Component
Phosphatidylcholine
Independent biological entity. Read linked claims for experimental scope and context.
24 recorded relationships. Experimental role, claim status and evidence remain attached to each record.
How nutrients influence it
Every nutrient with a recorded effect on this component, credited to the nutrient that acted rather than the chapter that recorded it. Open a nutrient to see the findings and the conditions they were measured under.
Other things that act on it
Enzymes, hormones, genes, and other components with a recorded effect. These are not nutrients, so they do not count toward the arrows above. Each finding names the chapter that recorded it.
How nutrients reach it in more than one step
Chains of two or more recorded steps that end here, grouped by the nutrient they start from. Each step is a separate finding, so a chain is a route a mechanism could take, not proof that it does.
Tracing routes…
What it does
Every recorded relationship this component is part of, grouped by its role. Plain wording comes first; the technical statement follows.
What it acts on
A CoQ variant competed with phosphatidylcholine for binding to purified STARD7.
Experimental context and source evidence
- evidence_span
- {"source_cache": "artifacts/coq10-research/36658222.abstract.txt", "locator": "Primary indexed abstract; zero-based, end-exclusive Unicode character offsets", "file_sha256": "8cd5c486ecb31ad03ea06a817eb5bc56e60abdfa8ae8d50a46502974be2898ce", "start_char": 0, "end_char": 1410, "text_sha256": "8cd5c486ecb31ad03ea06a817eb5bc56e60abdfa8ae8d50a46502974be2898ce"}
- experimental_model
- Protein processing, localization, transport and cell-growth experiments
- exposure
- PARL processing and compartment-specific STARD7 expression
- limitations
- Purified-protein binding with a CoQ variant; not demonstrated dietary choline competition with CoQ10 absorption.
- nutrient_topic
- Coenzyme Q10 research collection; topical membership is not evidence of a direct dietary effect. · Coenzyme Q10 / CoQ10 redox system
- organism
- Mammalian cell models
- plain_language
- Choline-containing membrane lipid and a CoQ analogue shared access to a transport protein.
- primary_references
- [coq10-p36658222] Mitochondria regulate intracellular coenzyme Q transport and ferroptotic resistance via STARD7. (2023). https://pubmed.ncbi.nlm.nih.gov/36658222/ DOI: 10.1038/s41556-022-01071-y
- tissue_or_cell_type
- Mitochondria and plasma membrane
Coenzyme Q10: biosynthesis, electron transfer, antioxidant recycling and nutrient interactions (2026-09-17) · lines 502–513
AI-assisted literature curation; primary study URLs and scope retained in the document and extraction. Not publisher full text. · supports · Protein processing, localization, transport and cell-growth experiments · source_derived_draft · unverified_draft
### coq10-stard7-pc A CoQ variant competed with phosphatidylcholine for binding to purified STARD7. Condition category: normal nutrient_topic: Coenzyme Q10 research collection; topical membership is not evidence of a direct dietary effect. plain_language: Choline-containing membrane lipid and a CoQ analogue shared access to a transport protein. organism: Mammalian cell models tissue_or_cell_type: Mitochondria and plasma membrane experimental_model: Protein processing, localization, transport and cell-growth experiments limitations: Purified-protein binding with a CoQ variant; not demonstrated dietary choline competition with CoQ10 absorption. exposure: PARL processing and compartment-specific STARD7 expression evidence_span: {"source_cache": "artifacts/coq10-research/36658222.abstract.txt", "locator": "Primary indexed abstract; zero-based, end-exclusive Unicode character offsets", "file_sha256": "8cd5c486ecb31ad03ea06a817eb5bc56e60abdfa8ae8d50a46502974be2898ce", "start_char": 0, "end_char": 1410, "text_sha256": "8cd5c486ecb31ad03ea06a817eb5bc56e60abdfa8ae8d50a46502974be2898ce"} [coq10-p36658222] Mitochondria regulate intracellular coenzyme Q transport and ferroptotic resistance via STARD7. (2023). https://pubmed.ncbi.nlm.nih.gov/36658222/ DOI: 10.1038/s41556-022-01071-y
Complete structured claim and evidenceHuman-heart mitochondrial BDH1 was described as specifically requiring phosphatidylcholine for enzymic activity.
Experimental context and source evidence
- evidence_access
- Primary abstract
- experimental_model
- Primary human-heart enzyme cloning and characterization.
- limitations
- Does not establish that supplemental choline increases ketone use.
- nutrient_topic
- Fasting physiological-state collection; human protocols, cellular deprivation and refeeding are distinguished. · Fasting / abstention from energy intake
- plain_language
- A membrane lipid linked to choline supports a ketone enzyme.
- primary_references
- Molecular cloning and characterization of (R)-3-hydroxybutyrate dehydrogenase from human heart. · 1992 · https://pubmed.ncbi.nlm.nih.gov/1639787/
Fasting: fuel switching, nutrient sensing, ketone signaling, nutrient dependencies and refeeding (2026-09-18) · lines 136–142
AI-assisted research curation; primary-abstract references and experimental limitations individually identified. Not publisher full text. · supports · Primary human-heart enzyme cloning and characterization. · source_derived_draft · unverified_draft
## fast-bdh-choline A membrane lipid linked to choline supports a ketone enzyme. Human-heart mitochondrial BDH1 was described as specifically requiring phosphatidylcholine for enzymic activity. Model: Primary human-heart enzyme cloning and characterization. Limitations: Does not establish that supplemental choline increases ketone use. Evidence access: Primary abstract Molecular cloning and characterization of (R)-3-hydroxybutyrate dehydrogenase from human heart. · 1992 · https://pubmed.ncbi.nlm.nih.gov/1639787/
Complete structured claim and evidenceHuman and rat liver LRAT activity transferred the sn-1 acyl group of phosphatidylcholine to CRBP-bound retinol.
Experimental context and source evidence
- cross_nutrient
- Phosphatidylcholine-dependent retinol storage links retinoid metabolism to choline-containing phospholipid availability.
- evidence_location
- Abstract
- experimental_model
- Human and rat liver microsomes supplied phosphatidylcholine and CRBP-bound retinol.
- exposure
- Exogenous phosphatidylcholine plus CRBP-bound retinol.
- limitations
- Biochemical donor requirement; dietary choline deficiency was not tested.
- nutrient_topic
- Vitamin A research collection; topical membership is not evidence of a direct dietary effect. · Vitamin A
- organism
- Homo sapiens and Rattus norvegicus
- outcome
- Human and rat liver LRAT activity transferred the sn-1 acyl group of phosphatidylcholine to CRBP-bound retinol.
- plain_language
- A membrane choline phospholipid supplies the fatty-acid group used to store vitamin A.
- primary_references
- [va-macdonald-1988] A lecithin:retinol acyltransferase activity in human and rat liver (1988). https://pubmed.ncbi.nlm.nih.gov/3178828/ DOI: 10.1016/S0006-291X(88)80818-0
- tissue_or_cell_type
- Liver microsomes
Vitamin A: forms, mechanisms, deficiency and excess (2026-09-17) · lines 317–330
AI-assisted literature curation; primary study URLs and scope retained in the document and extraction. Not publisher full text. · supports · Human and rat liver microsomes supplied phosphatidylcholine and CRBP-bound retinol. · source_derived_draft · unverified_draft
### va-lrat-phosphatidylcholine-donor Human and rat liver LRAT activity transferred the sn-1 acyl group of phosphatidylcholine to CRBP-bound retinol. Condition category: normal nutrient_topic: Vitamin A research collection; topical membership is not evidence of a direct dietary effect. plain_language: A membrane choline phospholipid supplies the fatty-acid group used to store vitamin A. organism: Homo sapiens and Rattus norvegicus tissue_or_cell_type: Liver microsomes experimental_model: Human and rat liver microsomes supplied phosphatidylcholine and CRBP-bound retinol. limitations: Biochemical donor requirement; dietary choline deficiency was not tested. exposure: Exogenous phosphatidylcholine plus CRBP-bound retinol. outcome: Human and rat liver LRAT activity transferred the sn-1 acyl group of phosphatidylcholine to CRBP-bound retinol. evidence_location: Abstract cross_nutrient: Phosphatidylcholine-dependent retinol storage links retinoid metabolism to choline-containing phospholipid availability. [va-macdonald-1988] A lecithin:retinol acyltransferase activity in human and rat liver (1988). https://pubmed.ncbi.nlm.nih.gov/3178828/ DOI: 10.1016/S0006-291X(88)80818-0
Complete structured claim and evidence
What acts on it
CEPT1 can catalyze PC production as well as PE production.
Experimental context and source evidence
- evidence_span
- {"source_cache": "artifacts/choline-research/40435706.abstract.txt", "locator": "Primary indexed abstract; zero-based, end-exclusive Unicode character offsets", "file_sha256": "d08b2ce68e8731e88e1204dc1b09d1301020452752a630a880ec3a2cdb0f2351", "start_char": 0, "end_char": 1339, "text_sha256": "d08b2ce68e8731e88e1204dc1b09d1301020452752a630a880ec3a2cdb0f2351"}
- experimental_model
- Human CHPT1 cryo-EM, sequence analysis and biochemical characterization
- exposure
- CDP-choline/CDP-ethanolamine substrate selectivity
- limitations
- Human CHPT1 and CEPT1 remain separate. Evolutionary suggestions about oviparous species are not asserted as human bifunctionality.
- nutrient_topic
- Choline research collection; topical membership is not evidence of a direct dietary effect. · Choline
- organism
- Human proteins; evolutionary comparisons explicitly separate
- plain_language
- A separate terminal enzyme can serve both headgroup pathways.
- primary_references
- [choline-p40435706] Structural basis for substrate selectivity and evolutionary insights into human choline phosphotransferase 1. (2025). https://pubmed.ncbi.nlm.nih.gov/40435706/ DOI: 10.1016/j.bbrc.2025.152082
- tissue_or_cell_type
- Membrane phospholipid synthesis
Choline: metabolism, signaling and nutrient connections (2026-09-17) · lines 776–787
AI-assisted literature curation; primary study URLs and scope retained in the document and extraction. Not publisher full text. · supports · Human CHPT1 cryo-EM, sequence analysis and biochemical characterization · source_derived_draft · unverified_draft
### choline-cept1-pc CEPT1 can catalyze PC production as well as PE production. Condition category: normal nutrient_topic: Choline research collection; topical membership is not evidence of a direct dietary effect. plain_language: A separate terminal enzyme can serve both headgroup pathways. organism: Human proteins; evolutionary comparisons explicitly separate tissue_or_cell_type: Membrane phospholipid synthesis experimental_model: Human CHPT1 cryo-EM, sequence analysis and biochemical characterization limitations: Human CHPT1 and CEPT1 remain separate. Evolutionary suggestions about oviparous species are not asserted as human bifunctionality. exposure: CDP-choline/CDP-ethanolamine substrate selectivity evidence_span: {"source_cache": "artifacts/choline-research/40435706.abstract.txt", "locator": "Primary indexed abstract; zero-based, end-exclusive Unicode character offsets", "file_sha256": "d08b2ce68e8731e88e1204dc1b09d1301020452752a630a880ec3a2cdb0f2351", "start_char": 0, "end_char": 1339, "text_sha256": "d08b2ce68e8731e88e1204dc1b09d1301020452752a630a880ec3a2cdb0f2351"} [choline-p40435706] Structural basis for substrate selectivity and evolutionary insights into human choline phosphotransferase 1. (2025). https://pubmed.ncbi.nlm.nih.gov/40435706/ DOI: 10.1016/j.bbrc.2025.152082
Complete structured claim and evidenceHuman CHPT1 catalyzes the PC-producing final step of the Kennedy pathway with choline-headgroup substrate selectivity.
Experimental context and source evidence
- evidence_span
- {"source_cache": "artifacts/choline-research/40435706.abstract.txt", "locator": "Primary indexed abstract; zero-based, end-exclusive Unicode character offsets", "file_sha256": "d08b2ce68e8731e88e1204dc1b09d1301020452752a630a880ec3a2cdb0f2351", "start_char": 0, "end_char": 1339, "text_sha256": "d08b2ce68e8731e88e1204dc1b09d1301020452752a630a880ec3a2cdb0f2351"}
- experimental_model
- Human CHPT1 cryo-EM, sequence analysis and biochemical characterization
- exposure
- CDP-choline/CDP-ethanolamine substrate selectivity
- limitations
- Human CHPT1 and CEPT1 remain separate. Evolutionary suggestions about oviparous species are not asserted as human bifunctionality.
- nutrient_topic
- Choline research collection; topical membership is not evidence of a direct dietary effect. · Choline
- organism
- Human proteins; evolutionary comparisons explicitly separate
- plain_language
- One terminal enzyme specializes in making phosphatidylcholine.
- primary_references
- [choline-p40435706] Structural basis for substrate selectivity and evolutionary insights into human choline phosphotransferase 1. (2025). https://pubmed.ncbi.nlm.nih.gov/40435706/ DOI: 10.1016/j.bbrc.2025.152082
- tissue_or_cell_type
- Membrane phospholipid synthesis
Choline: metabolism, signaling and nutrient connections (2026-09-17) · lines 763–774
AI-assisted literature curation; primary study URLs and scope retained in the document and extraction. Not publisher full text. · supports · Human CHPT1 cryo-EM, sequence analysis and biochemical characterization · source_derived_draft · unverified_draft
### choline-chpt1-pc Human CHPT1 catalyzes the PC-producing final step of the Kennedy pathway with choline-headgroup substrate selectivity. Condition category: normal nutrient_topic: Choline research collection; topical membership is not evidence of a direct dietary effect. plain_language: One terminal enzyme specializes in making phosphatidylcholine. organism: Human proteins; evolutionary comparisons explicitly separate tissue_or_cell_type: Membrane phospholipid synthesis experimental_model: Human CHPT1 cryo-EM, sequence analysis and biochemical characterization limitations: Human CHPT1 and CEPT1 remain separate. Evolutionary suggestions about oviparous species are not asserted as human bifunctionality. exposure: CDP-choline/CDP-ethanolamine substrate selectivity evidence_span: {"source_cache": "artifacts/choline-research/40435706.abstract.txt", "locator": "Primary indexed abstract; zero-based, end-exclusive Unicode character offsets", "file_sha256": "d08b2ce68e8731e88e1204dc1b09d1301020452752a630a880ec3a2cdb0f2351", "start_char": 0, "end_char": 1339, "text_sha256": "d08b2ce68e8731e88e1204dc1b09d1301020452752a630a880ec3a2cdb0f2351"} [choline-p40435706] Structural basis for substrate selectivity and evolutionary insights into human choline phosphotransferase 1. (2025). https://pubmed.ncbi.nlm.nih.gov/40435706/ DOI: 10.1016/j.bbrc.2025.152082
Complete structured claim and evidenceNFS-rich silica strongly adsorbed zwitterionic phospholipid assemblies and disrupted their order more than negatively charged liposomes.
Experimental context and source evidence
- evidence_access
- Primary full text
- experimental_model
- Model membranes and computational recognition analysis.
- limitations
- Membrane interaction is not evidence that choline intake increases silica injury or protects against it.
- nutrient_topic
- Silica collection; molecular form, preparation, species, exposure and manipulation remain explicit. · Silica and soluble silicon
- plain_language
- The phosphocholine headgroup creates a molecular link to membrane composition.
- primary_references
- Molecular recognition between membrane epitopes and nearly free surface silanols explains silica membranolytic activity. · 2022 · https://pubmed.ncbi.nlm.nih.gov/35738078/ · DOI 10.1016/j.colsurfb.2022.112625
Silica: soluble silicon, cellular transport and particle-specific mechanisms (2026-09-19) · lines 400–406
AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Model membranes and computational recognition analysis. · source_derived_draft · unverified_draft
## silica-phosphocholine-recognition The phosphocholine headgroup creates a molecular link to membrane composition. NFS-rich silica strongly adsorbed zwitterionic phospholipid assemblies and disrupted their order more than negatively charged liposomes. Model: Model membranes and computational recognition analysis. Limitations: Membrane interaction is not evidence that choline intake increases silica injury or protects against it. Evidence access: Primary full text Molecular recognition between membrane epitopes and nearly free surface silanols explains silica membranolytic activity. · 2022 · https://pubmed.ncbi.nlm.nih.gov/35738078/ · DOI 10.1016/j.colsurfb.2022.112625
Complete structured claim and evidenceMen on the combined low-folate/low-choline diet showed 26% lower plasma phosphatidylcholine.
Experimental context and source evidence
- availability_state
- nutrient_deficiency Imported condition classification; unverified.
- cross_nutrient
- Folate/choline restriction affects circulating phospholipid.
- experimental_model
- Metabolic-unit depletion/repletion: 11 men, 10 women.
- limitations
- Male cohort; concentration does not identify biosynthetic flux.
- nutrient_topic
- Folate and folic acid research collection; topical membership is not evidence of a direct dietary effect. · Folate (vitamin B9)
- organism
- Homo sapiens
- plain_language
- A choline-containing lipid also declined.
- primary_references
- [jacob-1999] Folate nutriture alters choline status of women and men fed low choline diets (1999). https://pubmed.ncbi.nlm.nih.gov/10082779/ DOI: 10.1093/jn/129.3.712
- tissue_or_cell_type
- Plasma
- trigger_kind
- nutrient_deficiency Imported condition classification; unverified.
Folate and folic acid: mechanisms, deficiency and nutrient interactions (2026-09-17) · lines 706–716
AI-assisted literature curation; primary study URLs and scope retained in the document and extraction. Not publisher full text. · supports · Metabolic-unit depletion/repletion: 11 men, 10 women. · source_derived_draft · unverified_draft
### folate-methyl-low-folate-pc Men on the combined low-folate/low-choline diet showed 26% lower plasma phosphatidylcholine. Condition category: nutrient_deficiency nutrient_topic: Folate and folic acid research collection; topical membership is not evidence of a direct dietary effect. plain_language: A choline-containing lipid also declined. organism: Homo sapiens tissue_or_cell_type: Plasma experimental_model: Metabolic-unit depletion/repletion: 11 men, 10 women. limitations: Male cohort; concentration does not identify biosynthetic flux. cross_nutrient: Folate/choline restriction affects circulating phospholipid. [jacob-1999] Folate nutriture alters choline status of women and men fed low choline diets (1999). https://pubmed.ncbi.nlm.nih.gov/10082779/ DOI: 10.1093/jn/129.3.712
Complete structured claim and evidenceHuman CCTbeta expression enhanced radiolabeling of phosphatidylcholine in COS-7 cells.
Experimental context and source evidence
- evidence_span
- {"source_cache": "artifacts/phosphorus-research/9593753.abstract.txt", "locator": "Primary indexed abstract; zero-based, end-exclusive Unicode character offsets", "file_sha256": "6ed2c0c0ceaa7eb2efb90c66565bae51b71023f77cdd0224159fd9814e3b7d45", "start_char": 0, "end_char": 1766, "text_sha256": "6ed2c0c0ceaa7eb2efb90c66565bae51b71023f77cdd0224159fd9814e3b7d45"}
- experimental_model
- Human isoform cloning and COS-7 expression studies
- exposure
- CCTbeta transfection and catalytic assays with lipid regulators
- limitations
- Expression-system findings; maximum activity required lipid regulators. Do not generalize the early clone to every subsequently described splice variant.
- nutrient_topic
- Phosphorus research collection; topical membership is not evidence of a direct dietary effect. · Phosphorus
- organism
- Human PCYT1B expressed in African-green-monkey-derived COS-7 cells
- plain_language
- The pathway feeds a phosphorus-containing membrane lipid; it is distinct from free phosphate transport.
- primary_references
- [phosphorus-p9593753] Cloning and characterization of a second human CTP:phosphocholine cytidylyltransferase. (1998). https://pubmed.ncbi.nlm.nih.gov/9593753/ DOI: 10.1074/jbc.273.22.14022
- tissue_or_cell_type
- Cytoplasm and phospholipid biosynthesis
Phosphorus: metabolism, signaling and nutrient connections (2026-09-17) · lines 711–722
AI-assisted literature curation; primary study URLs and scope retained in the document and extraction. Not publisher full text. · supports · Human isoform cloning and COS-7 expression studies · source_derived_draft · unverified_draft
### phosphorus-pcyt-lipid Human CCTbeta expression enhanced radiolabeling of phosphatidylcholine in COS-7 cells. Condition category: normal nutrient_topic: Phosphorus research collection; topical membership is not evidence of a direct dietary effect. plain_language: The pathway feeds a phosphorus-containing membrane lipid; it is distinct from free phosphate transport. organism: Human PCYT1B expressed in African-green-monkey-derived COS-7 cells tissue_or_cell_type: Cytoplasm and phospholipid biosynthesis experimental_model: Human isoform cloning and COS-7 expression studies limitations: Expression-system findings; maximum activity required lipid regulators. Do not generalize the early clone to every subsequently described splice variant. exposure: CCTbeta transfection and catalytic assays with lipid regulators evidence_span: {"source_cache": "artifacts/phosphorus-research/9593753.abstract.txt", "locator": "Primary indexed abstract; zero-based, end-exclusive Unicode character offsets", "file_sha256": "6ed2c0c0ceaa7eb2efb90c66565bae51b71023f77cdd0224159fd9814e3b7d45", "start_char": 0, "end_char": 1766, "text_sha256": "6ed2c0c0ceaa7eb2efb90c66565bae51b71023f77cdd0224159fd9814e3b7d45"} [phosphorus-p9593753] Cloning and characterization of a second human CTP:phosphocholine cytidylyltransferase. (1998). https://pubmed.ncbi.nlm.nih.gov/9593753/ DOI: 10.1074/jbc.273.22.14022
Complete structured claim and evidence
Where it participates (unsigned role)
Experimental manipulation supported a causal role for the lowered PC/PE ratio in loss of hepatocyte membrane integrity.
Experimental context and source evidence
- availability_state
- nutrient_deficiency Imported condition classification; unverified.
- evidence_span
- {"source_cache": "artifacts/choline-research/16679290.abstract.txt", "locator": "Primary indexed abstract; zero-based, end-exclusive Unicode character offsets", "file_sha256": "656910ebe959c2867cac5d7cb75341ba3974ff922e584274829161326f10cf4d", "start_char": 0, "end_char": 1016, "text_sha256": "656910ebe959c2867cac5d7cb75341ba3974ff922e584274829161326f10cf4d"}
- experimental_model
- Dietary depletion and Pemt/Mdr2 mouse genetics
- exposure
- Choline-deficient feeding in Pemt-null and double-null mice
- limitations
- A combined diet/genotype model; total PC amount, PC/PE ratio and membrane damage are not interchangeable measurements.
- nutrient_topic
- Choline research collection; topical membership is not evidence of a direct dietary effect. · Choline
- organism
- Mouse, with separate human tissue comparison in the paper
- plain_language
- The balance between two membrane lipids mattered, not just one concentration.
- primary_references
- [choline-p16679290] The ratio of phosphatidylcholine to phosphatidylethanolamine influences membrane integrity and steatohepatitis. (2006). https://pubmed.ncbi.nlm.nih.gov/16679290/ DOI: 10.1016/j.cmet.2006.03.007
- tissue_or_cell_type
- Hepatic membranes
- trigger_kind
- nutrient_deficiency Imported condition classification; unverified.
Choline: metabolism, signaling and nutrient connections (2026-09-17) · lines 906–917
AI-assisted literature curation; primary study URLs and scope retained in the document and extraction. Not publisher full text. · supports · Dietary depletion and Pemt/Mdr2 mouse genetics · source_derived_draft · unverified_draft
### choline-pc-pe-membrane Experimental manipulation supported a causal role for the lowered PC/PE ratio in loss of hepatocyte membrane integrity. Condition category: nutrient_deficiency nutrient_topic: Choline research collection; topical membership is not evidence of a direct dietary effect. plain_language: The balance between two membrane lipids mattered, not just one concentration. organism: Mouse, with separate human tissue comparison in the paper tissue_or_cell_type: Hepatic membranes experimental_model: Dietary depletion and Pemt/Mdr2 mouse genetics limitations: A combined diet/genotype model; total PC amount, PC/PE ratio and membrane damage are not interchangeable measurements. exposure: Choline-deficient feeding in Pemt-null and double-null mice evidence_span: {"source_cache": "artifacts/choline-research/16679290.abstract.txt", "locator": "Primary indexed abstract; zero-based, end-exclusive Unicode character offsets", "file_sha256": "656910ebe959c2867cac5d7cb75341ba3974ff922e584274829161326f10cf4d", "start_char": 0, "end_char": 1016, "text_sha256": "656910ebe959c2867cac5d7cb75341ba3974ff922e584274829161326f10cf4d"} [choline-p16679290] The ratio of phosphatidylcholine to phosphatidylethanolamine influences membrane integrity and steatohepatitis. (2006). https://pubmed.ncbi.nlm.nih.gov/16679290/ DOI: 10.1016/j.cmet.2006.03.007
Complete structured claim and evidenceThe challenge produced time-dependent increases in TMAO and its d9-labeled isotopologue.
Experimental context and source evidence
- evidence_span
- {"source_cache": "artifacts/choline-research/23614584.abstract.txt", "locator": "Primary indexed abstract; zero-based, end-exclusive Unicode character offsets", "file_sha256": "9de33f54f0fce1c470cc96c18163574d26fc5c56802e60771c75fdacc5804e0a", "start_char": 0, "end_char": 2119, "text_sha256": "9de33f54f0fce1c470cc96c18163574d26fc5c56802e60771c75fdacc5804e0a"}
- experimental_model
- Human isotope challenge with antibiotics plus a separate observational cohort
- exposure
- Two eggs plus d9-PC before/after antibiotics; three-year event follow-up
- limitations
- The challenge establishes microbiota involvement; the outcome cohort establishes association, not that avoiding choline or eggs prevents events.
- nutrient_topic
- Choline research collection; topical membership is not evidence of a direct dietary effect. · Choline
- organism
- Human
- plain_language
- A label on dietary PC appeared in the downstream microbial-host product.
- primary_references
- [choline-p23614584] Intestinal microbial metabolism of phosphatidylcholine and cardiovascular risk. (2013). https://pubmed.ncbi.nlm.nih.gov/23614584/ DOI: 10.1056/nejmoa1109400
- tissue_or_cell_type
- Healthy challenge participants; 4007 angiography patients in the outcome cohort
Choline: metabolism, signaling and nutrient connections (2026-09-17) · lines 1140–1151
AI-assisted literature curation; primary study URLs and scope retained in the document and extraction. Not publisher full text. · supports · Human isotope challenge with antibiotics plus a separate observational cohort · source_derived_draft · unverified_draft
### choline-pc-tmao-tracing The challenge produced time-dependent increases in TMAO and its d9-labeled isotopologue. Condition category: normal nutrient_topic: Choline research collection; topical membership is not evidence of a direct dietary effect. plain_language: A label on dietary PC appeared in the downstream microbial-host product. organism: Human tissue_or_cell_type: Healthy challenge participants; 4007 angiography patients in the outcome cohort experimental_model: Human isotope challenge with antibiotics plus a separate observational cohort limitations: The challenge establishes microbiota involvement; the outcome cohort establishes association, not that avoiding choline or eggs prevents events. exposure: Two eggs plus d9-PC before/after antibiotics; three-year event follow-up evidence_span: {"source_cache": "artifacts/choline-research/23614584.abstract.txt", "locator": "Primary indexed abstract; zero-based, end-exclusive Unicode character offsets", "file_sha256": "9de33f54f0fce1c470cc96c18163574d26fc5c56802e60771c75fdacc5804e0a", "start_char": 0, "end_char": 2119, "text_sha256": "9de33f54f0fce1c470cc96c18163574d26fc5c56802e60771c75fdacc5804e0a"} [choline-p23614584] Intestinal microbial metabolism of phosphatidylcholine and cardiovascular risk. (2013). https://pubmed.ncbi.nlm.nih.gov/23614584/ DOI: 10.1056/nejmoa1109400
Complete structured claim and evidencePEMT converts PE to PC through three sequential SAM-dependent methylation reactions.
Experimental context and source evidence
- evidence_span
- {"source_cache": "artifacts/choline-research/12431977.abstract.txt", "locator": "Primary indexed abstract; zero-based, end-exclusive Unicode character offsets", "file_sha256": "7c299a547408772f2f24bdd77f2f22dc8ea9e5aaf8179150f2d8b59c9713306a", "start_char": 0, "end_char": 1380, "text_sha256": "7c299a547408772f2f24bdd77f2f22dc8ea9e5aaf8179150f2d8b59c9713306a"}
- experimental_model
- Human liver fractionation and recombinant PEMT membrane-topology experiments
- exposure
- Protein cleavage mapping and methyltransferase localization
- limitations
- Three methyl transfers make a choline-containing phospholipid; PEMT does not directly synthesize free choline from nothing.
- nutrient_topic
- Choline research collection; topical membership is not evidence of a direct dietary effect. · Choline
- organism
- Human enzyme
- plain_language
- The body can build a choline headgroup in a membrane lipid by spending methyl groups.
- primary_references
- [choline-p12431977] Membrane topography of human phosphatidylethanolamine N-methyltransferase. (2003). https://pubmed.ncbi.nlm.nih.gov/12431977/ DOI: 10.1074/jbc.m210904200
- tissue_or_cell_type
- ER and mitochondria-associated membranes
Choline: metabolism, signaling and nutrient connections (2026-09-17) · lines 802–813
AI-assisted literature curation; primary study URLs and scope retained in the document and extraction. Not publisher full text. · supports · Human liver fractionation and recombinant PEMT membrane-topology experiments · source_derived_draft · unverified_draft
### choline-pemt-pc PEMT converts PE to PC through three sequential SAM-dependent methylation reactions. Condition category: normal nutrient_topic: Choline research collection; topical membership is not evidence of a direct dietary effect. plain_language: The body can build a choline headgroup in a membrane lipid by spending methyl groups. organism: Human enzyme tissue_or_cell_type: ER and mitochondria-associated membranes experimental_model: Human liver fractionation and recombinant PEMT membrane-topology experiments limitations: Three methyl transfers make a choline-containing phospholipid; PEMT does not directly synthesize free choline from nothing. exposure: Protein cleavage mapping and methyltransferase localization evidence_span: {"source_cache": "artifacts/choline-research/12431977.abstract.txt", "locator": "Primary indexed abstract; zero-based, end-exclusive Unicode character offsets", "file_sha256": "7c299a547408772f2f24bdd77f2f22dc8ea9e5aaf8179150f2d8b59c9713306a", "start_char": 0, "end_char": 1380, "text_sha256": "7c299a547408772f2f24bdd77f2f22dc8ea9e5aaf8179150f2d8b59c9713306a"} [choline-p12431977] Membrane topography of human phosphatidylethanolamine N-methyltransferase. (2003). https://pubmed.ncbi.nlm.nih.gov/12431977/ DOI: 10.1074/jbc.m210904200
Complete structured claim and evidenceSAM supplies the methyl groups for each of the three PEMT-catalyzed transfers.
Experimental context and source evidence
- evidence_span
- {"source_cache": "artifacts/choline-research/12431977.abstract.txt", "locator": "Primary indexed abstract; zero-based, end-exclusive Unicode character offsets", "file_sha256": "7c299a547408772f2f24bdd77f2f22dc8ea9e5aaf8179150f2d8b59c9713306a", "start_char": 0, "end_char": 1380, "text_sha256": "7c299a547408772f2f24bdd77f2f22dc8ea9e5aaf8179150f2d8b59c9713306a"}
- experimental_model
- Human liver fractionation and recombinant PEMT membrane-topology experiments
- exposure
- Protein cleavage mapping and methyltransferase localization
- limitations
- Three methyl transfers make a choline-containing phospholipid; PEMT does not directly synthesize free choline from nothing.
- nutrient_topic
- Choline research collection; topical membership is not evidence of a direct dietary effect. · Choline
- organism
- Human enzyme
- plain_language
- Membrane PC synthesis and the methyl-donor pool are connected.
- primary_references
- [choline-p12431977] Membrane topography of human phosphatidylethanolamine N-methyltransferase. (2003). https://pubmed.ncbi.nlm.nih.gov/12431977/ DOI: 10.1074/jbc.m210904200
- tissue_or_cell_type
- ER and mitochondria-associated membranes
Choline: metabolism, signaling and nutrient connections (2026-09-17) · lines 815–826
AI-assisted literature curation; primary study URLs and scope retained in the document and extraction. Not publisher full text. · supports · Human liver fractionation and recombinant PEMT membrane-topology experiments · source_derived_draft · unverified_draft
### choline-pemt-sam SAM supplies the methyl groups for each of the three PEMT-catalyzed transfers. Condition category: normal nutrient_topic: Choline research collection; topical membership is not evidence of a direct dietary effect. plain_language: Membrane PC synthesis and the methyl-donor pool are connected. organism: Human enzyme tissue_or_cell_type: ER and mitochondria-associated membranes experimental_model: Human liver fractionation and recombinant PEMT membrane-topology experiments limitations: Three methyl transfers make a choline-containing phospholipid; PEMT does not directly synthesize free choline from nothing. exposure: Protein cleavage mapping and methyltransferase localization evidence_span: {"source_cache": "artifacts/choline-research/12431977.abstract.txt", "locator": "Primary indexed abstract; zero-based, end-exclusive Unicode character offsets", "file_sha256": "7c299a547408772f2f24bdd77f2f22dc8ea9e5aaf8179150f2d8b59c9713306a", "start_char": 0, "end_char": 1380, "text_sha256": "7c299a547408772f2f24bdd77f2f22dc8ea9e5aaf8179150f2d8b59c9713306a"} [choline-p12431977] Membrane topography of human phosphatidylethanolamine N-methyltransferase. (2003). https://pubmed.ncbi.nlm.nih.gov/12431977/ DOI: 10.1074/jbc.m210904200
Complete structured claim and evidencePemt deletion modestly reduced hepatic VLDL secretion in Ldlr-null mice.
Experimental context and source evidence
- evidence_span
- {"source_cache": "artifacts/choline-research/19520976.abstract.txt", "locator": "Primary indexed abstract; zero-based, end-exclusive Unicode character offsets", "file_sha256": "57c952bdb4e387632c90b6dcc00ab5f0c600047b7e78bb179c08f6ccd62704d0", "start_char": 0, "end_char": 1537, "text_sha256": "57c952bdb4e387632c90b6dcc00ab5f0c600047b7e78bb179c08f6ccd62704d0"}
- experimental_model
- Pemt/Ldlr mouse knockout under a high-fat/high-cholesterol diet
- exposure
- Sixteen weeks of the specified diet; Pemt-null/Ldlr-null versus Pemt-intact/Ldlr-null
- limitations
- A lipid-export mechanism in a specific genetic model; lower plasma lipids do not establish healthier liver tissue or dietary benefit.
- nutrient_topic
- Choline research collection; topical membership is not evidence of a direct dietary effect. · Choline
- organism
- Mouse
- plain_language
- PC synthesis is connected to how the liver exports lipid.
- primary_references
- [choline-p19520976] Lack of phosphatidylethanolamine N-methyltransferase alters plasma VLDL phospholipids and attenuates atherosclerosis in mice. (2009). https://pubmed.ncbi.nlm.nih.gov/19520976/ DOI: 10.1161/atvbaha.109.188672
- tissue_or_cell_type
- Liver and circulating VLDL
Choline: metabolism, signaling and nutrient connections (2026-09-17) · lines 932–943
AI-assisted literature curation; primary study URLs and scope retained in the document and extraction. Not publisher full text. · supports · Pemt/Ldlr mouse knockout under a high-fat/high-cholesterol diet · source_derived_draft · unverified_draft
### choline-pemt-vldl Pemt deletion modestly reduced hepatic VLDL secretion in Ldlr-null mice. Condition category: normal nutrient_topic: Choline research collection; topical membership is not evidence of a direct dietary effect. plain_language: PC synthesis is connected to how the liver exports lipid. organism: Mouse tissue_or_cell_type: Liver and circulating VLDL experimental_model: Pemt/Ldlr mouse knockout under a high-fat/high-cholesterol diet limitations: A lipid-export mechanism in a specific genetic model; lower plasma lipids do not establish healthier liver tissue or dietary benefit. exposure: Sixteen weeks of the specified diet; Pemt-null/Ldlr-null versus Pemt-intact/Ldlr-null evidence_span: {"source_cache": "artifacts/choline-research/19520976.abstract.txt", "locator": "Primary indexed abstract; zero-based, end-exclusive Unicode character offsets", "file_sha256": "57c952bdb4e387632c90b6dcc00ab5f0c600047b7e78bb179c08f6ccd62704d0", "start_char": 0, "end_char": 1537, "text_sha256": "57c952bdb4e387632c90b6dcc00ab5f0c600047b7e78bb179c08f6ccd62704d0"} [choline-p19520976] Lack of phosphatidylethanolamine N-methyltransferase alters plasma VLDL phospholipids and attenuates atherosclerosis in mice. (2009). https://pubmed.ncbi.nlm.nih.gov/19520976/ DOI: 10.1161/atvbaha.109.188672
Complete structured claim and evidenceFactor Xa activated bovine prothrombin efficiently when factor Va, Ca2+ and phosphatidylserine-containing phospholipids assembled the complete prothrombinase system.
Experimental context and source evidence
- compartment_description
- Phospholipid surface
- experimental_model
- Kinetic reconstitution with defined phospholipids
- limitations
- Low residual Xa activity exists without the complete complex; this establishes biochemical assistance, not that extra dietary calcium accelerates clotting.
- nutrient_topic
- Calcium research collection; topical membership is not evidence of a direct dietary effect. · Calcium
- organism
- Bos taurus
- plain_language
- Calcium helps the membrane-associated clotting machinery generate thrombin.
- primary_references
- [rosing1980] The role of phospholipids and factor Va in the prothrombinase complex (1980). https://pubmed.ncbi.nlm.nih.gov/7350159/ DOI: 10.1016/S0021-9258(19)86294-4
- tissue_or_cell_type
- Purified blood proteins
Calcium: mechanism-first literature curation (2026-09-17) · lines 1116–1126
AI-assisted literature curation; primary study URLs and scope retained in the document and extraction. Not publisher full text. · supports · Kinetic reconstitution with defined phospholipids · source_derived_draft · unverified_draft
### calcium-phospholipid-prothrombinase Factor Xa activated bovine prothrombin efficiently when factor Va, Ca2+ and phosphatidylserine-containing phospholipids assembled the complete prothrombinase system. Condition category: normal nutrient_topic: Calcium research collection; topical membership is not evidence of a direct dietary effect. plain_language: Calcium helps the membrane-associated clotting machinery generate thrombin. organism: Bos taurus tissue_or_cell_type: Purified blood proteins experimental_model: Kinetic reconstitution with defined phospholipids limitations: Low residual Xa activity exists without the complete complex; this establishes biochemical assistance, not that extra dietary calcium accelerates clotting. compartment_description: Phospholipid surface [rosing1980] The role of phospholipids and factor Va in the prothrombinase complex (1980). https://pubmed.ncbi.nlm.nih.gov/7350159/ DOI: 10.1016/S0021-9258(19)86294-4
Complete structured claim and evidencePurified human PSS1 reconstituted with phosphatidylcholine showed serine base-exchange activity producing phosphatidylserine.
Experimental context and source evidence
- evidence_access
- Primary full text
- experimental_model
- Human PSS1 proteoliposomes with POPC and radioactive serine assays.
- limitations
- The bound endogenous lipid density could not conclusively distinguish PC from PE; no universal exclusion of PE is asserted.
- nutrient_topic
- L-Serine collection; species, compartment, exposure, co-substrates and manipulation remain explicit. · L-Serine
- plain_language
- Serine can replace a phospholipid headgroup to make a different membrane lipid.
- primary_references
- Structural basis for catalytic mechanism of human phosphatidylserine synthase 1. · 2025 · https://pubmed.ncbi.nlm.nih.gov/40044636/ · DOI 10.1038/s41421-025-00775-3
L-Serine: synthesis, one-carbon metabolism, lipids and cross-nutrient mechanisms (2026-09-19) · lines 246–252
AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Human PSS1 proteoliposomes with POPC and radioactive serine assays. · source_derived_draft · unverified_draft
## l-serine-pss1-exchange Serine can replace a phospholipid headgroup to make a different membrane lipid. Purified human PSS1 reconstituted with phosphatidylcholine showed serine base-exchange activity producing phosphatidylserine. Model: Human PSS1 proteoliposomes with POPC and radioactive serine assays. Limitations: The bound endogenous lipid density could not conclusively distinguish PC from PE; no universal exclusion of PE is asserted. Evidence access: Primary full text Structural basis for catalytic mechanism of human phosphatidylserine synthase 1. · 2025 · https://pubmed.ncbi.nlm.nih.gov/40044636/ · DOI 10.1038/s41421-025-00775-3
Complete structured claim and evidencePurified human PSS2 converted phosphatidylethanolamine, but not phosphatidylcholine, into phosphatidylserine; added phosphatidylserine inhibited purified PSS2.
Experimental context and source evidence
- evidence_access
- Primary abstract
- experimental_model
- Purified epitope-tagged human PSS1/PSS2 substrate and feedback assays.
- limitations
- In this preparation PSS1 used both PC and PE and was not inhibited by added PS; purified-enzyme feedback cannot be assumed identical across preparations or intact cells.
- nutrient_topic
- L-Serine collection; species, compartment, exposure, co-substrates and manipulation remain explicit. · L-Serine
- plain_language
- A second enzyme uses a different membrane-lipid starting material.
- primary_references
- Purification and characterization of human phosphatidylserine synthases 1 and 2. · 2009 · https://pubmed.ncbi.nlm.nih.gov/19014349/ · DOI 10.1042/BJ20081597
L-Serine: synthesis, one-carbon metabolism, lipids and cross-nutrient mechanisms (2026-09-19) · lines 414–420
AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Purified epitope-tagged human PSS1/PSS2 substrate and feedback assays. · source_derived_draft · unverified_draft
## l-serine-pss2-exchange A second enzyme uses a different membrane-lipid starting material. Purified human PSS2 converted phosphatidylethanolamine, but not phosphatidylcholine, into phosphatidylserine; added phosphatidylserine inhibited purified PSS2. Model: Purified epitope-tagged human PSS1/PSS2 substrate and feedback assays. Limitations: In this preparation PSS1 used both PC and PE and was not inhibited by added PS; purified-enzyme feedback cannot be assumed identical across preparations or intact cells. Evidence access: Primary abstract Purification and characterization of human phosphatidylserine synthases 1 and 2. · 2009 · https://pubmed.ncbi.nlm.nih.gov/19014349/ · DOI 10.1042/BJ20081597
Complete structured claim and evidenceAqueous ascorbate reduced bilayer alpha-tocopheroxyl radical back to alpha-tocopherol in oxidizing soybean phosphatidylcholine liposomes; the reported apparent bimolecular rate constant was about 2 × 10^5 M^-1 s^-1 under those conditions.
Experimental context and source evidence
- cross_nutrient
- true
- evidence_location
- Primary abstract radical accessibility and kinetic result
- experimental_model
- Soybean L-alpha-phosphatidylcholine liposomes undergoing Fe(III)-triethylenetetramine-initiated peroxidation; EPR, optical and polarographic measurements
- exposure
- Aqueous ascorbic acid described as physiological concentration in abstract (exact dose unavailable); bilayer alpha-tocopheroxyl radical detected at 10^-8–10^-7 M.
- limitations
- Membrane composition, radical initiator and assay conditions determine kinetics; no human clinical benefit or universal membrane rate is established.
- nutrient_topic
- Vitamin C research collection; topical membership is not evidence of a direct dietary effect. · Vitamin C
- organism
- Glycine max lipid preparation; cell-free
- plain_language
- Vitamin C recycled the vitamin E radical back into vitamin E across this artificial membrane-water interface.
- primary_references
- [c-reg-scarpa] Formation of alpha-tocopherol radical and recycling of alpha-tocopherol by ascorbate during peroxidation of phosphatidylcholine liposomes. An electron paramagnetic resonance study. (1984). https://pubmed.ncbi.nlm.nih.gov/6089911/ DOI: 10.1016/0304-4165(84)90070-9
- tissue_or_cell_type
- Artificial liposomes
Vitamin C: mechanisms, deficiency and nutrient interactions (2026-09-17) · lines 1201–1213
AI-assisted literature curation; primary study URLs and scope retained in the document and extraction. Not publisher full text. · supports · Soybean L-alpha-phosphatidylcholine liposomes undergoing Fe(III)-triethylenetetramine-initiated peroxidation; EPR, optical and polarographic measurements · source_derived_draft · unverified_draft
### c-reg-tocopherol-radical-recycling Aqueous ascorbate reduced bilayer alpha-tocopheroxyl radical back to alpha-tocopherol in oxidizing soybean phosphatidylcholine liposomes; the reported apparent bimolecular rate constant was about 2 × 10^5 M^-1 s^-1 under those conditions. Condition category: normal nutrient_topic: Vitamin C research collection; topical membership is not evidence of a direct dietary effect. plain_language: Vitamin C recycled the vitamin E radical back into vitamin E across this artificial membrane-water interface. organism: Glycine max lipid preparation; cell-free tissue_or_cell_type: Artificial liposomes experimental_model: Soybean L-alpha-phosphatidylcholine liposomes undergoing Fe(III)-triethylenetetramine-initiated peroxidation; EPR, optical and polarographic measurements limitations: Membrane composition, radical initiator and assay conditions determine kinetics; no human clinical benefit or universal membrane rate is established. exposure: Aqueous ascorbic acid described as physiological concentration in abstract (exact dose unavailable); bilayer alpha-tocopheroxyl radical detected at 10^-8–10^-7 M. cross_nutrient: true evidence_location: Primary abstract radical accessibility and kinetic result [c-reg-scarpa] Formation of alpha-tocopherol radical and recycling of alpha-tocopherol by ascorbate during peroxidation of phosphatidylcholine liposomes. An electron paramagnetic resonance study. (1984). https://pubmed.ncbi.nlm.nih.gov/6089911/ DOI: 10.1016/0304-4165(84)90070-9
Complete structured claim and evidenceThe GSTP1–zeaxanthin protective effect did not require glutathione in this liposome experiment.
Experimental context and source evidence
- evidence_span
- {"source_cache": "artifacts/zeaxanthin-research/15949677.abstract.txt", "locator": "Primary indexed abstract; zero-based, end-exclusive Unicode character offsets", "file_sha256": "4ed175c0b5cf937df5a37c94739b40d713261c3a99e2bebc02b3b6a37ea3f194", "start_char": 0, "end_char": 1404, "text_sha256": "4ed175c0b5cf937df5a37c94739b40d713261c3a99e2bebc02b3b6a37ea3f194"}
- experimental_model
- Lipid-peroxyl radical challenge in liposomes
- exposure
- AAPH or AMVN challenge; dietary and meso zeaxanthin
- limitations
- Protein-associated antioxidant synergy is demonstrated in this assay, not a clinical supplement combination.
- nutrient_topic
- Zeaxanthin research collection; topical membership is not evidence of a direct dietary effect. · Dietary (3R,3-prime-R)-zeaxanthin
- organism
- Cell-free system with human GSTP1
- plain_language
- This binding-related effect persisted without glutathione.
- primary_references
- [zeaxanthin-p15949677] Synergistic effects of zeaxanthin and its binding protein in the prevention of lipid membrane oxidation. (2005). https://pubmed.ncbi.nlm.nih.gov/15949677/ DOI: 10.1016/j.bbadis.2005.02.002
- tissue_or_cell_type
- Egg-yolk phosphatidylcholine liposomes
Zeaxanthin: metabolism, signaling and nutrient connections (2026-09-17) · lines 288–299
AI-assisted literature curation; primary study URLs and scope retained in the document and extraction. Not publisher full text. · supports · Lipid-peroxyl radical challenge in liposomes · source_derived_draft · unverified_draft
### zeaxanthin-gsh-independent The GSTP1–zeaxanthin protective effect did not require glutathione in this liposome experiment. Condition category: normal nutrient_topic: Zeaxanthin research collection; topical membership is not evidence of a direct dietary effect. plain_language: This binding-related effect persisted without glutathione. organism: Cell-free system with human GSTP1 tissue_or_cell_type: Egg-yolk phosphatidylcholine liposomes experimental_model: Lipid-peroxyl radical challenge in liposomes limitations: Protein-associated antioxidant synergy is demonstrated in this assay, not a clinical supplement combination. exposure: AAPH or AMVN challenge; dietary and meso zeaxanthin evidence_span: {"source_cache": "artifacts/zeaxanthin-research/15949677.abstract.txt", "locator": "Primary indexed abstract; zero-based, end-exclusive Unicode character offsets", "file_sha256": "4ed175c0b5cf937df5a37c94739b40d713261c3a99e2bebc02b3b6a37ea3f194", "start_char": 0, "end_char": 1404, "text_sha256": "4ed175c0b5cf937df5a37c94739b40d713261c3a99e2bebc02b3b6a37ea3f194"} [zeaxanthin-p15949677] Synergistic effects of zeaxanthin and its binding protein in the prevention of lipid membrane oxidation. (2005). https://pubmed.ncbi.nlm.nih.gov/15949677/ DOI: 10.1016/j.bbadis.2005.02.002
Complete structured claim and evidenceGSTP1 association increased resistance of zeaxanthin diastereomers to chemical degradation.
Experimental context and source evidence
- evidence_span
- {"source_cache": "artifacts/zeaxanthin-research/15949677.abstract.txt", "locator": "Primary indexed abstract; zero-based, end-exclusive Unicode character offsets", "file_sha256": "4ed175c0b5cf937df5a37c94739b40d713261c3a99e2bebc02b3b6a37ea3f194", "start_char": 0, "end_char": 1404, "text_sha256": "4ed175c0b5cf937df5a37c94739b40d713261c3a99e2bebc02b3b6a37ea3f194"}
- experimental_model
- Lipid-peroxyl radical challenge in liposomes
- exposure
- AAPH or AMVN challenge; dietary and meso zeaxanthin
- limitations
- Protein-associated antioxidant synergy is demonstrated in this assay, not a clinical supplement combination.
- nutrient_topic
- Zeaxanthin research collection; topical membership is not evidence of a direct dietary effect. · Dietary (3R,3-prime-R)-zeaxanthin
- organism
- Cell-free system with human GSTP1
- plain_language
- The protein helped preserve the pigments during oxidation.
- primary_references
- [zeaxanthin-p15949677] Synergistic effects of zeaxanthin and its binding protein in the prevention of lipid membrane oxidation. (2005). https://pubmed.ncbi.nlm.nih.gov/15949677/ DOI: 10.1016/j.bbadis.2005.02.002
- tissue_or_cell_type
- Egg-yolk phosphatidylcholine liposomes
Zeaxanthin: metabolism, signaling and nutrient connections (2026-09-17) · lines 275–286
AI-assisted literature curation; primary study URLs and scope retained in the document and extraction. Not publisher full text. · supports · Lipid-peroxyl radical challenge in liposomes · source_derived_draft · unverified_draft
### zeaxanthin-gstp1-stability GSTP1 association increased resistance of zeaxanthin diastereomers to chemical degradation. Condition category: normal nutrient_topic: Zeaxanthin research collection; topical membership is not evidence of a direct dietary effect. plain_language: The protein helped preserve the pigments during oxidation. organism: Cell-free system with human GSTP1 tissue_or_cell_type: Egg-yolk phosphatidylcholine liposomes experimental_model: Lipid-peroxyl radical challenge in liposomes limitations: Protein-associated antioxidant synergy is demonstrated in this assay, not a clinical supplement combination. exposure: AAPH or AMVN challenge; dietary and meso zeaxanthin evidence_span: {"source_cache": "artifacts/zeaxanthin-research/15949677.abstract.txt", "locator": "Primary indexed abstract; zero-based, end-exclusive Unicode character offsets", "file_sha256": "4ed175c0b5cf937df5a37c94739b40d713261c3a99e2bebc02b3b6a37ea3f194", "start_char": 0, "end_char": 1404, "text_sha256": "4ed175c0b5cf937df5a37c94739b40d713261c3a99e2bebc02b3b6a37ea3f194"} [zeaxanthin-p15949677] Synergistic effects of zeaxanthin and its binding protein in the prevention of lipid membrane oxidation. (2005). https://pubmed.ncbi.nlm.nih.gov/15949677/ DOI: 10.1016/j.bbadis.2005.02.002
Complete structured claim and evidenceGSTP1-bound dietary zeaxanthin synergistically inhibited peroxidation induced by either radical generator.
Experimental context and source evidence
- evidence_span
- {"source_cache": "artifacts/zeaxanthin-research/15949677.abstract.txt", "locator": "Primary indexed abstract; zero-based, end-exclusive Unicode character offsets", "file_sha256": "4ed175c0b5cf937df5a37c94739b40d713261c3a99e2bebc02b3b6a37ea3f194", "start_char": 0, "end_char": 1404, "text_sha256": "4ed175c0b5cf937df5a37c94739b40d713261c3a99e2bebc02b3b6a37ea3f194"}
- experimental_model
- Lipid-peroxyl radical challenge in liposomes
- exposure
- AAPH or AMVN challenge; dietary and meso zeaxanthin
- limitations
- Protein-associated antioxidant synergy is demonstrated in this assay, not a clinical supplement combination.
- nutrient_topic
- Zeaxanthin research collection; topical membership is not evidence of a direct dietary effect. · Dietary (3R,3-prime-R)-zeaxanthin
- organism
- Cell-free system with human GSTP1
- plain_language
- Binding enhanced protection of the test membrane.
- primary_references
- [zeaxanthin-p15949677] Synergistic effects of zeaxanthin and its binding protein in the prevention of lipid membrane oxidation. (2005). https://pubmed.ncbi.nlm.nih.gov/15949677/ DOI: 10.1016/j.bbadis.2005.02.002
- tissue_or_cell_type
- Egg-yolk phosphatidylcholine liposomes
Zeaxanthin: metabolism, signaling and nutrient connections (2026-09-17) · lines 262–273
AI-assisted literature curation; primary study URLs and scope retained in the document and extraction. Not publisher full text. · supports · Lipid-peroxyl radical challenge in liposomes · source_derived_draft · unverified_draft
### zeaxanthin-gstp1-synergy GSTP1-bound dietary zeaxanthin synergistically inhibited peroxidation induced by either radical generator. Condition category: normal nutrient_topic: Zeaxanthin research collection; topical membership is not evidence of a direct dietary effect. plain_language: Binding enhanced protection of the test membrane. organism: Cell-free system with human GSTP1 tissue_or_cell_type: Egg-yolk phosphatidylcholine liposomes experimental_model: Lipid-peroxyl radical challenge in liposomes limitations: Protein-associated antioxidant synergy is demonstrated in this assay, not a clinical supplement combination. exposure: AAPH or AMVN challenge; dietary and meso zeaxanthin evidence_span: {"source_cache": "artifacts/zeaxanthin-research/15949677.abstract.txt", "locator": "Primary indexed abstract; zero-based, end-exclusive Unicode character offsets", "file_sha256": "4ed175c0b5cf937df5a37c94739b40d713261c3a99e2bebc02b3b6a37ea3f194", "start_char": 0, "end_char": 1404, "text_sha256": "4ed175c0b5cf937df5a37c94739b40d713261c3a99e2bebc02b3b6a37ea3f194"} [zeaxanthin-p15949677] Synergistic effects of zeaxanthin and its binding protein in the prevention of lipid membrane oxidation. (2005). https://pubmed.ncbi.nlm.nih.gov/15949677/ DOI: 10.1016/j.bbadis.2005.02.002
Complete structured claim and evidenceGSTP1-bound meso-zeaxanthin was more protective than bound dietary zeaxanthin in this assay.
Experimental context and source evidence
- evidence_span
- {"source_cache": "artifacts/zeaxanthin-research/15949677.abstract.txt", "locator": "Primary indexed abstract; zero-based, end-exclusive Unicode character offsets", "file_sha256": "4ed175c0b5cf937df5a37c94739b40d713261c3a99e2bebc02b3b6a37ea3f194", "start_char": 0, "end_char": 1404, "text_sha256": "4ed175c0b5cf937df5a37c94739b40d713261c3a99e2bebc02b3b6a37ea3f194"}
- experimental_model
- Lipid-peroxyl radical challenge in liposomes
- exposure
- AAPH or AMVN challenge; dietary and meso zeaxanthin
- limitations
- Protein-associated antioxidant synergy is demonstrated in this assay, not a clinical supplement combination.
- nutrient_topic
- Zeaxanthin research collection; topical membership is not evidence of a direct dietary effect. · Dietary (3R,3-prime-R)-zeaxanthin
- organism
- Cell-free system with human GSTP1
- plain_language
- The two stereoisomers were not identical in this comparison.
- primary_references
- [zeaxanthin-p15949677] Synergistic effects of zeaxanthin and its binding protein in the prevention of lipid membrane oxidation. (2005). https://pubmed.ncbi.nlm.nih.gov/15949677/ DOI: 10.1016/j.bbadis.2005.02.002
- tissue_or_cell_type
- Egg-yolk phosphatidylcholine liposomes
Zeaxanthin: metabolism, signaling and nutrient connections (2026-09-17) · lines 301–312
AI-assisted literature curation; primary study URLs and scope retained in the document and extraction. Not publisher full text. · supports · Lipid-peroxyl radical challenge in liposomes · source_derived_draft · unverified_draft
### zeaxanthin-meso-bound-protection GSTP1-bound meso-zeaxanthin was more protective than bound dietary zeaxanthin in this assay. Condition category: normal nutrient_topic: Zeaxanthin research collection; topical membership is not evidence of a direct dietary effect. plain_language: The two stereoisomers were not identical in this comparison. organism: Cell-free system with human GSTP1 tissue_or_cell_type: Egg-yolk phosphatidylcholine liposomes experimental_model: Lipid-peroxyl radical challenge in liposomes limitations: Protein-associated antioxidant synergy is demonstrated in this assay, not a clinical supplement combination. exposure: AAPH or AMVN challenge; dietary and meso zeaxanthin evidence_span: {"source_cache": "artifacts/zeaxanthin-research/15949677.abstract.txt", "locator": "Primary indexed abstract; zero-based, end-exclusive Unicode character offsets", "file_sha256": "4ed175c0b5cf937df5a37c94739b40d713261c3a99e2bebc02b3b6a37ea3f194", "start_char": 0, "end_char": 1404, "text_sha256": "4ed175c0b5cf937df5a37c94739b40d713261c3a99e2bebc02b3b6a37ea3f194"} [zeaxanthin-p15949677] Synergistic effects of zeaxanthin and its binding protein in the prevention of lipid membrane oxidation. (2005). https://pubmed.ncbi.nlm.nih.gov/15949677/ DOI: 10.1016/j.bbadis.2005.02.002
Complete structured claim and evidenceNonpregnant MTHFR rs1801133 carriers had lower labeled betaine:phosphatidylcholine enrichment ratios than noncarriers (0.8 versus 0.9).
Experimental context and source evidence
- availability_state
- machinery_impairment Imported condition classification; unverified.
- cross_nutrient
- Folate-pathway genotype relates to choline allocation.
- experimental_model
- Choline feeding and isotope tracing in women across reproductive states.
- limitations
- Genotypes not randomized; ratio is a pathway proxy.
- nutrient_topic
- Folate and folic acid research collection; topical membership is not evidence of a direct dietary effect. · Folate (vitamin B9)
- organism
- Homo sapiens
- plain_language
- Relative choline allocation shifted toward phosphatidylcholine.
- primary_references
- [ganz-2016] Genetic impairments in folate enzymes increase dependence on dietary choline for phosphatidylcholine production at the expense of betaine synthesis (2016). https://pubmed.ncbi.nlm.nih.gov/27342765/ DOI: 10.1096/fj.201500138rr
- tissue_or_cell_type
- Plasma tracer metabolites
- trigger_kind
- machinery_impairment Imported condition classification; unverified.
Folate and folic acid: mechanisms, deficiency and nutrient interactions (2026-09-17) · lines 731–741
AI-assisted literature curation; primary study URLs and scope retained in the document and extraction. Not publisher full text. · supports · Choline feeding and isotope tracing in women across reproductive states. · source_derived_draft · unverified_draft
### folate-methyl-variant-choline-allocation Nonpregnant MTHFR rs1801133 carriers had lower labeled betaine:phosphatidylcholine enrichment ratios than noncarriers (0.8 versus 0.9). Condition category: machinery_impairment nutrient_topic: Folate and folic acid research collection; topical membership is not evidence of a direct dietary effect. plain_language: Relative choline allocation shifted toward phosphatidylcholine. organism: Homo sapiens tissue_or_cell_type: Plasma tracer metabolites experimental_model: Choline feeding and isotope tracing in women across reproductive states. limitations: Genotypes not randomized; ratio is a pathway proxy. cross_nutrient: Folate-pathway genotype relates to choline allocation. [ganz-2016] Genetic impairments in folate enzymes increase dependence on dietary choline for phosphatidylcholine production at the expense of betaine synthesis (2016). https://pubmed.ncbi.nlm.nih.gov/27342765/ DOI: 10.1096/fj.201500138rr
Complete structured claim and evidencec9,t11 increased arachidonate incorporation into phosphatidylcholine despite lower overall incorporation into membrane phospholipids.
Experimental context and source evidence
- evidence_access
- Primary abstract
- experimental_model
- Human endothelial radiotracer experiment.
- limitations
- Does not show that extra choline reproduces the effect.
- nutrient_topic
- CLA collection; isomer, preparation, species, exposure and manipulation remain explicit. · Conjugated linoleic acid / CLA isomer family
- plain_language
- A fatty acid was redistributed between membrane lipid pools.
- primary_references
- The effect of conjugated linoleic acid on arachidonic acid metabolism and eicosanoid production in human saphenous vein endothelial cells. · 2002 · https://pubmed.ncbi.nlm.nih.gov/11880240/ · DOI 10.1016/s1388-1981(01)00198-6
Conjugated linoleic acid: isomers, signaling, nutrient interactions and discovery (2026-09-19) · lines 302–308
AI-assisted research curation; primary-abstract references and experimental limitations individually identified. Not publisher full text. · supports · Human endothelial radiotracer experiment. · source_derived_draft · unverified_draft
## cla-aa-pc A fatty acid was redistributed between membrane lipid pools. c9,t11 increased arachidonate incorporation into phosphatidylcholine despite lower overall incorporation into membrane phospholipids. Model: Human endothelial radiotracer experiment. Limitations: Does not show that extra choline reproduces the effect. Evidence access: Primary abstract The effect of conjugated linoleic acid on arachidonic acid metabolism and eicosanoid production in human saphenous vein endothelial cells. · 2002 · https://pubmed.ncbi.nlm.nih.gov/11880240/ · DOI 10.1016/s1388-1981(01)00198-6
Complete structured claim and evidenceEnriched dairy increased c9,t11 CLA in plasma phosphatidylcholine, triglycerides, cholesteryl esters and peripheral blood mononuclear cells.
Experimental context and source evidence
- evidence_access
- Primary abstract
- experimental_model
- Double-blind crossover in healthy men; enriched products supplied both CLA and vaccenic acid for six weeks.
- limitations
- Cannot separate direct CLA intake from precursor conversion or infer health benefit.
- nutrient_topic
- CLA collection; isomer, preparation, species, exposure and manipulation remain explicit. · Conjugated linoleic acid / CLA isomer family
- plain_language
- CLA reached several lipid compartments.
- primary_references
- Incorporation of cis-9, trans-11 conjugated linoleic acid and vaccenic acid (trans-11 18 : 1) into plasma and leucocyte lipids in healthy men consuming dairy products naturally enriched in these fatty acids. · 2005 · https://pubmed.ncbi.nlm.nih.gov/16115358/ · DOI 10.1079/bjn20051506
Conjugated linoleic acid: isomers, signaling, nutrient interactions and discovery (2026-09-19) · lines 38–44
AI-assisted research curation; primary-abstract references and experimental limitations individually identified. Not publisher full text. · supports · Double-blind crossover in healthy men; enriched products supplied both CLA and vaccenic acid for six weeks. · source_derived_draft · unverified_draft
## cla-incorporation CLA reached several lipid compartments. Enriched dairy increased c9,t11 CLA in plasma phosphatidylcholine, triglycerides, cholesteryl esters and peripheral blood mononuclear cells. Model: Double-blind crossover in healthy men; enriched products supplied both CLA and vaccenic acid for six weeks. Limitations: Cannot separate direct CLA intake from precursor conversion or infer health benefit. Evidence access: Primary abstract Incorporation of cis-9, trans-11 conjugated linoleic acid and vaccenic acid (trans-11 18 : 1) into plasma and leucocyte lipids in healthy men consuming dairy products naturally enriched in these fatty acids. · 2005 · https://pubmed.ncbi.nlm.nih.gov/16115358/ · DOI 10.1079/bjn20051506
Complete structured claim and evidence
The events it takes part in
A mechanism often involves more than two components. These are the full events, with every participant and its role.
Situations it appears in
Low-supply and faulty-machinery situations recorded in the chapters where this component plays a part.
In the sources
Preserved passages that mention this component, quoted exactly. Open one to read it in context.
Open hypotheses
Proposed ideas that involve this component. They are labeled as hypotheses and do not change any recorded statement.
This is a research prototype built from draft material. It is not medical advice, and its statements still await verification against the original studies.