 in Xenopus oocytes; 0.1 mM phloretin, 2 mM silicic acid. · source_derived_draft · unverified_draft

    ## silica-aqp9-phloretin A transport inhibitor can affect two substrates differently. Phloretin increased AQP9-mediated silicon influx under the tested hypoosmolar conditions while inhibiting water transport. Model: Human AQP9 in Xenopus oocytes; 0.1 mM phloretin, 2 mM silicic acid. Limitations: Not a demonstrated food interaction; the abstract’s phloretin-sensitive wording does not mean silicon flux was inhibited. Evidence access: Primary full text Aquaporins Mediate Silicon Transport in Humans. · 2015 · https://pubmed.ncbi.nlm.nih.gov/26313002/ · DOI 10.1371/journal.pone.0136149
    Complete structured claim and evidence
  8. Expression of human AQP9 increased silicon transport in the tested oocyte and HEK-293 systems.

    Human aquaporin 9 / AQP9 → Orthosilicic acid / Si(OH)4 source_derived_draftungraded
    Experimental context and source evidence
    evidence_access
    Primary full text
    experimental_model
    Human constructs in Xenopus oocytes and human HEK-293 cells.
    limitations
    Expression-system flux does not establish the dominant transporter in every human tissue.
    nutrient_topic
    Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
    plain_language
    AQP9 provides a separately identifiable route for soluble silicon.
    primary_references
    Aquaporins Mediate Silicon Transport in Humans. · 2015 · https://pubmed.ncbi.nlm.nih.gov/26313002/ · DOI 10.1371/journal.pone.0136149
    transport_effect
    raises Expression increased silicon transport in the oocyte and HEK-293 uptake systems.
    transport_pool
    the expressing cell Expression increased silicon transport in the oocyte and HEK-293 uptake systems.

    Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 32–38

    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Human constructs in Xenopus oocytes and human HEK-293 cells. · source_derived_draft · unverified_draft

    ## silica-aqp9-transport AQP9 provides a separately identifiable route for soluble silicon. Expression of human AQP9 increased silicon transport in the tested oocyte and HEK-293 systems. Model: Human constructs in Xenopus oocytes and human HEK-293 cells. Limitations: Expression-system flux does not establish the dominant transporter in every human tissue. Evidence access: Primary full text Aquaporins Mediate Silicon Transport in Humans. · 2015 · https://pubmed.ncbi.nlm.nih.gov/26313002/ · DOI 10.1371/journal.pone.0136149
    Complete structured claim and evidence
  9. Ten micromolar orthosilicic acid increased BMP2 expression in human osteoblast-like cells.

    Orthosilicic acid / Si(OH)4 → Human BMP2 source_derived_draftungraded
    Experimental context and source evidence
    evidence_access
    Primary abstract
    experimental_model
    Human MG-63/U2-OS cell program.
    limitations
    Expression change does not identify a direct silicon receptor.
    nutrient_topic
    Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
    plain_language
    A bone-development signal increased after exposure.
    primary_references
    Biological Silicon Stimulates Collagen Type 1 and Osteocalcin Synthesis in Human Osteoblast-Like Cells Through the BMP-2/Smad/RUNX2 Signaling Pathway. · 2016 · https://pubmed.ncbi.nlm.nih.gov/27025722/ · DOI 10.1007/s12011-016-0686-3

    Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 144–150

    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Human MG-63/U2-OS cell program. · source_derived_draft · unverified_draft

    ## silica-bmp-expression A bone-development signal increased after exposure. Ten micromolar orthosilicic acid increased BMP2 expression in human osteoblast-like cells. Model: Human MG-63/U2-OS cell program. Limitations: Expression change does not identify a direct silicon receptor. Evidence access: Primary abstract Biological Silicon Stimulates Collagen Type 1 and Osteocalcin Synthesis in Human Osteoblast-Like Cells Through the BMP-2/Smad/RUNX2 Signaling Pathway. · 2016 · https://pubmed.ncbi.nlm.nih.gov/27025722/ · DOI 10.1007/s12011-016-0686-3
    Complete structured claim and evidence
  10. CA-074-Me reduced silica-triggered IL-1 beta release, supporting a cathepsin-sensitive step.

    Experimental context and source evidence
    evidence_access
    Primary full text
    experimental_model
    Mouse macrophages; 10 micromolar CA-074-Me.
    limitations
    Pharmacology alone does not establish unique cathepsin B necessity. Correction record: A 2026 author correction replaces an erroneously duplicated lower-left Fig. 8c micrograph with the retrieved original. This is a figure correction, not a scientific contradiction or retraction. https://www.nature.com/articles/s41590-026-02468-9
    nutrient_topic
    Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
    plain_language
    A lysosomal protease inhibitor reduced inflammatory output.
    primary_references
    Silica crystals and aluminum salts activate the NALP3 inflammasome through phagosomal destabilization. · 2008 · https://pubmed.ncbi.nlm.nih.gov/18604214/ · DOI 10.1038/ni.1631

    Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 448–454

    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Mouse macrophages; 10 micromolar CA-074-Me. · source_derived_draft · unverified_draft

    ## silica-cathepsin-inhibitor A lysosomal protease inhibitor reduced inflammatory output. CA-074-Me reduced silica-triggered IL-1 beta release, supporting a cathepsin-sensitive step. Model: Mouse macrophages; 10 micromolar CA-074-Me. Limitations: Pharmacology alone does not establish unique cathepsin B necessity. Correction record: A 2026 author correction replaces an erroneously duplicated lower-left Fig. 8c micrograph with the retrieved original. This is a figure correction, not a scientific contradiction or retraction. https://www.nature.com/articles/s41590-026-02468-9 Evidence access: Primary full text Silica crystals and aluminum salts activate the NALP3 inflammasome through phagosomal destabilization. · 2008 · https://pubmed.ncbi.nlm.nih.gov/18604214/ · DOI 10.1038/ni.1631
    Complete structured claim and evidence
  11. Cathepsin-B-deficient macrophages retained crystal-induced IL-1 beta release in this study.

    Mouse cathepsin B → Mouse IL-1 beta source_derived_draftungraded
    Experimental context and source evidence
    evidence_access
    Primary full text
    experimental_model
    Mouse bone-marrow macrophages with silica/MSU comparisons.
    limitations
    Compensation and other cathepsins remain possible; no universal dismissal of lysosomal injury.
    nutrient_topic
    Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
    plain_language
    Genetic loss did not reproduce the inhibitor-based necessity claim.
    primary_references
    Activation of NLRP3 inflammasome by crystalline structures via cell surface contact. · 2014 · https://pubmed.ncbi.nlm.nih.gov/25445147/ · DOI 10.1038/srep07281

    Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 472–478

    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Mouse bone-marrow macrophages with silica/MSU comparisons. · source_derived_draft · unverified_draft

    ## silica-cathepsin-knockout Genetic loss did not reproduce the inhibitor-based necessity claim. Cathepsin-B-deficient macrophages retained crystal-induced IL-1 beta release in this study. Model: Mouse bone-marrow macrophages with silica/MSU comparisons. Limitations: Compensation and other cathepsins remain possible; no universal dismissal of lysosomal injury. Evidence access: Primary full text Activation of NLRP3 inflammasome by crystalline structures via cell surface contact. · 2014 · https://pubmed.ncbi.nlm.nih.gov/25445147/ · DOI 10.1038/srep07281
    Complete structured claim and evidence
  12. Silicon-deprived chicks showed abnormal epiphyseal cartilage and lower tibial hexosamine/collagen measures.

    Experimental context and source evidence
    availability_state
    nutrient_deficiency Imported condition classification; unverified.
    evidence_access
    Primary abstract
    experimental_model
    Four-week cockerels on casein-based diets.
    limitations
    Developmental animal model, not a human nutritional threshold.
    nutrient_topic
    Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
    plain_language
    Growing-animal cartilage was sensitive to the experimental diet.
    primary_references
    Biochemical and morphological changes associated with long bone abnormalities in silicon deficiency. · 1980 · https://pubmed.ncbi.nlm.nih.gov/7373430/ · DOI 10.1093/jn/110.5.1046
    trigger_kind
    nutrient_deficiency Imported condition classification; unverified.

    Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 368–374

    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Four-week cockerels on casein-based diets. · source_derived_draft · unverified_draft

    ## silica-chick-cartilage Growing-animal cartilage was sensitive to the experimental diet. Silicon-deprived chicks showed abnormal epiphyseal cartilage and lower tibial hexosamine/collagen measures. Model: Four-week cockerels on casein-based diets. Limitations: Developmental animal model, not a human nutritional threshold. Evidence access: Primary abstract Biochemical and morphological changes associated with long bone abnormalities in silicon deficiency. · 1980 · https://pubmed.ncbi.nlm.nih.gov/7373430/ · DOI 10.1093/jn/110.5.1046
    Complete structured claim and evidence
  13. U18666A-induced cholesterol accumulation reduced silica-induced inflammasome activation in mouse alveolar macrophages.

    Experimental context and source evidence
    evidence_access
    Primary full text
    experimental_model
    Pharmacologically altered lysosomal cholesterol handling.
    limitations
    Not evidence that raising blood cholesterol or dietary cholesterol protects the lung.
    nutrient_topic
    Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
    plain_language
    Membrane-lipid handling can modify the response to particles.
    primary_references
    Role of lysosomes in silica-induced inflammasome activation and inflammation in absence of MARCO. · 2014 · https://pubmed.ncbi.nlm.nih.gov/25054161/ · DOI 10.1155/2014/304180

    Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 496–502

    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Pharmacologically altered lysosomal cholesterol handling. · source_derived_draft · unverified_draft

    ## silica-cholesterol-lysosome Membrane-lipid handling can modify the response to particles. U18666A-induced cholesterol accumulation reduced silica-induced inflammasome activation in mouse alveolar macrophages. Model: Pharmacologically altered lysosomal cholesterol handling. Limitations: Not evidence that raising blood cholesterol or dietary cholesterol protects the lung. Evidence access: Primary full text Role of lysosomes in silica-induced inflammasome activation and inflammation in absence of MARCO. · 2014 · https://pubmed.ncbi.nlm.nih.gov/25054161/ · DOI 10.1155/2014/304180
    Complete structured claim and evidence
  14. Orthosilicic acid at 10–20 micromolar increased type I collagen synthesis in human osteoblast-like cultures.

    Orthosilicic acid / Si(OH)4 → Human type I collagen source_derived_draftungraded
    Experimental context and source evidence
    evidence_access
    Primary abstract
    experimental_model
    MG-63, HCC1 and primary human marrow-derived osteoblast-like cells.
    limitations
    Cell-culture synthesis is not demonstrated human bone strength or fracture benefit.
    nutrient_topic
    Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
    plain_language
    Bone-forming cells produced more collagen scaffold.
    primary_references
    Orthosilicic acid stimulates collagen type 1 synthesis and osteoblastic differentiation in human osteoblast-like cells in vitro. · 2003 · https://pubmed.ncbi.nlm.nih.gov/12633784/ · DOI 10.1016/s8756-3282(02)00950-x

    Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 120–126

    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · MG-63, HCC1 and primary human marrow-derived osteoblast-like cells. · source_derived_draft · unverified_draft

    ## silica-collagen-production Bone-forming cells produced more collagen scaffold. Orthosilicic acid at 10–20 micromolar increased type I collagen synthesis in human osteoblast-like cultures. Model: MG-63, HCC1 and primary human marrow-derived osteoblast-like cells. Limitations: Cell-culture synthesis is not demonstrated human bone strength or fracture benefit. Evidence access: Primary abstract Orthosilicic acid stimulates collagen type 1 synthesis and osteoblastic differentiation in human osteoblast-like cells in vitro. · 2003 · https://pubmed.ncbi.nlm.nih.gov/12633784/ · DOI 10.1016/s8756-3282(02)00950-x
    Complete structured claim and evidence
  15. Type I collagen mRNA did not increase despite greater collagen synthesis in treated MG-63 cells.

    Experimental context and source evidence
    evidence_access
    Primary abstract
    experimental_model
    Human osteosarcoma-derived MG-63 cells.
    limitations
    Translation, processing and turnover were not all separately resolved.
    nutrient_topic
    Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
    plain_language
    The measured effect was not simply more collagen-gene transcription.
    primary_references
    Orthosilicic acid stimulates collagen type 1 synthesis and osteoblastic differentiation in human osteoblast-like cells in vitro. · 2003 · https://pubmed.ncbi.nlm.nih.gov/12633784/ · DOI 10.1016/s8756-3282(02)00950-x

    Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 128–134

    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Human osteosarcoma-derived MG-63 cells. · source_derived_draft · unverified_draft

    ## silica-collagen-transcript-null The measured effect was not simply more collagen-gene transcription. Type I collagen mRNA did not increase despite greater collagen synthesis in treated MG-63 cells. Model: Human osteosarcoma-derived MG-63 cells. Limitations: Translation, processing and turnover were not all separately resolved. Evidence access: Primary abstract Orthosilicic acid stimulates collagen type 1 synthesis and osteoblastic differentiation in human osteoblast-like cells in vitro. · 2003 · https://pubmed.ncbi.nlm.nih.gov/12633784/ · DOI 10.1016/s8756-3282(02)00950-x
    Complete structured claim and evidence
  16. Thirty micromolar OSA improved HUVEC proliferation, migration and tube formation under high glucose.

    Experimental context and source evidence
    evidence_access
    Primary abstract
    experimental_model
    Human HUVEC high-glucose model.
    limitations
    Clinical diabetic wound efficacy is unestablished; accessed abstract lacks full dose-response and inhibitor details.
    nutrient_topic
    Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
    plain_language
    A recent study tested an additional stress context.
    primary_references
    Orthosilicic Acid Promotes Diabetic Wound Healing Through the PI3 K/AKT/mTOR Signaling Pathway. · 2026 · https://pubmed.ncbi.nlm.nih.gov/40517214/ · DOI 10.1007/s12011-025-04670-6

    Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 336–342

    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Human HUVEC high-glucose model. · source_derived_draft · unverified_draft

    ## silica-diabetic-endothelium A recent study tested an additional stress context. Thirty micromolar OSA improved HUVEC proliferation, migration and tube formation under high glucose. Model: Human HUVEC high-glucose model. Limitations: Clinical diabetic wound efficacy is unestablished; accessed abstract lacks full dose-response and inhibitor details. Evidence access: Primary abstract Orthosilicic Acid Promotes Diabetic Wound Healing Through the PI3 K/AKT/mTOR Signaling Pathway. · 2026 · https://pubmed.ncbi.nlm.nih.gov/40517214/ · DOI 10.1007/s12011-025-04670-6
    Complete structured claim and evidence
  17. OSA improved skin-wound healing in db/db mice, with PI3K/Akt/mTOR involvement reported.

    Experimental context and source evidence
    evidence_access
    Primary abstract
    experimental_model
    Diabetic db/db mice; primary abstract.
    limitations
    Route, formulation and complete mediation experiments require full-text follow-up; not human treatment evidence.
    nutrient_topic
    Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
    plain_language
    The research included an animal wound outcome.
    primary_references
    Orthosilicic Acid Promotes Diabetic Wound Healing Through the PI3 K/AKT/mTOR Signaling Pathway. · 2026 · https://pubmed.ncbi.nlm.nih.gov/40517214/ · DOI 10.1007/s12011-025-04670-6

    Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 344–350

    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Diabetic db/db mice; primary abstract. · source_derived_draft · unverified_draft

    ## silica-diabetic-mouse-wound The research included an animal wound outcome. OSA improved skin-wound healing in db/db mice, with PI3K/Akt/mTOR involvement reported. Model: Diabetic db/db mice; primary abstract. Limitations: Route, formulation and complete mediation experiments require full-text follow-up; not human treatment evidence. Evidence access: Primary abstract Orthosilicic Acid Promotes Diabetic Wound Healing Through the PI3 K/AKT/mTOR Signaling Pathway. · 2026 · https://pubmed.ncbi.nlm.nih.gov/40517214/ · DOI 10.1007/s12011-025-04670-6
    Complete structured claim and evidence
  18. Dimethylsilanediol had no discernible survival effect up to 50 micromolar and increased survival at higher tested doses.

    Dimethylsilanediol → Human Saos-2 colony survival source_derived_draftungraded
    Experimental context and source evidence
    evidence_access
    Primary abstract
    experimental_model
    Human osteoblast-like cell comparison.
    limitations
    Environmental silicone degradation product, not evidence that silicone polymers or supplements share this activity.
    nutrient_topic
    Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
    plain_language
    An organosilicon compound produced a different cellular response.
    primary_references
    Divergent effects of orthosilicic acid and dimethylsilanediol on cell survival and adhesion in human osteoblast-like cells. · 2008 · https://pubmed.ncbi.nlm.nih.gov/18755397/ · DOI 10.1016/j.jtemb.2008.02.001

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    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Human osteoblast-like cell comparison. · source_derived_draft · unverified_draft

    ## silica-dimethyl-form An organosilicon compound produced a different cellular response. Dimethylsilanediol had no discernible survival effect up to 50 micromolar and increased survival at higher tested doses. Model: Human osteoblast-like cell comparison. Limitations: Environmental silicone degradation product, not evidence that silicone polymers or supplements share this activity. Evidence access: Primary abstract Divergent effects of orthosilicic acid and dimethylsilanediol on cell survival and adhesion in human osteoblast-like cells. · 2008 · https://pubmed.ncbi.nlm.nih.gov/18755397/ · DOI 10.1016/j.jtemb.2008.02.001
    Complete structured claim and evidence
  19. Silicon-treated HUVECs increased catalase mRNA under the reported normal and peroxide conditions.

    Experimental context and source evidence
    evidence_access
    Primary full text
    experimental_model
    Human HUVECs, 0.5 mM silicon preparation.
    limitations
    Expression is not measured catalytic flux or proof that silicon replaces established metal cofactors.
    nutrient_topic
    Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
    plain_language
    An individual antioxidant or vascular enzyme was measured.
    primary_references
    Ionic silicon improves endothelial cells' survival under toxic oxidative stress by overexpressing angiogenic markers and antioxidant enzymes. · 2018 · https://pubmed.ncbi.nlm.nih.gov/30062712/ · DOI 10.1002/term.2744

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    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Human HUVECs, 0.5 mM silicon preparation. · source_derived_draft · unverified_draft

    ## silica-endothelial-human-catalase An individual antioxidant or vascular enzyme was measured. Silicon-treated HUVECs increased catalase mRNA under the reported normal and peroxide conditions. Model: Human HUVECs, 0.5 mM silicon preparation. Limitations: Expression is not measured catalytic flux or proof that silicon replaces established metal cofactors. Evidence access: Primary full text Ionic silicon improves endothelial cells' survival under toxic oxidative stress by overexpressing angiogenic markers and antioxidant enzymes. · 2018 · https://pubmed.ncbi.nlm.nih.gov/30062712/ · DOI 10.1002/term.2744
    Complete structured claim and evidence
  20. The 0.5 mM silicon preparation increased HIF1A expression in HUVECs with or without the tested peroxide challenge.

    Experimental context and source evidence
    evidence_access
    Primary full text
    experimental_model
    Human endothelial cultures; sodium-metasilicate-derived preparation.
    limitations
    Expression association does not establish direct activation or clinical angiogenesis.
    nutrient_topic
    Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
    plain_language
    A distinct vascular regulator changed after exposure.
    primary_references
    Ionic silicon improves endothelial cells' survival under toxic oxidative stress by overexpressing angiogenic markers and antioxidant enzymes. · 2018 · https://pubmed.ncbi.nlm.nih.gov/30062712/ · DOI 10.1002/term.2744

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    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Human endothelial cultures; sodium-metasilicate-derived preparation. · source_derived_draft · unverified_draft

    ## silica-endothelial-marker-hif1a A distinct vascular regulator changed after exposure. The 0.5 mM silicon preparation increased HIF1A expression in HUVECs with or without the tested peroxide challenge. Model: Human endothelial cultures; sodium-metasilicate-derived preparation. Limitations: Expression association does not establish direct activation or clinical angiogenesis. Evidence access: Primary full text Ionic silicon improves endothelial cells' survival under toxic oxidative stress by overexpressing angiogenic markers and antioxidant enzymes. · 2018 · https://pubmed.ncbi.nlm.nih.gov/30062712/ · DOI 10.1002/term.2744
    Complete structured claim and evidence
  21. The 0.5 mM silicon preparation increased VEGFR2 / KDR expression in HUVECs with or without the tested peroxide challenge.

    Experimental context and source evidence
    evidence_access
    Primary full text
    experimental_model
    Human endothelial cultures; sodium-metasilicate-derived preparation.
    limitations
    Expression association does not establish direct activation or clinical angiogenesis.
    nutrient_topic
    Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
    plain_language
    A distinct vascular regulator changed after exposure.
    primary_references
    Ionic silicon improves endothelial cells' survival under toxic oxidative stress by overexpressing angiogenic markers and antioxidant enzymes. · 2018 · https://pubmed.ncbi.nlm.nih.gov/30062712/ · DOI 10.1002/term.2744

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    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Human endothelial cultures; sodium-metasilicate-derived preparation. · source_derived_draft · unverified_draft

    ## silica-endothelial-marker-human-kdr A distinct vascular regulator changed after exposure. The 0.5 mM silicon preparation increased VEGFR2 / KDR expression in HUVECs with or without the tested peroxide challenge. Model: Human endothelial cultures; sodium-metasilicate-derived preparation. Limitations: Expression association does not establish direct activation or clinical angiogenesis. Evidence access: Primary full text Ionic silicon improves endothelial cells' survival under toxic oxidative stress by overexpressing angiogenic markers and antioxidant enzymes. · 2018 · https://pubmed.ncbi.nlm.nih.gov/30062712/ · DOI 10.1002/term.2744
    Complete structured claim and evidence
  22. The 0.5 mM silicon preparation increased VEGFA expression in HUVECs with or without the tested peroxide challenge.

    Experimental context and source evidence
    evidence_access
    Primary full text
    experimental_model
    Human endothelial cultures; sodium-metasilicate-derived preparation.
    limitations
    Expression association does not establish direct activation or clinical angiogenesis.
    nutrient_topic
    Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
    plain_language
    A distinct vascular regulator changed after exposure.
    primary_references
    Ionic silicon improves endothelial cells' survival under toxic oxidative stress by overexpressing angiogenic markers and antioxidant enzymes. · 2018 · https://pubmed.ncbi.nlm.nih.gov/30062712/ · DOI 10.1002/term.2744

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    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Human endothelial cultures; sodium-metasilicate-derived preparation. · source_derived_draft · unverified_draft

    ## silica-endothelial-marker-human-vegfa A distinct vascular regulator changed after exposure. The 0.5 mM silicon preparation increased VEGFA expression in HUVECs with or without the tested peroxide challenge. Model: Human endothelial cultures; sodium-metasilicate-derived preparation. Limitations: Expression association does not establish direct activation or clinical angiogenesis. Evidence access: Primary full text Ionic silicon improves endothelial cells' survival under toxic oxidative stress by overexpressing angiogenic markers and antioxidant enzymes. · 2018 · https://pubmed.ncbi.nlm.nih.gov/30062712/ · DOI 10.1002/term.2744
    Complete structured claim and evidence
  23. Silicon-treated HUVECs increased NOS3 mRNA under the reported normal and peroxide conditions.

    Experimental context and source evidence
    evidence_access
    Primary full text
    experimental_model
    Human HUVECs, 0.5 mM silicon preparation.
    limitations
    Expression is not measured catalytic flux or proof that silicon replaces established metal cofactors.
    nutrient_topic
    Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
    plain_language
    An individual antioxidant or vascular enzyme was measured.
    primary_references
    Ionic silicon improves endothelial cells' survival under toxic oxidative stress by overexpressing angiogenic markers and antioxidant enzymes. · 2018 · https://pubmed.ncbi.nlm.nih.gov/30062712/ · DOI 10.1002/term.2744

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    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Human HUVECs, 0.5 mM silicon preparation. · source_derived_draft · unverified_draft

    ## silica-endothelial-nos3 An individual antioxidant or vascular enzyme was measured. Silicon-treated HUVECs increased NOS3 mRNA under the reported normal and peroxide conditions. Model: Human HUVECs, 0.5 mM silicon preparation. Limitations: Expression is not measured catalytic flux or proof that silicon replaces established metal cofactors. Evidence access: Primary full text Ionic silicon improves endothelial cells' survival under toxic oxidative stress by overexpressing angiogenic markers and antioxidant enzymes. · 2018 · https://pubmed.ncbi.nlm.nih.gov/30062712/ · DOI 10.1002/term.2744
    Complete structured claim and evidence
  24. Silicon-treated HUVECs increased SOD1 mRNA under the reported normal and peroxide conditions.

    Experimental context and source evidence
    evidence_access
    Primary full text
    experimental_model
    Human HUVECs, 0.5 mM silicon preparation.
    limitations
    Expression is not measured catalytic flux or proof that silicon replaces established metal cofactors.
    nutrient_topic
    Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
    plain_language
    An individual antioxidant or vascular enzyme was measured.
    primary_references
    Ionic silicon improves endothelial cells' survival under toxic oxidative stress by overexpressing angiogenic markers and antioxidant enzymes. · 2018 · https://pubmed.ncbi.nlm.nih.gov/30062712/ · DOI 10.1002/term.2744

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    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Human HUVECs, 0.5 mM silicon preparation. · source_derived_draft · unverified_draft

    ## silica-endothelial-sod1 An individual antioxidant or vascular enzyme was measured. Silicon-treated HUVECs increased SOD1 mRNA under the reported normal and peroxide conditions. Model: Human HUVECs, 0.5 mM silicon preparation. Limitations: Expression is not measured catalytic flux or proof that silicon replaces established metal cofactors. Evidence access: Primary full text Ionic silicon improves endothelial cells' survival under toxic oxidative stress by overexpressing angiogenic markers and antioxidant enzymes. · 2018 · https://pubmed.ncbi.nlm.nih.gov/30062712/ · DOI 10.1002/term.2744
    Complete structured claim and evidence
  25. A 0.5 mM silicon preparation improved HUVEC viability during hydrogen-peroxide exposure.

    Experimental context and source evidence
    evidence_access
    Primary full text
    experimental_model
    Sodium-metasilicate-derived medium; 0.6 mM H2O2 challenge.
    limitations
    Authors label exposure Si4+; this is not a measured pool of free aqueous Si4+. Supraphysiological culture exposure.
    nutrient_topic
    Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
    plain_language
    Dissolved preparation altered the response to oxidative stress.
    primary_references
    Ionic silicon improves endothelial cells' survival under toxic oxidative stress by overexpressing angiogenic markers and antioxidant enzymes. · 2018 · https://pubmed.ncbi.nlm.nih.gov/30062712/ · DOI 10.1002/term.2744

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    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Sodium-metasilicate-derived medium; 0.6 mM H2O2 challenge. · source_derived_draft · unverified_draft

    ## silica-endothelial-survival Dissolved preparation altered the response to oxidative stress. A 0.5 mM silicon preparation improved HUVEC viability during hydrogen-peroxide exposure. Model: Sodium-metasilicate-derived medium; 0.6 mM H2O2 challenge. Limitations: Authors label exposure Si4+; this is not a measured pool of free aqueous Si4+. Supraphysiological culture exposure. Evidence access: Primary full text Ionic silicon improves endothelial cells' survival under toxic oxidative stress by overexpressing angiogenic markers and antioxidant enzymes. · 2018 · https://pubmed.ncbi.nlm.nih.gov/30062712/ · DOI 10.1002/term.2744
    Complete structured claim and evidence
  26. Urinary recovery was approximately 43% for orthosilicic acid, 17% for choline-stabilized acid and 1% for colloidal silica in this comparison.

    Experimental context and source evidence
    evidence_access
    Primary abstract
    experimental_model
    Small crossover comparisons; colloidal silica n=3, other sources at least five.
    limitations
    Different preparations and dissolution; not proof that choline itself suppresses absorption or defines a cofactor.
    nutrient_topic
    Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
    plain_language
    The same elemental amount need not deliver the same soluble exposure.
    primary_references
    The comparative absorption of silicon from different foods and food supplements. · 2009 · https://pubmed.ncbi.nlm.nih.gov/19356271/ · DOI 10.1017/S0007114509311757

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    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Small crossover comparisons; colloidal silica n=3, other sources at least five. · source_derived_draft · unverified_draft

    ## silica-formulation-absorption The same elemental amount need not deliver the same soluble exposure. Urinary recovery was approximately 43% for orthosilicic acid, 17% for choline-stabilized acid and 1% for colloidal silica in this comparison. Model: Small crossover comparisons; colloidal silica n=3, other sources at least five. Limitations: Different preparations and dissolution; not proof that choline itself suppresses absorption or defines a cofactor. Evidence access: Primary abstract The comparative absorption of silicon from different foods and food supplements. · 2009 · https://pubmed.ncbi.nlm.nih.gov/19356271/ · DOI 10.1017/S0007114509311757
    Complete structured claim and evidence
  27. Lumbar spine BMD did not significantly change; a femoral-neck signal arose in a post-hoc subgroup.

    Experimental context and source evidence
    evidence_access
    Primary abstract
    experimental_model
    Same 12-month calcium/D3-background trial.
    limitations
    Post-hoc subgroup findings are exploratory; not independent replication.
    nutrient_topic
    Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
    plain_language
    A matrix marker and bone-density outcome did not provide equivalent evidence.
    primary_references
    Choline-stabilized orthosilicic acid supplementation as an adjunct to calcium/vitamin D3 stimulates markers of bone formation in osteopenic females: a randomized, placebo-controlled trial. · 2008 · https://pubmed.ncbi.nlm.nih.gov/18547426/ · DOI 10.1186/1471-2474-9-85

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    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Same 12-month calcium/D3-background trial. · source_derived_draft · unverified_draft

    ## silica-human-bmd-null A matrix marker and bone-density outcome did not provide equivalent evidence. Lumbar spine BMD did not significantly change; a femoral-neck signal arose in a post-hoc subgroup. Model: Same 12-month calcium/D3-background trial. Limitations: Post-hoc subgroup findings are exploratory; not independent replication. Evidence access: Primary abstract Choline-stabilized orthosilicic acid supplementation as an adjunct to calcium/vitamin D3 stimulates markers of bone formation in osteopenic females: a randomized, placebo-controlled trial. · 2008 · https://pubmed.ncbi.nlm.nih.gov/18547426/ · DOI 10.1186/1471-2474-9-85
    Complete structured claim and evidence
  28. Human MARCO expression in CHO cells supported silica binding and apoptosis.

    Experimental context and source evidence
    evidence_access
    Primary abstract
    experimental_model
    Human construct in Chinese hamster ovary cells.
    limitations
    Not direct observation of human lung exposure or a universal uptake route.
    nutrient_topic
    Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
    plain_language
    A human receptor was tested in a nonhuman host cell.
    primary_references
    MARCO mediates silica uptake and toxicity in alveolar macrophages from C57BL/6 mice. · 2006 · https://pubmed.ncbi.nlm.nih.gov/16984918/ · DOI 10.1074/jbc.M605229200

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    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Human construct in Chinese hamster ovary cells. · source_derived_draft · unverified_draft

    ## silica-human-marco-binding A human receptor was tested in a nonhuman host cell. Human MARCO expression in CHO cells supported silica binding and apoptosis. Model: Human construct in Chinese hamster ovary cells. Limitations: Not direct observation of human lung exposure or a universal uptake route. Evidence access: Primary abstract MARCO mediates silica uptake and toxicity in alveolar macrophages from C57BL/6 mice. · 2006 · https://pubmed.ncbi.nlm.nih.gov/16984918/ · DOI 10.1074/jbc.M605229200
    Complete structured claim and evidence
  29. PINP differed from placebo at 12 months in the 6- and 12-mg Si groups without a clear dose response.

    Experimental context and source evidence
    evidence_access
    Primary abstract
    experimental_model
    184 women randomized; 136 completed; all received 1,000 mg calcium and 20 micrograms D3 daily.
    limitations
    Marker result is not fracture prevention; attrition and multiple endpoints matter.
    nutrient_topic
    Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
    plain_language
    A collagen-formation marker changed on top of calcium and vitamin D.
    primary_references
    Choline-stabilized orthosilicic acid supplementation as an adjunct to calcium/vitamin D3 stimulates markers of bone formation in osteopenic females: a randomized, placebo-controlled trial. · 2008 · https://pubmed.ncbi.nlm.nih.gov/18547426/ · DOI 10.1186/1471-2474-9-85

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    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · 184 women randomized; 136 completed; all received 1,000 mg calcium and 20 micrograms D3 daily. · source_derived_draft · unverified_draft

    ## silica-human-pinp A collagen-formation marker changed on top of calcium and vitamin D. PINP differed from placebo at 12 months in the 6- and 12-mg Si groups without a clear dose response. Model: 184 women randomized; 136 completed; all received 1,000 mg calcium and 20 micrograms D3 daily. Limitations: Marker result is not fracture prevention; attrition and multiple endpoints matter. Evidence access: Primary abstract Choline-stabilized orthosilicic acid supplementation as an adjunct to calcium/vitamin D3 stimulates markers of bone formation in osteopenic females: a randomized, placebo-controlled trial. · 2008 · https://pubmed.ncbi.nlm.nih.gov/18547426/ · DOI 10.1186/1471-2474-9-85
    Complete structured claim and evidence
  30. Prolyl hydroxylase inhibitors abolished the orthosilicic-acid-associated collagen increase.

    Experimental context and source evidence
    availability_state
    machinery_impairment Imported condition classification; unverified.
    evidence_access
    Primary abstract
    experimental_model
    Human osteoblast-like cell inhibitor study.
    limitations
    Does not prove direct silicon binding or silicon as an obligatory enzyme cofactor.
    nutrient_topic
    Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
    plain_language
    Intact collagen-processing machinery was needed for the response.
    primary_references
    Orthosilicic acid stimulates collagen type 1 synthesis and osteoblastic differentiation in human osteoblast-like cells in vitro. · 2003 · https://pubmed.ncbi.nlm.nih.gov/12633784/ · DOI 10.1016/s8756-3282(02)00950-x
    trigger_kind
    machinery_impairment Imported condition classification; unverified.

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    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Human osteoblast-like cell inhibitor study. · source_derived_draft · unverified_draft

    ## silica-hydroxylase-block Intact collagen-processing machinery was needed for the response. Prolyl hydroxylase inhibitors abolished the orthosilicic-acid-associated collagen increase. Model: Human osteoblast-like cell inhibitor study. Limitations: Does not prove direct silicon binding or silicon as an obligatory enzyme cofactor. Evidence access: Primary abstract Orthosilicic acid stimulates collagen type 1 synthesis and osteoblastic differentiation in human osteoblast-like cells in vitro. · 2003 · https://pubmed.ncbi.nlm.nih.gov/12633784/ · DOI 10.1016/s8756-3282(02)00950-x
    Complete structured claim and evidence
  31. Leupeptin reduced the measured cathepsin-B signal without preventing the nanoparticle-associated pyroptosis response.

    Experimental context and source evidence
    evidence_access
    Primary full text
    experimental_model
    Mouse RAW-ASC cells; 1 microgram/mL leupeptin.
    limitations
    Leupeptin is not cathepsin-B-specific; measured abundance is not a selective genetic activity test.
    nutrient_topic
    Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
    plain_language
    A protease-inhibitor result also failed to establish cathepsin B necessity.
    primary_references
    Characterization of Cathepsin B in Mediating Silica Nanoparticle-Induced Macrophage Pyroptosis via an NLRP3-Dependent Manner. · 2022 · https://pubmed.ncbi.nlm.nih.gov/35966002/ · DOI 10.2147/JIR.S371536

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    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Mouse RAW-ASC cells; 1 microgram/mL leupeptin. · source_derived_draft · unverified_draft

    ## silica-leupeptin-null A protease-inhibitor result also failed to establish cathepsin B necessity. Leupeptin reduced the measured cathepsin-B signal without preventing the nanoparticle-associated pyroptosis response. Model: Mouse RAW-ASC cells; 1 microgram/mL leupeptin. Limitations: Leupeptin is not cathepsin-B-specific; measured abundance is not a selective genetic activity test. Evidence access: Primary full text Characterization of Cathepsin B in Mediating Silica Nanoparticle-Induced Macrophage Pyroptosis via an NLRP3-Dependent Manner. · 2022 · https://pubmed.ncbi.nlm.nih.gov/35966002/ · DOI 10.2147/JIR.S371536
    Complete structured claim and evidence
  32. LY294002 reduced pathway signals and osteogenic markers during orthosilicic acid treatment.

    Experimental context and source evidence
    availability_state
    machinery_impairment Imported condition classification; unverified.
    evidence_access
    Primary abstract
    experimental_model
    Human osteoblast-like cultures.
    limitations
    LY294002 has off-target effects and is not an inhibitor specific to the entire PI3K–Akt–mTOR chain.
    nutrient_topic
    Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
    plain_language
    The cell response was sensitive to PI3K-pathway blockade.
    primary_references
    Orthosilicic Acid Accelerates Bone Formation in Human Osteoblast-Like Cells Through the PI3K-Akt-mTOR Pathway. · 2019 · https://pubmed.ncbi.nlm.nih.gov/30421162/ · DOI 10.1007/s12011-018-1574-9
    trigger_kind
    machinery_impairment Imported condition classification; unverified.

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    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Human osteoblast-like cultures. · source_derived_draft · unverified_draft

    ## silica-ly294002-block The cell response was sensitive to PI3K-pathway blockade. LY294002 reduced pathway signals and osteogenic markers during orthosilicic acid treatment. Model: Human osteoblast-like cultures. Limitations: LY294002 has off-target effects and is not an inhibitor specific to the entire PI3K–Akt–mTOR chain. Evidence access: Primary abstract Orthosilicic Acid Accelerates Bone Formation in Human Osteoblast-Like Cells Through the PI3K-Akt-mTOR Pathway. · 2019 · https://pubmed.ncbi.nlm.nih.gov/30421162/ · DOI 10.1007/s12011-018-1574-9
    Complete structured claim and evidence
  33. Phagocytosed silica caused lysosomal swelling and leakage in mouse macrophages.

    Experimental context and source evidence
    evidence_access
    Primary full text
    experimental_model
    Mouse macrophage imaging of vesicular cargo redistribution.
    limitations
    Particle preparation and cellular priming matter. Correction record: A 2026 author correction replaces an erroneously duplicated lower-left Fig. 8c micrograph with the retrieved original. This is a figure correction, not a scientific contradiction or retraction. https://www.nature.com/articles/s41590-026-02468-9
    nutrient_topic
    Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
    plain_language
    Particles can damage the compartment that engulfs them.
    primary_references
    Silica crystals and aluminum salts activate the NALP3 inflammasome through phagosomal destabilization. · 2008 · https://pubmed.ncbi.nlm.nih.gov/18604214/ · DOI 10.1038/ni.1631

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    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Mouse macrophage imaging of vesicular cargo redistribution. · source_derived_draft · unverified_draft

    ## silica-lysosome-damage Particles can damage the compartment that engulfs them. Phagocytosed silica caused lysosomal swelling and leakage in mouse macrophages. Model: Mouse macrophage imaging of vesicular cargo redistribution. Limitations: Particle preparation and cellular priming matter. Correction record: A 2026 author correction replaces an erroneously duplicated lower-left Fig. 8c micrograph with the retrieved original. This is a figure correction, not a scientific contradiction or retraction. https://www.nature.com/articles/s41590-026-02468-9 Evidence access: Primary full text Silica crystals and aluminum salts activate the NALP3 inflammasome through phagosomal destabilization. · 2008 · https://pubmed.ncbi.nlm.nih.gov/18604214/ · DOI 10.1038/ni.1631
    Complete structured claim and evidence
  34. MARCO-null alveolar macrophages showed greater lysosomal leakage and IL-1 beta/caspase-1 responses despite lower silica uptake.

    Experimental context and source evidence
    availability_state
    machinery_impairment Imported condition classification; unverified.
    evidence_access
    Primary full text
    experimental_model
    Primary mouse macrophages; silica 100 micrograms/mL.
    limitations
    Receptor uptake and lysosomal resilience are separate functions; not a contradiction of uptake measurements.
    nutrient_topic
    Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
    plain_language
    Less uptake did not necessarily mean less inflammation.
    primary_references
    Role of lysosomes in silica-induced inflammasome activation and inflammation in absence of MARCO. · 2014 · https://pubmed.ncbi.nlm.nih.gov/25054161/ · DOI 10.1155/2014/304180
    trigger_kind
    machinery_impairment Imported condition classification; unverified.

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    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Primary mouse macrophages; silica 100 micrograms/mL. · source_derived_draft · unverified_draft

    ## silica-marco-lysosome-loss Less uptake did not necessarily mean less inflammation. MARCO-null alveolar macrophages showed greater lysosomal leakage and IL-1 beta/caspase-1 responses despite lower silica uptake. Model: Primary mouse macrophages; silica 100 micrograms/mL. Limitations: Receptor uptake and lysosomal resilience are separate functions; not a contradiction of uptake measurements. Evidence access: Primary full text Role of lysosomes in silica-induced inflammasome activation and inflammation in absence of MARCO. · 2014 · https://pubmed.ncbi.nlm.nih.gov/25054161/ · DOI 10.1155/2014/304180
    Complete structured claim and evidence
  35. MARCO loss or antibody blockade prevented silica uptake and cytotoxicity in C57BL/6 alveolar macrophages.

    Experimental context and source evidence
    availability_state
    machinery_impairment Imported condition classification; unverified.
    evidence_access
    Primary abstract
    experimental_model
    Primary mouse macrophages; receptor-null and antibody experiments.
    limitations
    Mouse strain matters: BALB/c uptake was not blocked by the same receptor antibodies.
    nutrient_topic
    Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
    plain_language
    A scavenger receptor can gate particle entry.
    primary_references
    MARCO mediates silica uptake and toxicity in alveolar macrophages from C57BL/6 mice. · 2006 · https://pubmed.ncbi.nlm.nih.gov/16984918/ · DOI 10.1074/jbc.M605229200
    trigger_kind
    machinery_impairment Imported condition classification; unverified.

    Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 408–414

    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Primary mouse macrophages; receptor-null and antibody experiments. · source_derived_draft · unverified_draft

    ## silica-marco-uptake A scavenger receptor can gate particle entry. MARCO loss or antibody blockade prevented silica uptake and cytotoxicity in C57BL/6 alveolar macrophages. Model: Primary mouse macrophages; receptor-null and antibody experiments. Limitations: Mouse strain matters: BALB/c uptake was not blocked by the same receptor antibodies. Evidence access: Primary abstract MARCO mediates silica uptake and toxicity in alveolar macrophages from C57BL/6 mice. · 2006 · https://pubmed.ncbi.nlm.nih.gov/16984918/ · DOI 10.1074/jbc.M605229200
    Complete structured claim and evidence
  36. Silicon-releasing microcarriers increased HIF1A expression and stabilization, attributed to reduced PHD2 activity in HUVECs.

    Mesoporous silica microcarriers → HIF-1 alpha source_derived_draftungraded
    Experimental context and source evidence
    evidence_access
    Primary abstract
    experimental_model
    Human endothelial cells; released silicon in the ppm range.
    limitations
    Accessed abstract does not establish direct inhibitor binding; HIF PHD2 differs from collagen prolyl hydroxylase.
    nutrient_topic
    Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
    plain_language
    A biomaterial study implicated oxygen-sensing machinery.
    primary_references
    Promoting angiogenesis with mesoporous microcarriers through a synergistic action of delivered silicon ion and VEGF. · 2017 · https://pubmed.ncbi.nlm.nih.gov/27918936/ · DOI 10.1016/j.biomaterials.2016.11.053

    Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 272–278

    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Human endothelial cells; released silicon in the ppm range. · source_derived_draft · unverified_draft

    ## silica-microcarrier-hif A biomaterial study implicated oxygen-sensing machinery. Silicon-releasing microcarriers increased HIF1A expression and stabilization, attributed to reduced PHD2 activity in HUVECs. Model: Human endothelial cells; released silicon in the ppm range. Limitations: Accessed abstract does not establish direct inhibitor binding; HIF PHD2 differs from collagen prolyl hydroxylase. Evidence access: Primary abstract Promoting angiogenesis with mesoporous microcarriers through a synergistic action of delivered silicon ion and VEGF. · 2017 · https://pubmed.ncbi.nlm.nih.gov/27918936/ · DOI 10.1016/j.biomaterials.2016.11.053
    Complete structured claim and evidence
  37. Microcarriers releasing silicon and loaded VEGF increased endothelial migration and tubular networking.

    Experimental context and source evidence
    evidence_access
    Primary abstract
    experimental_model
    Human HUVECs; engineered local-release formulation.
    limitations
    Not evidence of oral silica/VEGF supplementation or a universal synergy.
    nutrient_topic
    Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
    plain_language
    A tested growth-factor combination promoted vascular-cell behavior.
    primary_references
    Promoting angiogenesis with mesoporous microcarriers through a synergistic action of delivered silicon ion and VEGF. · 2017 · https://pubmed.ncbi.nlm.nih.gov/27918936/ · DOI 10.1016/j.biomaterials.2016.11.053

    Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 280–286

    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Human HUVECs; engineered local-release formulation. · source_derived_draft · unverified_draft

    ## silica-microcarrier-vegf A tested growth-factor combination promoted vascular-cell behavior. Microcarriers releasing silicon and loaded VEGF increased endothelial migration and tubular networking. Model: Human HUVECs; engineered local-release formulation. Limitations: Not evidence of oral silica/VEGF supplementation or a universal synergy. Evidence access: Primary abstract Promoting angiogenesis with mesoporous microcarriers through a synergistic action of delivered silicon ion and VEGF. · 2017 · https://pubmed.ncbi.nlm.nih.gov/27918936/ · DOI 10.1016/j.biomaterials.2016.11.053
    Complete structured claim and evidence
  38. Orthosilicic acid increased miR-146a during later osteogenic differentiation of human mesenchymal stromal cells.

    Orthosilicic acid / Si(OH)4 → Human miR-146a source_derived_draftungraded
    Experimental context and source evidence
    evidence_access
    Primary abstract
    experimental_model
    Human MSC microarray and qPCR experiments.
    limitations
    Late-stage association is distinct from identification of the upstream silicon sensor.
    nutrient_topic
    Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
    plain_language
    A regulatory RNA connects exposure to cell-state change.
    primary_references
    Orthosilicic acid, Si(OH)4, stimulates osteoblast differentiation in vitro by upregulating miR-146a to antagonize NF-κB activation. · 2016 · https://pubmed.ncbi.nlm.nih.gov/27163405/ · DOI 10.1016/j.actbio.2016.05.007

    Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 184–190

    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Human MSC microarray and qPCR experiments. · source_derived_draft · unverified_draft

    ## silica-mir146a A regulatory RNA connects exposure to cell-state change. Orthosilicic acid increased miR-146a during later osteogenic differentiation of human mesenchymal stromal cells. Model: Human MSC microarray and qPCR experiments. Limitations: Late-stage association is distinct from identification of the upstream silicon sensor. Evidence access: Primary abstract Orthosilicic acid, Si(OH)4, stimulates osteoblast differentiation in vitro by upregulating miR-146a to antagonize NF-κB activation. · 2016 · https://pubmed.ncbi.nlm.nih.gov/27163405/ · DOI 10.1016/j.actbio.2016.05.007
    Complete structured claim and evidence
  39. The monomeric preparation did not significantly reduce aluminum availability in the same study.

    Orthosilicic acid / Si(OH)4 → Aluminum(III) source_derived_draftungraded
    Experimental context and source evidence
    evidence_access
    Primary abstract
    experimental_model
    Same three-person human tracer experiment.
    limitations
    Chemical-form difference is not a scientific contradiction.
    nutrient_topic
    Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
    plain_language
    Soluble monomers and oligomers do not behave identically.
    primary_references
    Oligomeric but not monomeric silica prevents aluminum absorption in humans. · 2000 · https://pubmed.ncbi.nlm.nih.gov/10731501/ · DOI 10.1093/ajcn/71.4.944

    Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 96–102

    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Same three-person human tracer experiment. · source_derived_draft · unverified_draft

    ## silica-monomer-aluminum-null Soluble monomers and oligomers do not behave identically. The monomeric preparation did not significantly reduce aluminum availability in the same study. Model: Same three-person human tracer experiment. Limitations: Chemical-form difference is not a scientific contradiction. Evidence access: Primary abstract Oligomeric but not monomeric silica prevents aluminum absorption in humans. · 2000 · https://pubmed.ncbi.nlm.nih.gov/10731501/ · DOI 10.1093/ajcn/71.4.944
    Complete structured claim and evidence
  40. Anti-miR-146a suppressed differentiation in MC3T3 preosteoblasts in the silicate study.

    Experimental context and source evidence
    availability_state
    machinery_impairment Imported condition classification; unverified.
    evidence_access
    Primary abstract
    experimental_model
    Mouse MC3T3 cells; distinguish from the human MSC discovery assay.
    limitations
    Abstract does not resolve all species-specific downstream targets.
    nutrient_topic
    Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
    plain_language
    Removing a regulatory RNA weakened bone-cell maturation.
    primary_references
    Orthosilicic acid, Si(OH)4, stimulates osteoblast differentiation in vitro by upregulating miR-146a to antagonize NF-κB activation. · 2016 · https://pubmed.ncbi.nlm.nih.gov/27163405/ · DOI 10.1016/j.actbio.2016.05.007
    trigger_kind
    machinery_impairment Imported condition classification; unverified.

    Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 192–198

    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Mouse MC3T3 cells; distinguish from the human MSC discovery assay. · source_derived_draft · unverified_draft

    ## silica-mouse-antimir Removing a regulatory RNA weakened bone-cell maturation. Anti-miR-146a suppressed differentiation in MC3T3 preosteoblasts in the silicate study. Model: Mouse MC3T3 cells; distinguish from the human MSC discovery assay. Limitations: Abstract does not resolve all species-specific downstream targets. Evidence access: Primary abstract Orthosilicic acid, Si(OH)4, stimulates osteoblast differentiation in vitro by upregulating miR-146a to antagonize NF-κB activation. · 2016 · https://pubmed.ncbi.nlm.nih.gov/27163405/ · DOI 10.1016/j.actbio.2016.05.007
    Complete structured claim and evidence
  41. A 0.1 mM silicon preparation increased C2C12 viability, migration and myotube formation.

    Experimental context and source evidence
    evidence_access
    Primary full text
    experimental_model
    Mouse C2C12 cultures; sodium-metasilicate-derived medium.
    limitations
    Not proof of human muscle regeneration after supplementation.
    nutrient_topic
    Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
    plain_language
    The soluble-preparation findings extend beyond bone cells.
    primary_references
    Ionic Silicon Protects Oxidative Damage and Promotes Skeletal Muscle Cell Regeneration. · 2021 · https://pubmed.ncbi.nlm.nih.gov/33419056/ · DOI 10.3390/ijms22020497

    Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 320–326

    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Mouse C2C12 cultures; sodium-metasilicate-derived medium. · source_derived_draft · unverified_draft

    ## silica-muscle-myotubes The soluble-preparation findings extend beyond bone cells. A 0.1 mM silicon preparation increased C2C12 viability, migration and myotube formation. Model: Mouse C2C12 cultures; sodium-metasilicate-derived medium. Limitations: Not proof of human muscle regeneration after supplementation. Evidence access: Primary full text Ionic Silicon Protects Oxidative Damage and Promotes Skeletal Muscle Cell Regeneration. · 2021 · https://pubmed.ncbi.nlm.nih.gov/33419056/ · DOI 10.3390/ijms22020497
    Complete structured claim and evidence
  42. Silicon preparations at 0.1–2 mM attenuated peroxide-associated loss of viability and differentiation.

    Experimental context and source evidence
    evidence_access
    Primary full text
    experimental_model
    Mouse muscle-cell culture, 24-hour challenge experiments.
    limitations
    Does not identify a direct antioxidant reaction or an in-vivo effective dose.
    nutrient_topic
    Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
    plain_language
    Oxidative challenge changed the context in which protection was observed.
    primary_references
    Ionic Silicon Protects Oxidative Damage and Promotes Skeletal Muscle Cell Regeneration. · 2021 · https://pubmed.ncbi.nlm.nih.gov/33419056/ · DOI 10.3390/ijms22020497

    Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 328–334

    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Mouse muscle-cell culture, 24-hour challenge experiments. · source_derived_draft · unverified_draft

    ## silica-muscle-peroxide Oxidative challenge changed the context in which protection was observed. Silicon preparations at 0.1–2 mM attenuated peroxide-associated loss of viability and differentiation. Model: Mouse muscle-cell culture, 24-hour challenge experiments. Limitations: Does not identify a direct antioxidant reaction or an in-vivo effective dose. Evidence access: Primary full text Ionic Silicon Protects Oxidative Damage and Promotes Skeletal Muscle Cell Regeneration. · 2021 · https://pubmed.ncbi.nlm.nih.gov/33419056/ · DOI 10.3390/ijms22020497
    Complete structured claim and evidence
  43. Silica nanoparticles increased inflammasome/pyroptosis-associated markers; MCC950 suppressed the response.

    Experimental context and source evidence
    evidence_access
    Primary full text
    experimental_model
    Mouse RAW-ASC cells; LPS priming, 100 micrograms/mL silica, approximately 30 nm particles.
    limitations
    Do not assume all sizes, coatings or amorphous preparations behave identically.
    nutrient_topic
    Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
    plain_language
    A nanoparticle preparation was examined separately from quartz.
    primary_references
    Characterization of Cathepsin B in Mediating Silica Nanoparticle-Induced Macrophage Pyroptosis via an NLRP3-Dependent Manner. · 2022 · https://pubmed.ncbi.nlm.nih.gov/35966002/ · DOI 10.2147/JIR.S371536

    Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 504–510

    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Mouse RAW-ASC cells; LPS priming, 100 micrograms/mL silica, approximately 30 nm particles. · source_derived_draft · unverified_draft

    ## silica-nanoparticle-nlrp3 A nanoparticle preparation was examined separately from quartz. Silica nanoparticles increased inflammasome/pyroptosis-associated markers; MCC950 suppressed the response. Model: Mouse RAW-ASC cells; LPS priming, 100 micrograms/mL silica, approximately 30 nm particles. Limitations: Do not assume all sizes, coatings or amorphous preparations behave identically. Evidence access: Primary full text Characterization of Cathepsin B in Mediating Silica Nanoparticle-Induced Macrophage Pyroptosis via an NLRP3-Dependent Manner. · 2022 · https://pubmed.ncbi.nlm.nih.gov/35966002/ · DOI 10.2147/JIR.S371536
    Complete structured claim and evidence
  44. Orthosilicic acid attenuated TNF-induced NF-kappaB activation in the osteoblast experimental program.

    Experimental context and source evidence
    evidence_access
    Primary abstract
    experimental_model
    Human MSC/mouse preosteoblast study; exact species for each downstream assay unresolved in accessed abstract.
    limitations
    Do not assign all downstream experiments to human cells or infer an oral anti-inflammatory treatment.
    nutrient_topic
    Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
    plain_language
    A regulatory-RNA response was linked to lower inflammatory signaling.
    primary_references
    Orthosilicic acid, Si(OH)4, stimulates osteoblast differentiation in vitro by upregulating miR-146a to antagonize NF-κB activation. · 2016 · https://pubmed.ncbi.nlm.nih.gov/27163405/ · DOI 10.1016/j.actbio.2016.05.007

    Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 520–526

    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Human MSC/mouse preosteoblast study; exact species for each downstream assay unresolved in accessed abstract. · source_derived_draft · unverified_draft

    ## silica-nfkb-regulation A regulatory-RNA response was linked to lower inflammatory signaling. Orthosilicic acid attenuated TNF-induced NF-kappaB activation in the osteoblast experimental program. Model: Human MSC/mouse preosteoblast study; exact species for each downstream assay unresolved in accessed abstract. Limitations: Do not assign all downstream experiments to human cells or infer an oral anti-inflammatory treatment. Evidence access: Primary abstract Orthosilicic acid, Si(OH)4, stimulates osteoblast differentiation in vitro by upregulating miR-146a to antagonize NF-κB activation. · 2016 · https://pubmed.ncbi.nlm.nih.gov/27163405/ · DOI 10.1016/j.actbio.2016.05.007
    Complete structured claim and evidence
  45. Nlrp3-deficient macrophages failed to mount the normal silica-induced caspase-1/IL-1 beta response.

    Experimental context and source evidence
    availability_state
    machinery_impairment Imported condition classification; unverified.
    evidence_access
    Primary full text
    experimental_model
    LPS-primed mouse macrophage genetic comparison.
    limitations
    Priming and activation are separate; dietary silicon is not the particle stimulus. Correction record: A 2026 author correction replaces an erroneously duplicated lower-left Fig. 8c micrograph with the retrieved original. This is a figure correction, not a scientific contradiction or retraction. https://www.nature.com/articles/s41590-026-02468-9
    nutrient_topic
    Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
    plain_language
    The sensor is a distinct necessary component in this model.
    primary_references
    Silica crystals and aluminum salts activate the NALP3 inflammasome through phagosomal destabilization. · 2008 · https://pubmed.ncbi.nlm.nih.gov/18604214/ · DOI 10.1038/ni.1631
    trigger_kind
    machinery_impairment Imported condition classification; unverified.

    Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 440–446

    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · LPS-primed mouse macrophage genetic comparison. · source_derived_draft · unverified_draft

    ## silica-nlrp3-loss The sensor is a distinct necessary component in this model. Nlrp3-deficient macrophages failed to mount the normal silica-induced caspase-1/IL-1 beta response. Model: LPS-primed mouse macrophage genetic comparison. Limitations: Priming and activation are separate; dietary silicon is not the particle stimulus. Correction record: A 2026 author correction replaces an erroneously duplicated lower-left Fig. 8c micrograph with the retrieved original. This is a figure correction, not a scientific contradiction or retraction. https://www.nature.com/articles/s41590-026-02468-9 Evidence access: Primary full text Silica crystals and aluminum salts activate the NALP3 inflammasome through phagosomal destabilization. · 2008 · https://pubmed.ncbi.nlm.nih.gov/18604214/ · DOI 10.1038/ni.1631
    Complete structured claim and evidence
  46. Noggin pretreatment suppressed silicon-associated SMAD1/5 phosphorylation, RUNX2 and collagen expression.

    Experimental context and source evidence
    availability_state
    machinery_impairment Imported condition classification; unverified.
    evidence_access
    Primary abstract
    experimental_model
    Human osteoblast-like cell pharmacological experiment.
    limitations
    Noggin is a BMP antagonist, not a uniquely selective proof of BMP2 mediation.
    nutrient_topic
    Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
    plain_language
    Blocking BMP signaling weakened the response.
    primary_references
    Biological Silicon Stimulates Collagen Type 1 and Osteocalcin Synthesis in Human Osteoblast-Like Cells Through the BMP-2/Smad/RUNX2 Signaling Pathway. · 2016 · https://pubmed.ncbi.nlm.nih.gov/27025722/ · DOI 10.1007/s12011-016-0686-3
    trigger_kind
    machinery_impairment Imported condition classification; unverified.

    Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 160–166

    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Human osteoblast-like cell pharmacological experiment. · source_derived_draft · unverified_draft

    ## silica-noggin-block Blocking BMP signaling weakened the response. Noggin pretreatment suppressed silicon-associated SMAD1/5 phosphorylation, RUNX2 and collagen expression. Model: Human osteoblast-like cell pharmacological experiment. Limitations: Noggin is a BMP antagonist, not a uniquely selective proof of BMP2 mediation. Evidence access: Primary abstract Biological Silicon Stimulates Collagen Type 1 and Osteocalcin Synthesis in Human Osteoblast-Like Cells Through the BMP-2/Smad/RUNX2 Signaling Pathway. · 2016 · https://pubmed.ncbi.nlm.nih.gov/27025722/ · DOI 10.1007/s12011-016-0686-3
    Complete structured claim and evidence
  47. Cybb/gp91phox-deficient macrophages retained silica-triggered inflammasome responses.

    Experimental context and source evidence
    evidence_access
    Primary full text
    experimental_model
    Mouse macrophage genetic comparison.
    limitations
    Does not exclude every ROS source or establish NADPH depletion. Correction record: A 2026 author correction replaces an erroneously duplicated lower-left Fig. 8c micrograph with the retrieved original. This is a figure correction, not a scientific contradiction or retraction. https://www.nature.com/articles/s41590-026-02468-9
    nutrient_topic
    Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
    plain_language
    The phagocyte NADPH oxidase burst was not obligatory in this model.
    primary_references
    Silica crystals and aluminum salts activate the NALP3 inflammasome through phagosomal destabilization. · 2008 · https://pubmed.ncbi.nlm.nih.gov/18604214/ · DOI 10.1038/ni.1631

    Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 456–462

    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Mouse macrophage genetic comparison. · source_derived_draft · unverified_draft

    ## silica-nox2-null The phagocyte NADPH oxidase burst was not obligatory in this model. Cybb/gp91phox-deficient macrophages retained silica-triggered inflammasome responses. Model: Mouse macrophage genetic comparison. Limitations: Does not exclude every ROS source or establish NADPH depletion. Correction record: A 2026 author correction replaces an erroneously duplicated lower-left Fig. 8c micrograph with the retrieved original. This is a figure correction, not a scientific contradiction or retraction. https://www.nature.com/articles/s41590-026-02468-9 Evidence access: Primary full text Silica crystals and aluminum salts activate the NALP3 inflammasome through phagosomal destabilization. · 2008 · https://pubmed.ncbi.nlm.nih.gov/18604214/ · DOI 10.1038/ni.1631
    Complete structured claim and evidence
  48. Oligomeric silica reduced aluminum tracer availability by 67% in the three-person comparison.

    Oligomeric silicic acid → Aluminum(III) source_derived_draftungraded
    Experimental context and source evidence
    evidence_access
    Primary abstract
    experimental_model
    Human aluminum-26 tracer study; 17 mg silica preparation as reported.
    limitations
    Very small study; does not establish treatment of aluminum toxicity.
    nutrient_topic
    Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
    plain_language
    A less readily absorbed polymer can bind aluminum in the gut.
    primary_references
    Oligomeric but not monomeric silica prevents aluminum absorption in humans. · 2000 · https://pubmed.ncbi.nlm.nih.gov/10731501/ · DOI 10.1093/ajcn/71.4.944

    Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 88–94

    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Human aluminum-26 tracer study; 17 mg silica preparation as reported. · source_derived_draft · unverified_draft

    ## silica-oligomer-aluminum A less readily absorbed polymer can bind aluminum in the gut. Oligomeric silica reduced aluminum tracer availability by 67% in the three-person comparison. Model: Human aluminum-26 tracer study; 17 mg silica preparation as reported. Limitations: Very small study; does not establish treatment of aluminum toxicity. Evidence access: Primary abstract Oligomeric but not monomeric silica prevents aluminum absorption in humans. · 2000 · https://pubmed.ncbi.nlm.nih.gov/10731501/ · DOI 10.1093/ajcn/71.4.944
    Complete structured claim and evidence
  49. Median minimum uptake estimated from urine was 50.3% in eight volunteers receiving orthosilicic acid.

    Experimental context and source evidence
    evidence_access
    Primary abstract
    experimental_model
    Water containing 27–55 mg Si/L; small human kinetic study.
    limitations
    Urinary recovery is a lower-bound estimate, not direct intracellular measurement.
    nutrient_topic
    Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
    plain_language
    A substantial fraction of soluble silicon entered the body.
    primary_references
    Silicic acid: its gastrointestinal uptake and urinary excretion in man and effects on aluminium excretion. · 1999 · https://pubmed.ncbi.nlm.nih.gov/10612067/ · DOI 10.1016/s0162-0134(99)00126-9

    Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 64–70

    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Water containing 27–55 mg Si/L; small human kinetic study. · source_derived_draft · unverified_draft

    ## silica-oral-uptake A substantial fraction of soluble silicon entered the body. Median minimum uptake estimated from urine was 50.3% in eight volunteers receiving orthosilicic acid. Model: Water containing 27–55 mg Si/L; small human kinetic study. Limitations: Urinary recovery is a lower-bound estimate, not direct intracellular measurement. Evidence access: Primary abstract Silicic acid: its gastrointestinal uptake and urinary excretion in man and effects on aluminium excretion. · 1999 · https://pubmed.ncbi.nlm.nih.gov/10612067/ · DOI 10.1016/s0162-0134(99)00126-9
    Complete structured claim and evidence
  50. At 1,700 micromolar orthosilicic acid, Saos-2 colony survival was about 20% below control, with reduced proliferation/adhesion.

    Experimental context and source evidence
    evidence_access
    Primary abstract
    experimental_model
    Human osteoblast-like culture comparison, up to solubility limit.
    limitations
    Different concentration and endpoints from low-dose collagen studies; not a fabricated contradiction.
    nutrient_topic
    Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
    plain_language
    Higher exposure was not uniformly beneficial.
    primary_references
    Divergent effects of orthosilicic acid and dimethylsilanediol on cell survival and adhesion in human osteoblast-like cells. · 2008 · https://pubmed.ncbi.nlm.nih.gov/18755397/ · DOI 10.1016/j.jtemb.2008.02.001

    Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 200–206

    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Human osteoblast-like culture comparison, up to solubility limit. · source_derived_draft · unverified_draft

    ## silica-osa-high-exposure Higher exposure was not uniformly beneficial. At 1,700 micromolar orthosilicic acid, Saos-2 colony survival was about 20% below control, with reduced proliferation/adhesion. Model: Human osteoblast-like culture comparison, up to solubility limit. Limitations: Different concentration and endpoints from low-dose collagen studies; not a fabricated contradiction. Evidence access: Primary abstract Divergent effects of orthosilicic acid and dimethylsilanediol on cell survival and adhesion in human osteoblast-like cells. · 2008 · https://pubmed.ncbi.nlm.nih.gov/18755397/ · DOI 10.1016/j.jtemb.2008.02.001
    Complete structured claim and evidence
  51. The silicon preparation lowered Tartrate-resistant acid phosphatase mRNA at 48 and 72 hours.

    Experimental context and source evidence
    evidence_access
    Primary full text
    experimental_model
    Human RANKL-stimulated CD14+ cultures, 50 micrograms Si/mL.
    limitations
    Transcript abundance is not direct inhibition of the protein.
    nutrient_topic
    Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
    plain_language
    A specific osteoclast marker changed during differentiation.
    primary_references
    Orthosilicic acid inhibits human osteoclast differentiation and bone resorption. · 2024 · https://pubmed.ncbi.nlm.nih.gov/39405281/ · DOI 10.1371/journal.pone.0312169

    Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 232–238

    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Human RANKL-stimulated CD14+ cultures, 50 micrograms Si/mL. · source_derived_draft · unverified_draft

    ## silica-osteoclast-acp5 A specific osteoclast marker changed during differentiation. The silicon preparation lowered Tartrate-resistant acid phosphatase mRNA at 48 and 72 hours. Model: Human RANKL-stimulated CD14+ cultures, 50 micrograms Si/mL. Limitations: Transcript abundance is not direct inhibition of the protein. Evidence access: Primary full text Orthosilicic acid inhibits human osteoclast differentiation and bone resorption. · 2024 · https://pubmed.ncbi.nlm.nih.gov/39405281/ · DOI 10.1371/journal.pone.0312169
    Complete structured claim and evidence
  52. AQP9 mRNA increased significantly at 72 hours during silicon exposure.

    Experimental context and source evidence
    evidence_access
    Primary full text
    experimental_model
    Human CD14+ osteoclast cultures.
    limitations
    No AQP9 loss-of-function test demonstrated that it mediated the resorption effect.
    nutrient_topic
    Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
    plain_language
    Transporter expression changed even while differentiation markers fell.
    primary_references
    Orthosilicic acid inhibits human osteoclast differentiation and bone resorption. · 2024 · https://pubmed.ncbi.nlm.nih.gov/39405281/ · DOI 10.1371/journal.pone.0312169

    Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 256–262

    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Human CD14+ osteoclast cultures. · source_derived_draft · unverified_draft

    ## silica-osteoclast-aqp9 Transporter expression changed even while differentiation markers fell. AQP9 mRNA increased significantly at 72 hours during silicon exposure. Model: Human CD14+ osteoclast cultures. Limitations: No AQP9 loss-of-function test demonstrated that it mediated the resorption effect. Evidence access: Primary full text Orthosilicic acid inhibits human osteoclast differentiation and bone resorption. · 2024 · https://pubmed.ncbi.nlm.nih.gov/39405281/ · DOI 10.1371/journal.pone.0312169
    Complete structured claim and evidence
  53. The silicon preparation lowered Calcitonin receptor mRNA at 48 hours.

    Experimental context and source evidence
    evidence_access
    Primary full text
    experimental_model
    Human RANKL-stimulated CD14+ cultures, 50 micrograms Si/mL.
    limitations
    Transcript abundance is not direct inhibition of the protein.
    nutrient_topic
    Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
    plain_language
    A specific osteoclast marker changed during differentiation.
    primary_references
    Orthosilicic acid inhibits human osteoclast differentiation and bone resorption. · 2024 · https://pubmed.ncbi.nlm.nih.gov/39405281/ · DOI 10.1371/journal.pone.0312169

    Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 240–246

    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Human RANKL-stimulated CD14+ cultures, 50 micrograms Si/mL. · source_derived_draft · unverified_draft

    ## silica-osteoclast-calcr A specific osteoclast marker changed during differentiation. The silicon preparation lowered Calcitonin receptor mRNA at 48 hours. Model: Human RANKL-stimulated CD14+ cultures, 50 micrograms Si/mL. Limitations: Transcript abundance is not direct inhibition of the protein. Evidence access: Primary full text Orthosilicic acid inhibits human osteoclast differentiation and bone resorption. · 2024 · https://pubmed.ncbi.nlm.nih.gov/39405281/ · DOI 10.1371/journal.pone.0312169
    Complete structured claim and evidence
  54. The silicon preparation lowered Cathepsin K mRNA at 48 and 72 hours.

    Experimental context and source evidence
    evidence_access
    Primary full text
    experimental_model
    Human RANKL-stimulated CD14+ cultures, 50 micrograms Si/mL.
    limitations
    Transcript abundance is not direct inhibition of the protein.
    nutrient_topic
    Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
    plain_language
    A specific osteoclast marker changed during differentiation.
    primary_references
    Orthosilicic acid inhibits human osteoclast differentiation and bone resorption. · 2024 · https://pubmed.ncbi.nlm.nih.gov/39405281/ · DOI 10.1371/journal.pone.0312169

    Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 224–230

    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Human RANKL-stimulated CD14+ cultures, 50 micrograms Si/mL. · source_derived_draft · unverified_draft

    ## silica-osteoclast-ctsk A specific osteoclast marker changed during differentiation. The silicon preparation lowered Cathepsin K mRNA at 48 and 72 hours. Model: Human RANKL-stimulated CD14+ cultures, 50 micrograms Si/mL. Limitations: Transcript abundance is not direct inhibition of the protein. Evidence access: Primary full text Orthosilicic acid inhibits human osteoclast differentiation and bone resorption. · 2024 · https://pubmed.ncbi.nlm.nih.gov/39405281/ · DOI 10.1371/journal.pone.0312169
    Complete structured claim and evidence
  55. The silicon preparation lowered DC-STAMP mRNA at 48 and 96 hours.

    Experimental context and source evidence
    evidence_access
    Primary full text
    experimental_model
    Human RANKL-stimulated CD14+ cultures, 50 micrograms Si/mL.
    limitations
    Transcript abundance is not direct inhibition of the protein.
    nutrient_topic
    Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
    plain_language
    A specific osteoclast marker changed during differentiation.
    primary_references
    Orthosilicic acid inhibits human osteoclast differentiation and bone resorption. · 2024 · https://pubmed.ncbi.nlm.nih.gov/39405281/ · DOI 10.1371/journal.pone.0312169

    Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 248–254

    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Human RANKL-stimulated CD14+ cultures, 50 micrograms Si/mL. · source_derived_draft · unverified_draft

    ## silica-osteoclast-dcstamp A specific osteoclast marker changed during differentiation. The silicon preparation lowered DC-STAMP mRNA at 48 and 96 hours. Model: Human RANKL-stimulated CD14+ cultures, 50 micrograms Si/mL. Limitations: Transcript abundance is not direct inhibition of the protein. Evidence access: Primary full text Orthosilicic acid inhibits human osteoclast differentiation and bone resorption. · 2024 · https://pubmed.ncbi.nlm.nih.gov/39405281/ · DOI 10.1371/journal.pone.0312169
    Complete structured claim and evidence
  56. The 75%-OSA silicon preparation reduced RANKL-stimulated TRAP-positive multinucleated human osteoclasts.

    Experimental context and source evidence
    evidence_access
    Primary full text
    experimental_model
    Human CD14+ monocytes, M-CSF and recombinant mouse RANKL; 50 micrograms Si/mL.
    limitations
    About 1.8 mM total Si, not a normal plasma exposure or chemically pure OSA.
    nutrient_topic
    Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
    plain_language
    Fewer bone-resorbing cells formed under these culture conditions.
    primary_references
    Orthosilicic acid inhibits human osteoclast differentiation and bone resorption. · 2024 · https://pubmed.ncbi.nlm.nih.gov/39405281/ · DOI 10.1371/journal.pone.0312169

    Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 216–222

    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Human CD14+ monocytes, M-CSF and recombinant mouse RANKL; 50 micrograms Si/mL. · source_derived_draft · unverified_draft

    ## silica-osteoclast-differentiation Fewer bone-resorbing cells formed under these culture conditions. The 75%-OSA silicon preparation reduced RANKL-stimulated TRAP-positive multinucleated human osteoclasts. Model: Human CD14+ monocytes, M-CSF and recombinant mouse RANKL; 50 micrograms Si/mL. Limitations: About 1.8 mM total Si, not a normal plasma exposure or chemically pure OSA. Evidence access: Primary full text Orthosilicic acid inhibits human osteoclast differentiation and bone resorption. · 2024 · https://pubmed.ncbi.nlm.nih.gov/39405281/ · DOI 10.1371/journal.pone.0312169
    Complete structured claim and evidence
  57. Silicon treatment reduced resorption pits and released type I collagen fragments on bone slices.

    Experimental context and source evidence
    evidence_access
    Primary full text
    experimental_model
    Human osteoclast bone-disc assays; 50 micrograms Si/mL.
    limitations
    Not demonstrated clinical fracture prevention.
    nutrient_topic
    Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
    plain_language
    The study measured matrix breakdown as well as cell markers.
    primary_references
    Orthosilicic acid inhibits human osteoclast differentiation and bone resorption. · 2024 · https://pubmed.ncbi.nlm.nih.gov/39405281/ · DOI 10.1371/journal.pone.0312169

    Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 264–270

    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Human osteoclast bone-disc assays; 50 micrograms Si/mL. · source_derived_draft · unverified_draft

    ## silica-osteoclast-resorption The study measured matrix breakdown as well as cell markers. Silicon treatment reduced resorption pits and released type I collagen fragments on bone slices. Model: Human osteoclast bone-disc assays; 50 micrograms Si/mL. Limitations: Not demonstrated clinical fracture prevention. Evidence access: Primary full text Orthosilicic acid inhibits human osteoclast differentiation and bone resorption. · 2024 · https://pubmed.ncbi.nlm.nih.gov/39405281/ · DOI 10.1371/journal.pone.0312169
    Complete structured claim and evidence
  58. NFS-rich silica strongly adsorbed zwitterionic phospholipid assemblies and disrupted their order more than negatively charged liposomes.

    Experimental context and source evidence
    evidence_access
    Primary full text
    experimental_model
    Model membranes and computational recognition analysis.
    limitations
    Membrane interaction is not evidence that choline intake increases silica injury or protects against it.
    nutrient_topic
    Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
    plain_language
    The phosphocholine headgroup creates a molecular link to membrane composition.
    primary_references
    Molecular recognition between membrane epitopes and nearly free surface silanols explains silica membranolytic activity. · 2022 · https://pubmed.ncbi.nlm.nih.gov/35738078/ · DOI 10.1016/j.colsurfb.2022.112625

    Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 400–406

    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Model membranes and computational recognition analysis. · source_derived_draft · unverified_draft

    ## silica-phosphocholine-recognition The phosphocholine headgroup creates a molecular link to membrane composition. NFS-rich silica strongly adsorbed zwitterionic phospholipid assemblies and disrupted their order more than negatively charged liposomes. Model: Model membranes and computational recognition analysis. Limitations: Membrane interaction is not evidence that choline intake increases silica injury or protects against it. Evidence access: Primary full text Molecular recognition between membrane epitopes and nearly free surface silanols explains silica membranolytic activity. · 2022 · https://pubmed.ncbi.nlm.nih.gov/35738078/ · DOI 10.1016/j.colsurfb.2022.112625
    Complete structured claim and evidence
  59. Orthosilicic acid increased PI3K, phosphorylated Akt and mTOR together with osteogenic markers.

    Experimental context and source evidence
    evidence_access
    Primary abstract
    experimental_model
    Human osteoblast-like cell study.
    limitations
    No direct binding target or dietary requirement is established.
    nutrient_topic
    Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
    plain_language
    A growth-related pathway accompanied matrix production.
    primary_references
    Orthosilicic Acid Accelerates Bone Formation in Human Osteoblast-Like Cells Through the PI3K-Akt-mTOR Pathway. · 2019 · https://pubmed.ncbi.nlm.nih.gov/30421162/ · DOI 10.1007/s12011-018-1574-9

    Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 168–174

    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Human osteoblast-like cell study. · source_derived_draft · unverified_draft

    ## silica-pi3k-mtor A growth-related pathway accompanied matrix production. Orthosilicic acid increased PI3K, phosphorylated Akt and mTOR together with osteogenic markers. Model: Human osteoblast-like cell study. Limitations: No direct binding target or dietary requirement is established. Evidence access: Primary abstract Orthosilicic Acid Accelerates Bone Formation in Human Osteoblast-Like Cells Through the PI3K-Akt-mTOR Pathway. · 2019 · https://pubmed.ncbi.nlm.nih.gov/30421162/ · DOI 10.1007/s12011-018-1574-9
    Complete structured claim and evidence
  60. High extracellular potassium blocked silica-induced caspase-1 processing and IL-1 beta release, including during low-dose uptake blockade.

    Potassium ion → Mouse IL-1 beta source_derived_draftungraded
    Experimental context and source evidence
    evidence_access
    Primary full text
    experimental_model
    Mouse macrophages; 130 mM KCl experimental condition.
    limitations
    Not a potassium supplement treatment; no specific channel identity was established.
    nutrient_topic
    Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
    plain_language
    The potassium gradient gates this inflammatory response.
    primary_references
    Activation of NLRP3 inflammasome by crystalline structures via cell surface contact. · 2014 · https://pubmed.ncbi.nlm.nih.gov/25445147/ · DOI 10.1038/srep07281

    Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 480–486

    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Mouse macrophages; 130 mM KCl experimental condition. · source_derived_draft · unverified_draft

    ## silica-potassium-gate The potassium gradient gates this inflammatory response. High extracellular potassium blocked silica-induced caspase-1 processing and IL-1 beta release, including during low-dose uptake blockade. Model: Mouse macrophages; 130 mM KCl experimental condition. Limitations: Not a potassium supplement treatment; no specific channel identity was established. Evidence access: Primary full text Activation of NLRP3 inflammasome by crystalline structures via cell surface contact. · 2014 · https://pubmed.ncbi.nlm.nih.gov/25445147/ · DOI 10.1038/srep07281
    Complete structured claim and evidence
  61. Low-silicon diets reduced hydroxyproline in rat bone and wound sponges relative to supplemented diets.

    Experimental context and source evidence
    availability_state
    nutrient_deficiency Imported condition classification; unverified.
    evidence_access
    Primary abstract
    experimental_model
    Basal diets 2 or 2.6 micrograms Si/g; comparison added 10 micrograms Si/g as sodium metasilicate.
    limitations
    No validated human deficiency syndrome or blood threshold follows.
    nutrient_topic
    Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
    plain_language
    An animal low-intake model altered collagen-related endpoints.
    primary_references
    Silicon deprivation decreases collagen formation in wounds and bone, and ornithine transaminase enzyme activity in liver. · 2002 · https://pubmed.ncbi.nlm.nih.gov/12462748/ · DOI 10.1385/bter:89:3:251
    trigger_kind
    nutrient_deficiency Imported condition classification; unverified.

    Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 352–358

    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Basal diets 2 or 2.6 micrograms Si/g; comparison added 10 micrograms Si/g as sodium metasilicate. · source_derived_draft · unverified_draft

    ## silica-rat-deprivation-collagen An animal low-intake model altered collagen-related endpoints. Low-silicon diets reduced hydroxyproline in rat bone and wound sponges relative to supplemented diets. Model: Basal diets 2 or 2.6 micrograms Si/g; comparison added 10 micrograms Si/g as sodium metasilicate. Limitations: No validated human deficiency syndrome or blood threshold follows. Evidence access: Primary abstract Silicon deprivation decreases collagen formation in wounds and bone, and ornithine transaminase enzyme activity in liver. · 2002 · https://pubmed.ncbi.nlm.nih.gov/12462748/ · DOI 10.1385/bter:89:3:251
    Complete structured claim and evidence
  62. Rat liver ornithine aminotransferase activity decreased with silicon deprivation.

    Experimental context and source evidence
    availability_state
    nutrient_deficiency Imported condition classification; unverified.
    evidence_access
    Primary abstract
    experimental_model
    Rat dietary comparison; liver enzyme assay.
    limitations
    Activity change does not prove silicon is an OAT cofactor or a direct link to vitamin B6 depletion.
    nutrient_topic
    Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
    plain_language
    A proline-related metabolic enzyme changed alongside collagen endpoints.
    primary_references
    Silicon deprivation decreases collagen formation in wounds and bone, and ornithine transaminase enzyme activity in liver. · 2002 · https://pubmed.ncbi.nlm.nih.gov/12462748/ · DOI 10.1385/bter:89:3:251
    trigger_kind
    nutrient_deficiency Imported condition classification; unverified.

    Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 360–366

    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Rat dietary comparison; liver enzyme assay. · source_derived_draft · unverified_draft

    ## silica-rat-oat A proline-related metabolic enzyme changed alongside collagen endpoints. Rat liver ornithine aminotransferase activity decreased with silicon deprivation. Model: Rat dietary comparison; liver enzyme assay. Limitations: Activity change does not prove silicon is an OAT cofactor or a direct link to vitamin B6 depletion. Evidence access: Primary abstract Silicon deprivation decreases collagen formation in wounds and bone, and ornithine transaminase enzyme activity in liver. · 2002 · https://pubmed.ncbi.nlm.nih.gov/12462748/ · DOI 10.1385/bter:89:3:251
    Complete structured claim and evidence
  63. Reported silicon renal clearance was 82–96 mL/min and correlated with creatinine clearance.

    Experimental context and source evidence
    evidence_access
    Primary abstract
    experimental_model
    Healthy volunteer kinetics.
    limitations
    No universal tissue sufficiency threshold follows from serum or urine silicon.
    nutrient_topic
    Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
    plain_language
    Kidney function affects measured silicon handling.
    primary_references
    Silicic acid: its gastrointestinal uptake and urinary excretion in man and effects on aluminium excretion. · 1999 · https://pubmed.ncbi.nlm.nih.gov/10612067/ · DOI 10.1016/s0162-0134(99)00126-9

    Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 72–78

    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Healthy volunteer kinetics. · source_derived_draft · unverified_draft

    ## silica-renal-clearance Kidney function affects measured silicon handling. Reported silicon renal clearance was 82–96 mL/min and correlated with creatinine clearance. Model: Healthy volunteer kinetics. Limitations: No universal tissue sufficiency threshold follows from serum or urine silicon. Evidence access: Primary abstract Silicic acid: its gastrointestinal uptake and urinary excretion in man and effects on aluminium excretion. · 1999 · https://pubmed.ncbi.nlm.nih.gov/10612067/ · DOI 10.1016/s0162-0134(99)00126-9
    Complete structured claim and evidence
  64. Particle surface treatments linked nearly free silanols to membranolysis and inflammatory activity.

    Experimental context and source evidence
    evidence_access
    Primary full text
    experimental_model
    Characterized quartz/amorphous particles, membrane assays, macrophages and rat exposure program.
    limitations
    Surface motif is not a dissolved nutrient species; no oral-dose inference.
    nutrient_topic
    Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
    plain_language
    Surface chemistry helps explain why silica preparations differ.
    primary_references
    Nearly free surface silanols are the critical molecular moieties that initiate the toxicity of silica particles. · 2020 · https://pubmed.ncbi.nlm.nih.gov/33097669/ · DOI 10.1073/pnas.2008006117

    Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 392–398

    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Characterized quartz/amorphous particles, membrane assays, macrophages and rat exposure program. · source_derived_draft · unverified_draft

    ## silica-silanol-membrane Surface chemistry helps explain why silica preparations differ. Particle surface treatments linked nearly free silanols to membranolysis and inflammatory activity. Model: Characterized quartz/amorphous particles, membrane assays, macrophages and rat exposure program. Limitations: Surface motif is not a dissolved nutrient species; no oral-dose inference. Evidence access: Primary full text Nearly free surface silanols are the critical molecular moieties that initiate the toxicity of silica particles. · 2020 · https://pubmed.ncbi.nlm.nih.gov/33097669/ · DOI 10.1073/pnas.2008006117
    Complete structured claim and evidence
  65. Orthosilicic acid increased phosphorylated SMAD1/5 and RUNX2 expression alongside osteogenic markers.

    Experimental context and source evidence
    evidence_access
    Primary abstract
    experimental_model
    Human osteoblast-like cell lines, 10 micromolar exposure.
    limitations
    Marker regulation does not prove each edge by direct binding.
    nutrient_topic
    Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
    plain_language
    The response extended to downstream bone-development regulators.
    primary_references
    Biological Silicon Stimulates Collagen Type 1 and Osteocalcin Synthesis in Human Osteoblast-Like Cells Through the BMP-2/Smad/RUNX2 Signaling Pathway. · 2016 · https://pubmed.ncbi.nlm.nih.gov/27025722/ · DOI 10.1007/s12011-016-0686-3

    Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 152–158

    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Human osteoblast-like cell lines, 10 micromolar exposure. · source_derived_draft · unverified_draft

    ## silica-smad-runx2 The response extended to downstream bone-development regulators. Orthosilicic acid increased phosphorylated SMAD1/5 and RUNX2 expression alongside osteogenic markers. Model: Human osteoblast-like cell lines, 10 micromolar exposure. Limitations: Marker regulation does not prove each edge by direct binding. Evidence access: Primary abstract Biological Silicon Stimulates Collagen Type 1 and Osteocalcin Synthesis in Human Osteoblast-Like Cells Through the BMP-2/Smad/RUNX2 Signaling Pathway. · 2016 · https://pubmed.ncbi.nlm.nih.gov/27025722/ · DOI 10.1007/s12011-016-0686-3
    Complete structured claim and evidence
  66. Cytochalasin D blocked silica uptake and IL-1 beta release, supporting a phagocytosis-dependent interpretation.

    Experimental context and source evidence
    availability_state
    machinery_impairment Imported condition classification; unverified.
    evidence_access
    Primary full text
    experimental_model
    Mouse macrophages; related human PBMC result separately reported in the paper.
    limitations
    Inhibitor dose and non-uptake effects require comparison with later low-dose experiments. Correction record: A 2026 author correction replaces an erroneously duplicated lower-left Fig. 8c micrograph with the retrieved original. This is a figure correction, not a scientific contradiction or retraction. https://www.nature.com/articles/s41590-026-02468-9
    nutrient_topic
    Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
    plain_language
    Blocking engulfment also blocked inflammatory output in this experiment.
    primary_references
    Silica crystals and aluminum salts activate the NALP3 inflammasome through phagosomal destabilization. · 2008 · https://pubmed.ncbi.nlm.nih.gov/18604214/ · DOI 10.1038/ni.1631
    trigger_kind
    machinery_impairment Imported condition classification; unverified.

    Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 432–438

    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Mouse macrophages; related human PBMC result separately reported in the paper. · source_derived_draft · unverified_draft

    ## silica-uptake-block-2008 Blocking engulfment also blocked inflammatory output in this experiment. Cytochalasin D blocked silica uptake and IL-1 beta release, supporting a phagocytosis-dependent interpretation. Model: Mouse macrophages; related human PBMC result separately reported in the paper. Limitations: Inhibitor dose and non-uptake effects require comparison with later low-dose experiments. Correction record: A 2026 author correction replaces an erroneously duplicated lower-left Fig. 8c micrograph with the retrieved original. This is a figure correction, not a scientific contradiction or retraction. https://www.nature.com/articles/s41590-026-02468-9 Evidence access: Primary full text Silica crystals and aluminum salts activate the NALP3 inflammasome through phagosomal destabilization. · 2008 · https://pubmed.ncbi.nlm.nih.gov/18604214/ · DOI 10.1038/ni.1631
    Complete structured claim and evidence
  67. Low-dose cytochalasin D blocked silica engulfment while preserving caspase-1 processing and IL-1 beta release.

    Experimental context and source evidence
    evidence_access
    Primary full text
    experimental_model
    Mouse bone-marrow macrophages; 0.25–0.5 micromolar cytochalasin D.
    limitations
    Immobilized epoxy-crystal experiments used MSU, not silica; do not transfer that detail between materials.
    nutrient_topic
    Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
    plain_language
    Surface-associated crystals could still trigger a response when uptake was blocked.
    primary_references
    Activation of NLRP3 inflammasome by crystalline structures via cell surface contact. · 2014 · https://pubmed.ncbi.nlm.nih.gov/25445147/ · DOI 10.1038/srep07281

    Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 464–470

    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Mouse bone-marrow macrophages; 0.25–0.5 micromolar cytochalasin D. · source_derived_draft · unverified_draft

    ## silica-uptake-block-2014 Surface-associated crystals could still trigger a response when uptake was blocked. Low-dose cytochalasin D blocked silica engulfment while preserving caspase-1 processing and IL-1 beta release. Model: Mouse bone-marrow macrophages; 0.25–0.5 micromolar cytochalasin D. Limitations: Immobilized epoxy-crystal experiments used MSU, not silica; do not transfer that detail between materials. Evidence access: Primary full text Activation of NLRP3 inflammasome by crystalline structures via cell surface contact. · 2014 · https://pubmed.ncbi.nlm.nih.gov/25445147/ · DOI 10.1038/srep07281
    Complete structured claim and evidence

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