Nutrient chapter

L-Histidine

L-Histidine

80 recorded mechanisms · 11 availability situations · 8 preserved sources. Draft and verified records are labeled separately.

The mechanisms

What the sources say this nutrient does, one relationship at a time. Plain wording comes first; the technical statement follows.

  1. During histidine-deficient feeding, nitrogen balance became negative and albumin decreased in six of seven participants; repletion reversed nitrogen balance in six.

    Experimental context and source evidence
    availability_state
    nutrient_deficiency Imported condition classification; unverified.
    evidence_access
    Primary abstract
    experimental_model
    Controlled sequential metabolic-unit feeding in four healthy and three chronically uremic men; histidine-deficient amino-acid diet for 35 +/- 2 days, followed by histidine-containing diet for 31 +/- 5 days.
    limitations
    Small historical nonrandomized sequential study; mixed renal status and artificial diet. Does not define a universal plasma cutoff, ordinary dietary prevalence or replacement dose.
    nutrient_topic
    L-Histidine collection; species, compartment, exposure, co-substrates and manipulation remain explicit. · L-Histidine
    plain_language
    Without adequate histidine, the body could not maintain its previous protein balance.
    primary_references
    Evidence that histidine is an essential amino acid in normal and chronically uremic man. · 1975 · https://pubmed.ncbi.nlm.nih.gov/1123426/ · DOI 10.1172/JCI108016
    trigger_kind
    nutrient_deficiency Imported condition classification; unverified.

    L-Histidine: supply, catabolism, histamine, receptors and cross-nutrient mechanisms (2026-09-19) · lines 26–32

    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Controlled sequential metabolic-unit feeding in four healthy and three chronically uremic men; histidine-deficient amino-acid diet for 35 +/- 2 days, followed by histidine-containing diet for 31 +/- 5 days. · source_derived_draft · unverified_draft

    ## histidine-diet-nitrogen Without adequate histidine, the body could not maintain its previous protein balance. During histidine-deficient feeding, nitrogen balance became negative and albumin decreased in six of seven participants; repletion reversed nitrogen balance in six. Model: Controlled sequential metabolic-unit feeding in four healthy and three chronically uremic men; histidine-deficient amino-acid diet for 35 +/- 2 days, followed by histidine-containing diet for 31 +/- 5 days. Limitations: Small historical nonrandomized sequential study; mixed renal status and artificial diet. Does not define a universal plasma cutoff, ordinary dietary prevalence or replacement dose. Evidence access: Primary abstract Evidence that histidine is an essential amino acid in normal and chronically uremic man. · 1975 · https://pubmed.ncbi.nlm.nih.gov/1123426/ · DOI 10.1172/JCI108016
    Complete structured claim and evidence
  2. Histidine-deficient feeding reduced plasma histidine by 82 +/- 6 percent and muscle histidine by 62 +/- 19 percent; both rose with repletion.

    Experimental context and source evidence
    availability_state
    nutrient_deficiency Imported condition classification; unverified.
    evidence_access
    Primary abstract
    experimental_model
    Controlled sequential metabolic-unit feeding in four healthy and three chronically uremic men; histidine-deficient amino-acid diet for 35 +/- 2 days, followed by histidine-containing diet for 31 +/- 5 days.
    limitations
    Small historical nonrandomized sequential study; mixed renal status and artificial diet. Does not define a universal plasma cutoff, ordinary dietary prevalence or replacement dose.
    nutrient_topic
    L-Histidine collection; species, compartment, exposure, co-substrates and manipulation remain explicit. · L-Histidine
    plain_language
    Blood and muscle pools both fell, but by different amounts.
    primary_references
    Evidence that histidine is an essential amino acid in normal and chronically uremic man. · 1975 · https://pubmed.ncbi.nlm.nih.gov/1123426/ · DOI 10.1172/JCI108016
    trigger_kind
    nutrient_deficiency Imported condition classification; unverified.

    L-Histidine: supply, catabolism, histamine, receptors and cross-nutrient mechanisms (2026-09-19) · lines 34–40

    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Controlled sequential metabolic-unit feeding in four healthy and three chronically uremic men; histidine-deficient amino-acid diet for 35 +/- 2 days, followed by histidine-containing diet for 31 +/- 5 days. · source_derived_draft · unverified_draft

    ## histidine-diet-pools Blood and muscle pools both fell, but by different amounts. Histidine-deficient feeding reduced plasma histidine by 82 +/- 6 percent and muscle histidine by 62 +/- 19 percent; both rose with repletion. Model: Controlled sequential metabolic-unit feeding in four healthy and three chronically uremic men; histidine-deficient amino-acid diet for 35 +/- 2 days, followed by histidine-containing diet for 31 +/- 5 days. Limitations: Small historical nonrandomized sequential study; mixed renal status and artificial diet. Does not define a universal plasma cutoff, ordinary dietary prevalence or replacement dose. Evidence access: Primary abstract Evidence that histidine is an essential amino acid in normal and chronically uremic man. · 1975 · https://pubmed.ncbi.nlm.nih.gov/1123426/ · DOI 10.1172/JCI108016
    Complete structured claim and evidence
  3. Histidine-deficient feeding lowered hematocrit by 25 +/- 9 percent while serum iron rose; repletion produced reticulocytosis, higher hematocrit and a fall in serum iron.

    Experimental context and source evidence
    availability_state
    nutrient_deficiency Imported condition classification; unverified.
    evidence_access
    Primary abstract
    experimental_model
    Controlled sequential metabolic-unit feeding in four healthy and three chronically uremic men; histidine-deficient amino-acid diet for 35 +/- 2 days, followed by histidine-containing diet for 31 +/- 5 days.
    limitations
    Small historical nonrandomized sequential study; mixed renal status and artificial diet. Does not define a universal plasma cutoff, ordinary dietary prevalence or replacement dose. Changes do not identify the exact iron-handling mechanism.
    nutrient_topic
    L-Histidine collection; species, compartment, exposure, co-substrates and manipulation remain explicit. · L-Histidine
    plain_language
    Red-cell production failed despite more iron in serum.
    primary_references
    Evidence that histidine is an essential amino acid in normal and chronically uremic man. · 1975 · https://pubmed.ncbi.nlm.nih.gov/1123426/ · DOI 10.1172/JCI108016
    trigger_kind
    nutrient_deficiency Imported condition classification; unverified.

    L-Histidine: supply, catabolism, histamine, receptors and cross-nutrient mechanisms (2026-09-19) · lines 42–48

    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Controlled sequential metabolic-unit feeding in four healthy and three chronically uremic men; histidine-deficient amino-acid diet for 35 +/- 2 days, followed by histidine-containing diet for 31 +/- 5 days. · source_derived_draft · unverified_draft

    ## histidine-diet-erythropoiesis Red-cell production failed despite more iron in serum. Histidine-deficient feeding lowered hematocrit by 25 +/- 9 percent while serum iron rose; repletion produced reticulocytosis, higher hematocrit and a fall in serum iron. Model: Controlled sequential metabolic-unit feeding in four healthy and three chronically uremic men; histidine-deficient amino-acid diet for 35 +/- 2 days, followed by histidine-containing diet for 31 +/- 5 days. Limitations: Small historical nonrandomized sequential study; mixed renal status and artificial diet. Does not define a universal plasma cutoff, ordinary dietary prevalence or replacement dose. Changes do not identify the exact iron-handling mechanism. Evidence access: Primary abstract Evidence that histidine is an essential amino acid in normal and chronically uremic man. · 1975 · https://pubmed.ncbi.nlm.nih.gov/1123426/ · DOI 10.1172/JCI108016
    Complete structured claim and evidence
  4. Five participants developed scaling, dryness and mild erythema during histidine-deficient feeding; these lesions and general symptoms resolved after repletion.

    Experimental context and source evidence
    availability_state
    nutrient_deficiency Imported condition classification; unverified.
    evidence_access
    Primary abstract
    experimental_model
    Controlled sequential metabolic-unit feeding in four healthy and three chronically uremic men; histidine-deficient amino-acid diet for 35 +/- 2 days, followed by histidine-containing diet for 31 +/- 5 days.
    limitations
    Small historical nonrandomized sequential study; mixed renal status and artificial diet. Does not define a universal plasma cutoff, ordinary dietary prevalence or replacement dose.
    nutrient_topic
    L-Histidine collection; species, compartment, exposure, co-substrates and manipulation remain explicit. · L-Histidine
    plain_language
    The controlled shortage also affected skin.
    primary_references
    Evidence that histidine is an essential amino acid in normal and chronically uremic man. · 1975 · https://pubmed.ncbi.nlm.nih.gov/1123426/ · DOI 10.1172/JCI108016
    trigger_kind
    nutrient_deficiency Imported condition classification; unverified.

    L-Histidine: supply, catabolism, histamine, receptors and cross-nutrient mechanisms (2026-09-19) · lines 50–56

    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Controlled sequential metabolic-unit feeding in four healthy and three chronically uremic men; histidine-deficient amino-acid diet for 35 +/- 2 days, followed by histidine-containing diet for 31 +/- 5 days. · source_derived_draft · unverified_draft

    ## histidine-diet-skin The controlled shortage also affected skin. Five participants developed scaling, dryness and mild erythema during histidine-deficient feeding; these lesions and general symptoms resolved after repletion. Model: Controlled sequential metabolic-unit feeding in four healthy and three chronically uremic men; histidine-deficient amino-acid diet for 35 +/- 2 days, followed by histidine-containing diet for 31 +/- 5 days. Limitations: Small historical nonrandomized sequential study; mixed renal status and artificial diet. Does not define a universal plasma cutoff, ordinary dietary prevalence or replacement dose. Evidence access: Primary abstract Evidence that histidine is an essential amino acid in normal and chronically uremic man. · 1975 · https://pubmed.ncbi.nlm.nih.gov/1123426/ · DOI 10.1172/JCI108016
    Complete structured claim and evidence
  5. Reconstituted human LAT1 supported histidine antiport, including exchange with internal cysteine, tyrosine or glutamine; external histidine affinity exceeded internal affinity.

    Experimental context and source evidence
    evidence_access
    Primary abstract
    experimental_model
    Human SiHa extracts and purified recombinant human LAT1 in proteoliposomes.
    limitations
    In-vitro exchange does not establish whole-body competition or supplement ratios.
    nutrient_topic
    L-Histidine collection; species, compartment, exposure, co-substrates and manipulation remain explicit. · L-Histidine
    plain_language
    The transporter exchanges substrates, so both sides of the membrane matter.
    primary_references
    LAT1 is the transport competent unit of the LAT1/CD98 heterodimeric amino acid transporter. · 2015 · https://pubmed.ncbi.nlm.nih.gov/26256001/ · DOI 10.1016/j.biocel.2015.08.004
    transport_effect
    depends Recorded as antiport, including exchange with internal cysteine, tyrosine or glutamine.
    transport_pool
    the cytosol across the plasma membrane Recorded as antiport, including exchange with internal cysteine, tyrosine or glutamine.

    L-Histidine: supply, catabolism, histamine, receptors and cross-nutrient mechanisms (2026-09-19) · lines 58–64

    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Human SiHa extracts and purified recombinant human LAT1 in proteoliposomes. · source_derived_draft · unverified_draft

    ## histidine-lat1-exchange The transporter exchanges substrates, so both sides of the membrane matter. Reconstituted human LAT1 supported histidine antiport, including exchange with internal cysteine, tyrosine or glutamine; external histidine affinity exceeded internal affinity. Model: Human SiHa extracts and purified recombinant human LAT1 in proteoliposomes. Limitations: In-vitro exchange does not establish whole-body competition or supplement ratios. Evidence access: Primary abstract LAT1 is the transport competent unit of the LAT1/CD98 heterodimeric amino acid transporter. · 2015 · https://pubmed.ncbi.nlm.nih.gov/26256001/ · DOI 10.1016/j.biocel.2015.08.004
    Complete structured claim and evidence
  6. Purified human LAT1 alone transported histidine in proteoliposomes; purified CD98 alone did not.

    Experimental context and source evidence
    evidence_access
    Primary abstract
    experimental_model
    Recombinant human LAT1 and CD98 reconstitution.
    limitations
    CD98 dispensability for this assay does not mean dispensability for membrane targeting in intact tissues.
    nutrient_topic
    L-Histidine collection; species, compartment, exposure, co-substrates and manipulation remain explicit. · L-Histidine
    plain_language
    The transport pore and its partnering protein have distinct roles.
    primary_references
    LAT1 is the transport competent unit of the LAT1/CD98 heterodimeric amino acid transporter. · 2015 · https://pubmed.ncbi.nlm.nih.gov/26256001/ · DOI 10.1016/j.biocel.2015.08.004

    L-Histidine: supply, catabolism, histamine, receptors and cross-nutrient mechanisms (2026-09-19) · lines 66–72

    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Recombinant human LAT1 and CD98 reconstitution. · source_derived_draft · unverified_draft

    ## histidine-lat1-subunit The transport pore and its partnering protein have distinct roles. Purified human LAT1 alone transported histidine in proteoliposomes; purified CD98 alone did not. Model: Recombinant human LAT1 and CD98 reconstitution. Limitations: CD98 dispensability for this assay does not mean dispensability for membrane targeting in intact tissues. Evidence access: Primary abstract LAT1 is the transport competent unit of the LAT1/CD98 heterodimeric amino acid transporter. · 2015 · https://pubmed.ncbi.nlm.nih.gov/26256001/ · DOI 10.1016/j.biocel.2015.08.004
    Complete structured claim and evidence
  7. Expressed human SN2 transported histidine with sodium dependence and strong pH sensitivity; the measured histidine Km was 0.6 +/- 0.1 mM.

    Human system N transporter SN2 / SLC38A5 → L-Histidine source_derived_draftungraded
    Experimental context and source evidence
    evidence_access
    Primary abstract
    experimental_model
    Cloned human liver-cell SN2 in mammalian expression assays.
    limitations
    Transporter kinetics do not supply a dietary sodium or histidine target.
    nutrient_topic
    L-Histidine collection; species, compartment, exposure, co-substrates and manipulation remain explicit. · L-Histidine
    plain_language
    A second uptake system depends on the ionic and pH environment.
    primary_references
    Structure, function, and tissue expression pattern of human SN2, a subtype of the amino acid transport system N. · 2001 · https://pubmed.ncbi.nlm.nih.gov/11243884/ · DOI 10.1006/bbrc.2001.4504
    transport_effect
    raises Sodium-dependent histidine transport with a measured Km of 0.6 mM.
    transport_pool
    the expressing cell Sodium-dependent histidine transport with a measured Km of 0.6 mM.

    L-Histidine: supply, catabolism, histamine, receptors and cross-nutrient mechanisms (2026-09-19) · lines 74–80

    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Cloned human liver-cell SN2 in mammalian expression assays. · source_derived_draft · unverified_draft

    ## histidine-sn2-uptake A second uptake system depends on the ionic and pH environment. Expressed human SN2 transported histidine with sodium dependence and strong pH sensitivity; the measured histidine Km was 0.6 +/- 0.1 mM. Model: Cloned human liver-cell SN2 in mammalian expression assays. Limitations: Transporter kinetics do not supply a dietary sodium or histidine target. Evidence access: Primary abstract Structure, function, and tissue expression pattern of human SN2, a subtype of the amino acid transport system N. · 2001 · https://pubmed.ncbi.nlm.nih.gov/11243884/ · DOI 10.1006/bbrc.2001.4504
    Complete structured claim and evidence
  8. Purified human LAT1 transported Cu(His)2 without the internal counter-substrate required for ordinary amino-acid antiport.

    Experimental context and source evidence
    evidence_access
    Primary full text
    experimental_model
    Reconstituted human LAT1; radiotracer uptake, copper mass spectrometry and mutagenesis; representative assay 40 micromolar histidine plus 20 micromolar copper sulfate.
    limitations
    This in-vitro uniport finding does not establish human copper delivery, safety or treatment efficacy.
    nutrient_topic
    L-Histidine collection; species, compartment, exposure, co-substrates and manipulation remain explicit. · L-Histidine
    plain_language
    Binding copper changed how the histidine-containing species crossed this transporter.
    primary_references
    LAT1 (SLC7A5) catalyzes copper(histidinate) transport switching from antiport to uniport mechanism. · 2023 · https://pubmed.ncbi.nlm.nih.gov/37692288/ · DOI 10.1016/j.isci.2023.107738
    transport_effect
    raises Transported without the internal counter-substrate ordinary antiport needs, so this record is a uniport measurement.
    transport_pool
    the proteoliposome interior Transported without the internal counter-substrate ordinary antiport needs, so this record is a uniport measurement.

    L-Histidine: supply, catabolism, histamine, receptors and cross-nutrient mechanisms (2026-09-19) · lines 82–88

    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Reconstituted human LAT1; radiotracer uptake, copper mass spectrometry and mutagenesis; representative assay 40 micromolar histidine plus 20 micromolar copper sulfate. · source_derived_draft · unverified_draft

    ## histidine-lat1-copper-complex Binding copper changed how the histidine-containing species crossed this transporter. Purified human LAT1 transported Cu(His)2 without the internal counter-substrate required for ordinary amino-acid antiport. Model: Reconstituted human LAT1; radiotracer uptake, copper mass spectrometry and mutagenesis; representative assay 40 micromolar histidine plus 20 micromolar copper sulfate. Limitations: This in-vitro uniport finding does not establish human copper delivery, safety or treatment efficacy. Evidence access: Primary full text LAT1 (SLC7A5) catalyzes copper(histidinate) transport switching from antiport to uniport mechanism. · 2023 · https://pubmed.ncbi.nlm.nih.gov/37692288/ · DOI 10.1016/j.isci.2023.107738
    Complete structured claim and evidence
  9. Deleting Pht1 reduced histidine uptake in mouse brain slices by about half; Pept2 expression increased approximately twofold.

    Experimental context and source evidence
    availability_state
    machinery_impairment Imported condition classification; unverified.
    evidence_access
    Primary full text
    experimental_model
    Pht1-null and matched wild-type adult mice; brain slices and transporter expression.
    limitations
    Genetic deletion is not dietary histidine deficiency.
    nutrient_topic
    L-Histidine collection; species, compartment, exposure, co-substrates and manipulation remain explicit. · L-Histidine
    plain_language
    Loss of one transporter altered uptake even with a compensatory response.
    primary_references
    A novel role for PHT1 in the disposition of l-histidine in brain: In vitro slice and in vivo pharmacokinetic studies in wildtype and Pht1 null mice. · 2017 · https://pubmed.ncbi.nlm.nih.gov/27845049/ · DOI 10.1016/j.bcp.2016.11.012
    trigger_kind
    machinery_impairment Imported condition classification; unverified.

    L-Histidine: supply, catabolism, histamine, receptors and cross-nutrient mechanisms (2026-09-19) · lines 90–96

    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Pht1-null and matched wild-type adult mice; brain slices and transporter expression. · source_derived_draft · unverified_draft

    ## histidine-pht1-brain-uptake Loss of one transporter altered uptake even with a compensatory response. Deleting Pht1 reduced histidine uptake in mouse brain slices by about half; Pept2 expression increased approximately twofold. Model: Pht1-null and matched wild-type adult mice; brain slices and transporter expression. Limitations: Genetic deletion is not dietary histidine deficiency. Evidence access: Primary full text A novel role for PHT1 in the disposition of l-histidine in brain: In vitro slice and in vivo pharmacokinetic studies in wildtype and Pht1 null mice. · 2017 · https://pubmed.ncbi.nlm.nih.gov/27845049/ · DOI 10.1016/j.bcp.2016.11.012
    Complete structured claim and evidence
  10. Five minutes after intravenous histidine, Pht1-null mouse brain parenchyma contained 28-48 percent less tracer-associated histidine than wild type, despite comparable plasma time courses and no corresponding CSF difference.

    Experimental context and source evidence
    availability_state
    machinery_impairment Imported condition classification; unverified.
    evidence_access
    Primary full text
    experimental_model
    Mouse knockout and intravenous pharmacokinetics.
    limitations
    Acute tracer distribution cannot define steady-state human brain deficiency.
    nutrient_topic
    L-Histidine collection; species, compartment, exposure, co-substrates and manipulation remain explicit. · L-Histidine
    plain_language
    A normal circulating profile did not guarantee the same tissue exposure.
    primary_references
    A novel role for PHT1 in the disposition of l-histidine in brain: In vitro slice and in vivo pharmacokinetic studies in wildtype and Pht1 null mice. · 2017 · https://pubmed.ncbi.nlm.nih.gov/27845049/ · DOI 10.1016/j.bcp.2016.11.012
    trigger_kind
    machinery_impairment Imported condition classification; unverified.

    L-Histidine: supply, catabolism, histamine, receptors and cross-nutrient mechanisms (2026-09-19) · lines 98–104

    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Mouse knockout and intravenous pharmacokinetics. · source_derived_draft · unverified_draft

    ## histidine-pht1-compartments A normal circulating profile did not guarantee the same tissue exposure. Five minutes after intravenous histidine, Pht1-null mouse brain parenchyma contained 28-48 percent less tracer-associated histidine than wild type, despite comparable plasma time courses and no corresponding CSF difference. Model: Mouse knockout and intravenous pharmacokinetics. Limitations: Acute tracer distribution cannot define steady-state human brain deficiency. Evidence access: Primary full text A novel role for PHT1 in the disposition of l-histidine in brain: In vitro slice and in vivo pharmacokinetic studies in wildtype and Pht1 null mice. · 2017 · https://pubmed.ncbi.nlm.nih.gov/27845049/ · DOI 10.1016/j.bcp.2016.11.012
    Complete structured claim and evidence
  11. HAL initiates histidine degradation by converting L-histidine to trans-urocanate with ammonia release.

    Human histidine ammonia-lyase / HAL → trans-Urocanate source_derived_draftungraded
    Experimental context and source evidence
    evidence_access
    Primary full text; pathway background
    experimental_model
    Established reaction in the pathway map of a primary human cancer-cell study; genetic perturbation and metabolomics investigate pathway flux rather than purified kinetics of every individual enzyme.
    limitations
    Reaction background is distinguished from the study-specific CRISPR findings below. Correction record: A 2022 author correction is indexed (PMID 35017686). The publisher-accessible record identifies corrected Fig. 1f, Extended Data Fig. 11, Supplementary Fig. 3 and source data for Figs. 1/2, including an erroneous doxorubicin replicate. Complete correction narrative was not accessible; its full impact is not independently cleared. The original study remains flagged corrected, and no comprehensive safety claim is made. https://www.nature.com/articles/s41586-021-03487-2
    nutrient_topic
    L-Histidine collection; species, compartment, exposure, co-substrates and manipulation remain explicit. · L-Histidine
    plain_language
    The first breakdown enzyme directs histidine toward urocanate.
    primary_references
    Histidine catabolism is a major determinant of methotrexate sensitivity. · 2018 · https://pubmed.ncbi.nlm.nih.gov/29995852/ · DOI 10.1038/s41586-018-0316-7

    L-Histidine: supply, catabolism, histamine, receptors and cross-nutrient mechanisms (2026-09-19) · lines 106–112

    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Established reaction in the pathway map of a primary human cancer-cell study; genetic perturbation and metabolomics investigate pathway flux rather than purified kinetics of every individual enzyme. · source_derived_draft · unverified_draft

    ## histidine-hal-reaction The first breakdown enzyme directs histidine toward urocanate. HAL initiates histidine degradation by converting L-histidine to trans-urocanate with ammonia release. Model: Established reaction in the pathway map of a primary human cancer-cell study; genetic perturbation and metabolomics investigate pathway flux rather than purified kinetics of every individual enzyme. Limitations: Reaction background is distinguished from the study-specific CRISPR findings below. Correction record: A 2022 author correction is indexed (PMID 35017686). The publisher-accessible record identifies corrected Fig. 1f, Extended Data Fig. 11, Supplementary Fig. 3 and source data for Figs. 1/2, including an erroneous doxorubicin replicate. Complete correction narrative was not accessible; its full impact is not independently cleared. The original study remains flagged corrected, and no comprehensive safety claim is made. https://www.nature.com/articles/s41586-021-03487-2 Evidence access: Primary full text; pathway background Histidine catabolism is a major determinant of methotrexate sensitivity. · 2018 · https://pubmed.ncbi.nlm.nih.gov/29995852/ · DOI 10.1038/s41586-018-0316-7
    Complete structured claim and evidence
  12. UROC1 hydrates urocanate to imidazolonepropionate in the histidine degradation pathway.

    Experimental context and source evidence
    evidence_access
    Primary full text; pathway background
    experimental_model
    Established reaction in the pathway map of a primary human cancer-cell study; genetic perturbation and metabolomics investigate pathway flux rather than purified kinetics of every individual enzyme.
    limitations
    Not a claim that added histidine can bypass UROC1 loss. Correction record: A 2022 author correction is indexed (PMID 35017686). The publisher-accessible record identifies corrected Fig. 1f, Extended Data Fig. 11, Supplementary Fig. 3 and source data for Figs. 1/2, including an erroneous doxorubicin replicate. Complete correction narrative was not accessible; its full impact is not independently cleared. The original study remains flagged corrected, and no comprehensive safety claim is made. https://www.nature.com/articles/s41586-021-03487-2
    nutrient_topic
    L-Histidine collection; species, compartment, exposure, co-substrates and manipulation remain explicit. · L-Histidine
    plain_language
    A second enzyme changes urocanate into the next intermediate.
    primary_references
    Histidine catabolism is a major determinant of methotrexate sensitivity. · 2018 · https://pubmed.ncbi.nlm.nih.gov/29995852/ · DOI 10.1038/s41586-018-0316-7

    L-Histidine: supply, catabolism, histamine, receptors and cross-nutrient mechanisms (2026-09-19) · lines 114–120

    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Established reaction in the pathway map of a primary human cancer-cell study; genetic perturbation and metabolomics investigate pathway flux rather than purified kinetics of every individual enzyme. · source_derived_draft · unverified_draft

    ## histidine-uroc-reaction A second enzyme changes urocanate into the next intermediate. UROC1 hydrates urocanate to imidazolonepropionate in the histidine degradation pathway. Model: Established reaction in the pathway map of a primary human cancer-cell study; genetic perturbation and metabolomics investigate pathway flux rather than purified kinetics of every individual enzyme. Limitations: Not a claim that added histidine can bypass UROC1 loss. Correction record: A 2022 author correction is indexed (PMID 35017686). The publisher-accessible record identifies corrected Fig. 1f, Extended Data Fig. 11, Supplementary Fig. 3 and source data for Figs. 1/2, including an erroneous doxorubicin replicate. Complete correction narrative was not accessible; its full impact is not independently cleared. The original study remains flagged corrected, and no comprehensive safety claim is made. https://www.nature.com/articles/s41586-021-03487-2 Evidence access: Primary full text; pathway background Histidine catabolism is a major determinant of methotrexate sensitivity. · 2018 · https://pubmed.ncbi.nlm.nih.gov/29995852/ · DOI 10.1038/s41586-018-0316-7
    Complete structured claim and evidence
  13. AMDHD1 hydrolyzes imidazolonepropionate to formiminoglutamate in the histidine degradation pathway.

    Experimental context and source evidence
    evidence_access
    Primary full text; pathway background
    experimental_model
    Established reaction in the pathway map of a primary human cancer-cell study; genetic perturbation and metabolomics investigate pathway flux rather than purified kinetics of every individual enzyme.
    limitations
    Not interchangeable with bacterial imidazole-propionate synthesis. Correction record: A 2022 author correction is indexed (PMID 35017686). The publisher-accessible record identifies corrected Fig. 1f, Extended Data Fig. 11, Supplementary Fig. 3 and source data for Figs. 1/2, including an erroneous doxorubicin replicate. Complete correction narrative was not accessible; its full impact is not independently cleared. The original study remains flagged corrected, and no comprehensive safety claim is made. https://www.nature.com/articles/s41586-021-03487-2
    nutrient_topic
    L-Histidine collection; species, compartment, exposure, co-substrates and manipulation remain explicit. · L-Histidine
    plain_language
    This step creates FIGLU, the intermediate that links to folate.
    primary_references
    Histidine catabolism is a major determinant of methotrexate sensitivity. · 2018 · https://pubmed.ncbi.nlm.nih.gov/29995852/ · DOI 10.1038/s41586-018-0316-7

    L-Histidine: supply, catabolism, histamine, receptors and cross-nutrient mechanisms (2026-09-19) · lines 122–128

    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Established reaction in the pathway map of a primary human cancer-cell study; genetic perturbation and metabolomics investigate pathway flux rather than purified kinetics of every individual enzyme. · source_derived_draft · unverified_draft

    ## histidine-amdhd-reaction This step creates FIGLU, the intermediate that links to folate. AMDHD1 hydrolyzes imidazolonepropionate to formiminoglutamate in the histidine degradation pathway. Model: Established reaction in the pathway map of a primary human cancer-cell study; genetic perturbation and metabolomics investigate pathway flux rather than purified kinetics of every individual enzyme. Limitations: Not interchangeable with bacterial imidazole-propionate synthesis. Correction record: A 2022 author correction is indexed (PMID 35017686). The publisher-accessible record identifies corrected Fig. 1f, Extended Data Fig. 11, Supplementary Fig. 3 and source data for Figs. 1/2, including an erroneous doxorubicin replicate. Complete correction narrative was not accessible; its full impact is not independently cleared. The original study remains flagged corrected, and no comprehensive safety claim is made. https://www.nature.com/articles/s41586-021-03487-2 Evidence access: Primary full text; pathway background Histidine catabolism is a major determinant of methotrexate sensitivity. · 2018 · https://pubmed.ncbi.nlm.nih.gov/29995852/ · DOI 10.1038/s41586-018-0316-7
    Complete structured claim and evidence
  14. The formiminotransferase domain of FTCD transfers the formimino group from FIGLU to THF, producing 5-formimino-THF and glutamate.

    Experimental context and source evidence
    evidence_access
    Primary full text
    experimental_model
    Established reaction in the pathway map of a primary human cancer-cell study; genetic perturbation and metabolomics investigate pathway flux rather than purified kinetics of every individual enzyme.
    limitations
    The existing rat FTCD biochemical claim remains a separate species-specific record. Correction record: A 2022 author correction is indexed (PMID 35017686). The publisher-accessible record identifies corrected Fig. 1f, Extended Data Fig. 11, Supplementary Fig. 3 and source data for Figs. 1/2, including an erroneous doxorubicin replicate. Complete correction narrative was not accessible; its full impact is not independently cleared. The original study remains flagged corrected, and no comprehensive safety claim is made. https://www.nature.com/articles/s41586-021-03487-2
    nutrient_topic
    L-Histidine collection; species, compartment, exposure, co-substrates and manipulation remain explicit. · L-Histidine
    plain_language
    Folate accepts a group from a histidine-derived intermediate.
    primary_references
    Histidine catabolism is a major determinant of methotrexate sensitivity. · 2018 · https://pubmed.ncbi.nlm.nih.gov/29995852/ · DOI 10.1038/s41586-018-0316-7

    L-Histidine: supply, catabolism, histamine, receptors and cross-nutrient mechanisms (2026-09-19) · lines 130–136

    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Established reaction in the pathway map of a primary human cancer-cell study; genetic perturbation and metabolomics investigate pathway flux rather than purified kinetics of every individual enzyme. · source_derived_draft · unverified_draft

    ## histidine-ftcd-transfer Folate accepts a group from a histidine-derived intermediate. The formiminotransferase domain of FTCD transfers the formimino group from FIGLU to THF, producing 5-formimino-THF and glutamate. Model: Established reaction in the pathway map of a primary human cancer-cell study; genetic perturbation and metabolomics investigate pathway flux rather than purified kinetics of every individual enzyme. Limitations: The existing rat FTCD biochemical claim remains a separate species-specific record. Correction record: A 2022 author correction is indexed (PMID 35017686). The publisher-accessible record identifies corrected Fig. 1f, Extended Data Fig. 11, Supplementary Fig. 3 and source data for Figs. 1/2, including an erroneous doxorubicin replicate. Complete correction narrative was not accessible; its full impact is not independently cleared. The original study remains flagged corrected, and no comprehensive safety claim is made. https://www.nature.com/articles/s41586-021-03487-2 Evidence access: Primary full text Histidine catabolism is a major determinant of methotrexate sensitivity. · 2018 · https://pubmed.ncbi.nlm.nih.gov/29995852/ · DOI 10.1038/s41586-018-0316-7
    Complete structured claim and evidence
  15. The cyclodeaminase domain of FTCD converts 5-formimino-THF to 5,10-methenyl-THF.

    Experimental context and source evidence
    evidence_access
    Primary full text
    experimental_model
    Established reaction in the pathway map of a primary human cancer-cell study; genetic perturbation and metabolomics investigate pathway flux rather than purified kinetics of every individual enzyme.
    limitations
    Two catalytic activities are separately searchable; this does not establish folate depletion in a normally nourished person. Correction record: A 2022 author correction is indexed (PMID 35017686). The publisher-accessible record identifies corrected Fig. 1f, Extended Data Fig. 11, Supplementary Fig. 3 and source data for Figs. 1/2, including an erroneous doxorubicin replicate. Complete correction narrative was not accessible; its full impact is not independently cleared. The original study remains flagged corrected, and no comprehensive safety claim is made. https://www.nature.com/articles/s41586-021-03487-2
    nutrient_topic
    L-Histidine collection; species, compartment, exposure, co-substrates and manipulation remain explicit. · L-Histidine
    plain_language
    A second activity of the same enzyme hands the group into one-carbon metabolism.
    primary_references
    Histidine catabolism is a major determinant of methotrexate sensitivity. · 2018 · https://pubmed.ncbi.nlm.nih.gov/29995852/ · DOI 10.1038/s41586-018-0316-7

    L-Histidine: supply, catabolism, histamine, receptors and cross-nutrient mechanisms (2026-09-19) · lines 138–144

    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Established reaction in the pathway map of a primary human cancer-cell study; genetic perturbation and metabolomics investigate pathway flux rather than purified kinetics of every individual enzyme. · source_derived_draft · unverified_draft

    ## histidine-ftcd-cyclodeamination A second activity of the same enzyme hands the group into one-carbon metabolism. The cyclodeaminase domain of FTCD converts 5-formimino-THF to 5,10-methenyl-THF. Model: Established reaction in the pathway map of a primary human cancer-cell study; genetic perturbation and metabolomics investigate pathway flux rather than purified kinetics of every individual enzyme. Limitations: Two catalytic activities are separately searchable; this does not establish folate depletion in a normally nourished person. Correction record: A 2022 author correction is indexed (PMID 35017686). The publisher-accessible record identifies corrected Fig. 1f, Extended Data Fig. 11, Supplementary Fig. 3 and source data for Figs. 1/2, including an erroneous doxorubicin replicate. Complete correction narrative was not accessible; its full impact is not independently cleared. The original study remains flagged corrected, and no comprehensive safety claim is made. https://www.nature.com/articles/s41586-021-03487-2 Evidence access: Primary full text Histidine catabolism is a major determinant of methotrexate sensitivity. · 2018 · https://pubmed.ncbi.nlm.nih.gov/29995852/ · DOI 10.1038/s41586-018-0316-7
    Complete structured claim and evidence
  16. CRISPR depletion of FTCD reduced methotrexate sensitivity in HEL, Ramos and LAMA84 cells; an sgRNA-resistant murine Ftcd construct restored sensitivity in the rescue experiment.

    Experimental context and source evidence
    availability_state
    machinery_impairment Imported condition classification; unverified.
    evidence_access
    Primary full text
    experimental_model
    Human cancer lines, CRISPR/RNAi and mouse-cDNA rescue.
    limitations
    Drug-exposed culture and cross-species rescue; not evidence that histidine is universally harmful or beneficial. Correction record: A 2022 author correction is indexed (PMID 35017686). The publisher-accessible record identifies corrected Fig. 1f, Extended Data Fig. 11, Supplementary Fig. 3 and source data for Figs. 1/2, including an erroneous doxorubicin replicate. Complete correction narrative was not accessible; its full impact is not independently cleared. The original study remains flagged corrected, and no comprehensive safety claim is made. https://www.nature.com/articles/s41586-021-03487-2
    nutrient_topic
    L-Histidine collection; species, compartment, exposure, co-substrates and manipulation remain explicit. · L-Histidine
    plain_language
    Removing this histidine-processing step made the tested cancer cells less sensitive to the drug.
    primary_references
    Histidine catabolism is a major determinant of methotrexate sensitivity. · 2018 · https://pubmed.ncbi.nlm.nih.gov/29995852/ · DOI 10.1038/s41586-018-0316-7
    trigger_kind
    machinery_impairment Imported condition classification; unverified.

    L-Histidine: supply, catabolism, histamine, receptors and cross-nutrient mechanisms (2026-09-19) · lines 146–152

    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Human cancer lines, CRISPR/RNAi and mouse-cDNA rescue. · source_derived_draft · unverified_draft

    ## histidine-ftcd-loss-mtx Removing this histidine-processing step made the tested cancer cells less sensitive to the drug. CRISPR depletion of FTCD reduced methotrexate sensitivity in HEL, Ramos and LAMA84 cells; an sgRNA-resistant murine Ftcd construct restored sensitivity in the rescue experiment. Model: Human cancer lines, CRISPR/RNAi and mouse-cDNA rescue. Limitations: Drug-exposed culture and cross-species rescue; not evidence that histidine is universally harmful or beneficial. Correction record: A 2022 author correction is indexed (PMID 35017686). The publisher-accessible record identifies corrected Fig. 1f, Extended Data Fig. 11, Supplementary Fig. 3 and source data for Figs. 1/2, including an erroneous doxorubicin replicate. Complete correction narrative was not accessible; its full impact is not independently cleared. The original study remains flagged corrected, and no comprehensive safety claim is made. https://www.nature.com/articles/s41586-021-03487-2 Evidence access: Primary full text Histidine catabolism is a major determinant of methotrexate sensitivity. · 2018 · https://pubmed.ncbi.nlm.nih.gov/29995852/ · DOI 10.1038/s41586-018-0316-7
    Complete structured claim and evidence
  17. Under methotrexate, FTCD depletion preserved THF and increased serine-derived labeling of IMP and TTP relative to controls.

    Experimental context and source evidence
    availability_state
    machinery_impairment Imported condition classification; unverified.
    evidence_access
    Primary full text
    experimental_model
    Human cancer cells with FTCD depletion, metabolomics and U-13C-serine tracing.
    limitations
    Measured under methotrexate; do not generalize to normal folate demand or all tissues. Correction record: A 2022 author correction is indexed (PMID 35017686). The publisher-accessible record identifies corrected Fig. 1f, Extended Data Fig. 11, Supplementary Fig. 3 and source data for Figs. 1/2, including an erroneous doxorubicin replicate. Complete correction narrative was not accessible; its full impact is not independently cleared. The original study remains flagged corrected, and no comprehensive safety claim is made. https://www.nature.com/articles/s41586-021-03487-2
    nutrient_topic
    L-Histidine collection; species, compartment, exposure, co-substrates and manipulation remain explicit. · L-Histidine
    plain_language
    Blocking histidine breakdown spared folate for nucleotide production in this drug-stressed setting.
    primary_references
    Histidine catabolism is a major determinant of methotrexate sensitivity. · 2018 · https://pubmed.ncbi.nlm.nih.gov/29995852/ · DOI 10.1038/s41586-018-0316-7
    trigger_kind
    machinery_impairment Imported condition classification; unverified.

    L-Histidine: supply, catabolism, histamine, receptors and cross-nutrient mechanisms (2026-09-19) · lines 154–160

    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Human cancer cells with FTCD depletion, metabolomics and U-13C-serine tracing. · source_derived_draft · unverified_draft

    ## histidine-ftcd-thf-sparing Blocking histidine breakdown spared folate for nucleotide production in this drug-stressed setting. Under methotrexate, FTCD depletion preserved THF and increased serine-derived labeling of IMP and TTP relative to controls. Model: Human cancer cells with FTCD depletion, metabolomics and U-13C-serine tracing. Limitations: Measured under methotrexate; do not generalize to normal folate demand or all tissues. Correction record: A 2022 author correction is indexed (PMID 35017686). The publisher-accessible record identifies corrected Fig. 1f, Extended Data Fig. 11, Supplementary Fig. 3 and source data for Figs. 1/2, including an erroneous doxorubicin replicate. Complete correction narrative was not accessible; its full impact is not independently cleared. The original study remains flagged corrected, and no comprehensive safety claim is made. https://www.nature.com/articles/s41586-021-03487-2 Evidence access: Primary full text Histidine catabolism is a major determinant of methotrexate sensitivity. · 2018 · https://pubmed.ncbi.nlm.nih.gov/29995852/ · DOI 10.1038/s41586-018-0316-7
    Complete structured claim and evidence
  18. CRISPR depletion of HAL reduced methotrexate sensitivity in the tested human cancer cells.

    Experimental context and source evidence
    availability_state
    machinery_impairment Imported condition classification; unverified.
    evidence_access
    Primary full text
    experimental_model
    Human hematopoietic cancer-cell CRISPR experiments.
    limitations
    Enzyme depletion is different from lowering dietary histidine. Correction record: A 2022 author correction is indexed (PMID 35017686). The publisher-accessible record identifies corrected Fig. 1f, Extended Data Fig. 11, Supplementary Fig. 3 and source data for Figs. 1/2, including an erroneous doxorubicin replicate. Complete correction narrative was not accessible; its full impact is not independently cleared. The original study remains flagged corrected, and no comprehensive safety claim is made. https://www.nature.com/articles/s41586-021-03487-2
    nutrient_topic
    L-Histidine collection; species, compartment, exposure, co-substrates and manipulation remain explicit. · L-Histidine
    plain_language
    An upstream histidine-breakdown step also changed drug sensitivity.
    primary_references
    Histidine catabolism is a major determinant of methotrexate sensitivity. · 2018 · https://pubmed.ncbi.nlm.nih.gov/29995852/ · DOI 10.1038/s41586-018-0316-7
    trigger_kind
    machinery_impairment Imported condition classification; unverified.

    L-Histidine: supply, catabolism, histamine, receptors and cross-nutrient mechanisms (2026-09-19) · lines 162–168

    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Human hematopoietic cancer-cell CRISPR experiments. · source_derived_draft · unverified_draft

    ## histidine-hal-loss-mtx An upstream histidine-breakdown step also changed drug sensitivity. CRISPR depletion of HAL reduced methotrexate sensitivity in the tested human cancer cells. Model: Human hematopoietic cancer-cell CRISPR experiments. Limitations: Enzyme depletion is different from lowering dietary histidine. Correction record: A 2022 author correction is indexed (PMID 35017686). The publisher-accessible record identifies corrected Fig. 1f, Extended Data Fig. 11, Supplementary Fig. 3 and source data for Figs. 1/2, including an erroneous doxorubicin replicate. Complete correction narrative was not accessible; its full impact is not independently cleared. The original study remains flagged corrected, and no comprehensive safety claim is made. https://www.nature.com/articles/s41586-021-03487-2 Evidence access: Primary full text Histidine catabolism is a major determinant of methotrexate sensitivity. · 2018 · https://pubmed.ncbi.nlm.nih.gov/29995852/ · DOI 10.1038/s41586-018-0316-7
    Complete structured claim and evidence
  19. CRISPR depletion of AMDHD1 reduced methotrexate sensitivity in the tested human cancer cells.

    Experimental context and source evidence
    availability_state
    machinery_impairment Imported condition classification; unverified.
    evidence_access
    Primary full text
    experimental_model
    Human hematopoietic cancer-cell CRISPR experiments.
    limitations
    Enzyme depletion is different from lowering dietary histidine. Correction record: A 2022 author correction is indexed (PMID 35017686). The publisher-accessible record identifies corrected Fig. 1f, Extended Data Fig. 11, Supplementary Fig. 3 and source data for Figs. 1/2, including an erroneous doxorubicin replicate. Complete correction narrative was not accessible; its full impact is not independently cleared. The original study remains flagged corrected, and no comprehensive safety claim is made. https://www.nature.com/articles/s41586-021-03487-2
    nutrient_topic
    L-Histidine collection; species, compartment, exposure, co-substrates and manipulation remain explicit. · L-Histidine
    plain_language
    An upstream histidine-breakdown step also changed drug sensitivity.
    primary_references
    Histidine catabolism is a major determinant of methotrexate sensitivity. · 2018 · https://pubmed.ncbi.nlm.nih.gov/29995852/ · DOI 10.1038/s41586-018-0316-7
    trigger_kind
    machinery_impairment Imported condition classification; unverified.

    L-Histidine: supply, catabolism, histamine, receptors and cross-nutrient mechanisms (2026-09-19) · lines 170–176

    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Human hematopoietic cancer-cell CRISPR experiments. · source_derived_draft · unverified_draft

    ## histidine-amdhd-loss-mtx An upstream histidine-breakdown step also changed drug sensitivity. CRISPR depletion of AMDHD1 reduced methotrexate sensitivity in the tested human cancer cells. Model: Human hematopoietic cancer-cell CRISPR experiments. Limitations: Enzyme depletion is different from lowering dietary histidine. Correction record: A 2022 author correction is indexed (PMID 35017686). The publisher-accessible record identifies corrected Fig. 1f, Extended Data Fig. 11, Supplementary Fig. 3 and source data for Figs. 1/2, including an erroneous doxorubicin replicate. Complete correction narrative was not accessible; its full impact is not independently cleared. The original study remains flagged corrected, and no comprehensive safety claim is made. https://www.nature.com/articles/s41586-021-03487-2 Evidence access: Primary full text Histidine catabolism is a major determinant of methotrexate sensitivity. · 2018 · https://pubmed.ncbi.nlm.nih.gov/29995852/ · DOI 10.1038/s41586-018-0316-7
    Complete structured claim and evidence
  20. Combined histidine and methotrexate reduced HEL/SEM xenograft size more than either single treatment in the reported main mouse experiment.

    Experimental context and source evidence
    evidence_access
    Primary full text
    experimental_model
    NOD-SCID mice with human leukemia xenografts; daily injections for five days, histidine 400 microliters at 46 mg/mL and methotrexate 50 mg/kg.
    limitations
    Main methods specify injections despite dietary terminology in the abstract. No oral human combination trial or treatment recommendation; longer mouse experiments do not establish human safety. Correction record: A 2022 author correction is indexed (PMID 35017686). The publisher-accessible record identifies corrected Fig. 1f, Extended Data Fig. 11, Supplementary Fig. 3 and source data for Figs. 1/2, including an erroneous doxorubicin replicate. Complete correction narrative was not accessible; its full impact is not independently cleared. The original study remains flagged corrected, and no comprehensive safety claim is made. https://www.nature.com/articles/s41586-021-03487-2
    nutrient_topic
    L-Histidine collection; species, compartment, exposure, co-substrates and manipulation remain explicit. · L-Histidine
    plain_language
    Changing substrate supply strengthened a drug effect in this animal model.
    primary_references
    Histidine catabolism is a major determinant of methotrexate sensitivity. · 2018 · https://pubmed.ncbi.nlm.nih.gov/29995852/ · DOI 10.1038/s41586-018-0316-7

    L-Histidine: supply, catabolism, histamine, receptors and cross-nutrient mechanisms (2026-09-19) · lines 178–184

    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · NOD-SCID mice with human leukemia xenografts; daily injections for five days, histidine 400 microliters at 46 mg/mL and methotrexate 50 mg/kg. · source_derived_draft · unverified_draft

    ## histidine-histidine-mtx-xenograft Changing substrate supply strengthened a drug effect in this animal model. Combined histidine and methotrexate reduced HEL/SEM xenograft size more than either single treatment in the reported main mouse experiment. Model: NOD-SCID mice with human leukemia xenografts; daily injections for five days, histidine 400 microliters at 46 mg/mL and methotrexate 50 mg/kg. Limitations: Main methods specify injections despite dietary terminology in the abstract. No oral human combination trial or treatment recommendation; longer mouse experiments do not establish human safety. Correction record: A 2022 author correction is indexed (PMID 35017686). The publisher-accessible record identifies corrected Fig. 1f, Extended Data Fig. 11, Supplementary Fig. 3 and source data for Figs. 1/2, including an erroneous doxorubicin replicate. Complete correction narrative was not accessible; its full impact is not independently cleared. The original study remains flagged corrected, and no comprehensive safety claim is made. https://www.nature.com/articles/s41586-021-03487-2 Evidence access: Primary full text Histidine catabolism is a major determinant of methotrexate sensitivity. · 2018 · https://pubmed.ncbi.nlm.nih.gov/29995852/ · DOI 10.1038/s41586-018-0316-7
    Complete structured claim and evidence
  21. A girl with urocanic aciduria carried UROC1 L70P/R450C variants; expression and activity studies supported impaired enzyme function.

    Experimental context and source evidence
    availability_state
    machinery_impairment Imported condition classification; unverified.
    evidence_access
    Primary abstract
    experimental_model
    Single human case plus variant expression, enzyme assays and computational interpretation.
    limitations
    The biochemical association is stronger than attribution of every neurological feature in a single patient.
    nutrient_topic
    L-Histidine collection; species, compartment, exposure, co-substrates and manipulation remain explicit. · L-Histidine
    plain_language
    A block at the second enzyme allowed an upstream metabolite to accumulate.
    primary_references
    Mutations in the urocanase gene UROC1 are associated with urocanic aciduria. · 2009 · https://pubmed.ncbi.nlm.nih.gov/19304569/ · DOI 10.1136/jmg.2008.060632
    trigger_kind
    machinery_impairment Imported condition classification; unverified.

    L-Histidine: supply, catabolism, histamine, receptors and cross-nutrient mechanisms (2026-09-19) · lines 186–192

    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Single human case plus variant expression, enzyme assays and computational interpretation. · source_derived_draft · unverified_draft

    ## histidine-uroc-human-loss A block at the second enzyme allowed an upstream metabolite to accumulate. A girl with urocanic aciduria carried UROC1 L70P/R450C variants; expression and activity studies supported impaired enzyme function. Model: Single human case plus variant expression, enzyme assays and computational interpretation. Limitations: The biochemical association is stronger than attribution of every neurological feature in a single patient. Evidence access: Primary abstract Mutations in the urocanase gene UROC1 are associated with urocanic aciduria. · 2009 · https://pubmed.ncbi.nlm.nih.gov/19304569/ · DOI 10.1136/jmg.2008.060632
    Complete structured claim and evidence
  22. Among 18 newborn-screen-detected FTCD-deficient patients, most were asymptomatic at mean 56-month follow-up; 3/18 had educationally significant developmental delay and 4/16 mild self-limited anemia.

    Human FTCD deficiency → N-Formimino-L-glutamate source_derived_draftungraded
    Experimental context and source evidence
    availability_state
    machinery_impairment Imported condition classification; unverified.
    evidence_access
    Primary abstract
    experimental_model
    Retrospective two-center newborn-screen cohort.
    limitations
    Ascertainment differs from early severe case series; follow-up is limited and this does not exclude later or rare severe effects. Correction record: The 2019 publisher erratum corrects patient 4 genotypes to c.1366dupG (p.E456Gfs*56) and c.236A>C (p.Q79P). The imported cohort-outcome claim does not use the erroneous genotype labels. https://onlinelibrary.wiley.com/doi/10.1002/jimd.12145
    nutrient_topic
    L-Histidine collection; species, compartment, exposure, co-substrates and manipulation remain explicit. · L-Histidine
    plain_language
    A biochemical processing defect did not uniformly produce severe disease.
    primary_references
    Characteristics and outcomes of patients with formiminoglutamic aciduria detected through newborn screening. · 2019 · https://pubmed.ncbi.nlm.nih.gov/30740726/ · DOI 10.1002/jimd.12035
    trigger_kind
    machinery_impairment Imported condition classification; unverified.

    L-Histidine: supply, catabolism, histamine, receptors and cross-nutrient mechanisms (2026-09-19) · lines 194–200

    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Retrospective two-center newborn-screen cohort. · source_derived_draft · unverified_draft

    ## histidine-ftcd-screening-spectrum A biochemical processing defect did not uniformly produce severe disease. Among 18 newborn-screen-detected FTCD-deficient patients, most were asymptomatic at mean 56-month follow-up; 3/18 had educationally significant developmental delay and 4/16 mild self-limited anemia. Model: Retrospective two-center newborn-screen cohort. Limitations: Ascertainment differs from early severe case series; follow-up is limited and this does not exclude later or rare severe effects. Correction record: The 2019 publisher erratum corrects patient 4 genotypes to c.1366dupG (p.E456Gfs*56) and c.236A>C (p.Q79P). The imported cohort-outcome claim does not use the erroneous genotype labels. https://onlinelibrary.wiley.com/doi/10.1002/jimd.12145 Evidence access: Primary abstract Characteristics and outcomes of patients with formiminoglutamic aciduria detected through newborn screening. · 2019 · https://pubmed.ncbi.nlm.nih.gov/30740726/ · DOI 10.1002/jimd.12035
    Complete structured claim and evidence
  23. Long-term follow-up of screen-detected histidinemia found normal growth, no relation of plasma histidine to DQ/IQ and no apparent benefit from early low-histidine diet.

    Experimental context and source evidence
    availability_state
    machinery_impairment Imported condition classification; unverified.
    evidence_access
    Primary abstract
    experimental_model
    113 detected children, nine lost to follow-up; 47 historically treated before 1981, others untreated.
    limitations
    Observational and nonrandom treatment allocation; not a general high-dose supplement safety study.
    nutrient_topic
    L-Histidine collection; species, compartment, exposure, co-substrates and manipulation remain explicit. · L-Histidine
    plain_language
    Higher histidine from slow breakdown did not by itself predict developmental impairment in this cohort.
    primary_references
    Histidinaemia: a benign metabolic disorder. · 1996 · https://pubmed.ncbi.nlm.nih.gov/8669938/ · DOI 10.1136/adc.74.4.343
    trigger_kind
    machinery_impairment Imported condition classification; unverified.

    L-Histidine: supply, catabolism, histamine, receptors and cross-nutrient mechanisms (2026-09-19) · lines 202–208

    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · 113 detected children, nine lost to follow-up; 47 historically treated before 1981, others untreated. · source_derived_draft · unverified_draft

    ## histidine-histidinemia-followup Higher histidine from slow breakdown did not by itself predict developmental impairment in this cohort. Long-term follow-up of screen-detected histidinemia found normal growth, no relation of plasma histidine to DQ/IQ and no apparent benefit from early low-histidine diet. Model: 113 detected children, nine lost to follow-up; 47 historically treated before 1981, others untreated. Limitations: Observational and nonrandom treatment allocation; not a general high-dose supplement safety study. Evidence access: Primary abstract Histidinaemia: a benign metabolic disorder. · 1996 · https://pubmed.ncbi.nlm.nih.gov/8669938/ · DOI 10.1136/adc.74.4.343
    Complete structured claim and evidence
  24. Human HNMT methylates histamine using SAM; structural complexes locate histamine and the reaction product SAH at the enzyme.

    Experimental context and source evidence
    evidence_access
    Primary abstract
    experimental_model
    Purified recombinant human enzyme; ternary structures and steady-state kinetics.
    limitations
    A shared SAM requirement does not prove clinically important methyl depletion from histamine turnover.
    nutrient_topic
    L-Histidine collection; species, compartment, exposure, co-substrates and manipulation remain explicit. · L-Histidine
    plain_language
    Histamine disposal connects to the cellular methyl-donor system.
    primary_references
    Two polymorphic forms of human histamine methyltransferase: structural, thermal, and kinetic comparisons. · 2001 · https://pubmed.ncbi.nlm.nih.gov/11566133/ · DOI 10.1016/s0969-2126(01)00643-8

    L-Histidine: supply, catabolism, histamine, receptors and cross-nutrient mechanisms (2026-09-19) · lines 210–216

    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Purified recombinant human enzyme; ternary structures and steady-state kinetics. · source_derived_draft · unverified_draft

    ## histidine-hnmt-methylation Histamine disposal connects to the cellular methyl-donor system. Human HNMT methylates histamine using SAM; structural complexes locate histamine and the reaction product SAH at the enzyme. Model: Purified recombinant human enzyme; ternary structures and steady-state kinetics. Limitations: A shared SAM requirement does not prove clinically important methyl depletion from histamine turnover. Evidence access: Primary abstract Two polymorphic forms of human histamine methyltransferase: structural, thermal, and kinetic comparisons. · 2001 · https://pubmed.ncbi.nlm.nih.gov/11566133/ · DOI 10.1016/s0969-2126(01)00643-8
    Complete structured claim and evidence
  25. Recombinant Ile105 HNMT had about 16 percent lower specific activity and higher apparent Km for SAM and histamine than Thr105 across 25-45 degrees C.

    Experimental context and source evidence
    evidence_access
    Primary abstract
    experimental_model
    Human recombinant enzyme comparison.
    limitations
    Results paragraph reports increased Km; the abstract conclusion says lowered Km. Numerical results are retained as a source wording discrepancy, not two independent experiments. No clinical symptom prediction.
    nutrient_topic
    L-Histidine collection; species, compartment, exposure, co-substrates and manipulation remain explicit. · L-Histidine
    plain_language
    A common enzyme variant changed the measured reaction kinetics.
    primary_references
    Two polymorphic forms of human histamine methyltransferase: structural, thermal, and kinetic comparisons. · 2001 · https://pubmed.ncbi.nlm.nih.gov/11566133/ · DOI 10.1016/s0969-2126(01)00643-8

    L-Histidine: supply, catabolism, histamine, receptors and cross-nutrient mechanisms (2026-09-19) · lines 218–224

    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Human recombinant enzyme comparison. · source_derived_draft · unverified_draft

    ## histidine-hnmt-variant A common enzyme variant changed the measured reaction kinetics. Recombinant Ile105 HNMT had about 16 percent lower specific activity and higher apparent Km for SAM and histamine than Thr105 across 25-45 degrees C. Model: Human recombinant enzyme comparison. Limitations: Results paragraph reports increased Km; the abstract conclusion says lowered Km. Numerical results are retained as a source wording discrepancy, not two independent experiments. No clinical symptom prediction. Evidence access: Primary abstract Two polymorphic forms of human histamine methyltransferase: structural, thermal, and kinetic comparisons. · 2001 · https://pubmed.ncbi.nlm.nih.gov/11566133/ · DOI 10.1016/s0969-2126(01)00643-8
    Complete structured claim and evidence
  26. Histamine-bound human H1 receptor was resolved with an engineered Gq-family protein complex, with binding and functional mutagenesis supporting ligand recognition and coupling.

    Histamine → Human histamine H1 receptor / HRH1 source_derived_draftungraded
    Experimental context and source evidence
    evidence_access
    Primary full text
    experimental_model
    Engineered human receptor complexes produced in insect cells, cryo-EM and HEK293 binding/G-protein assays.
    limitations
    Structural stabilization, chimeric/mini G proteins and recombinant cells differ from native tissues; receptor engagement is not proof that oral histidine produces this response.
    nutrient_topic
    L-Histidine collection; species, compartment, exposure, co-substrates and manipulation remain explicit. · L-Histidine
    plain_language
    The same histidine-derived messenger can activate a distinct receptor route.
    primary_references
    Structural basis of ligand recognition and activation of the histamine receptor family. · 2024 · https://pubmed.ncbi.nlm.nih.gov/39333117/ · DOI 10.1038/s41467-024-52585-y

    L-Histidine: supply, catabolism, histamine, receptors and cross-nutrient mechanisms (2026-09-19) · lines 226–232

    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Engineered human receptor complexes produced in insect cells, cryo-EM and HEK293 binding/G-protein assays. · source_derived_draft · unverified_draft

    ## histidine-h1-activation The same histidine-derived messenger can activate a distinct receptor route. Histamine-bound human H1 receptor was resolved with an engineered Gq-family protein complex, with binding and functional mutagenesis supporting ligand recognition and coupling. Model: Engineered human receptor complexes produced in insect cells, cryo-EM and HEK293 binding/G-protein assays. Limitations: Structural stabilization, chimeric/mini G proteins and recombinant cells differ from native tissues; receptor engagement is not proof that oral histidine produces this response. Evidence access: Primary full text Structural basis of ligand recognition and activation of the histamine receptor family. · 2024 · https://pubmed.ncbi.nlm.nih.gov/39333117/ · DOI 10.1038/s41467-024-52585-y
    Complete structured claim and evidence
  27. Histamine-bound human H2 receptor was resolved with an engineered Gs-family protein complex, with binding and functional mutagenesis supporting ligand recognition and coupling.

    Histamine → Human histamine H2 receptor / HRH2 source_derived_draftungraded
    Experimental context and source evidence
    evidence_access
    Primary full text
    experimental_model
    Engineered human receptor complexes produced in insect cells, cryo-EM and HEK293 binding/G-protein assays.
    limitations
    Structural stabilization, chimeric/mini G proteins and recombinant cells differ from native tissues; receptor engagement is not proof that oral histidine produces this response.
    nutrient_topic
    L-Histidine collection; species, compartment, exposure, co-substrates and manipulation remain explicit. · L-Histidine
    plain_language
    The same histidine-derived messenger can activate a distinct receptor route.
    primary_references
    Structural basis of ligand recognition and activation of the histamine receptor family. · 2024 · https://pubmed.ncbi.nlm.nih.gov/39333117/ · DOI 10.1038/s41467-024-52585-y

    L-Histidine: supply, catabolism, histamine, receptors and cross-nutrient mechanisms (2026-09-19) · lines 234–240

    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Engineered human receptor complexes produced in insect cells, cryo-EM and HEK293 binding/G-protein assays. · source_derived_draft · unverified_draft

    ## histidine-h2-activation The same histidine-derived messenger can activate a distinct receptor route. Histamine-bound human H2 receptor was resolved with an engineered Gs-family protein complex, with binding and functional mutagenesis supporting ligand recognition and coupling. Model: Engineered human receptor complexes produced in insect cells, cryo-EM and HEK293 binding/G-protein assays. Limitations: Structural stabilization, chimeric/mini G proteins and recombinant cells differ from native tissues; receptor engagement is not proof that oral histidine produces this response. Evidence access: Primary full text Structural basis of ligand recognition and activation of the histamine receptor family. · 2024 · https://pubmed.ncbi.nlm.nih.gov/39333117/ · DOI 10.1038/s41467-024-52585-y
    Complete structured claim and evidence
  28. Histamine-bound human H3 receptor was resolved with an engineered Gi-family protein complex, with binding and functional mutagenesis supporting ligand recognition and coupling.

    Histamine → Human histamine H3 receptor / HRH3 source_derived_draftungraded
    Experimental context and source evidence
    evidence_access
    Primary full text
    experimental_model
    Engineered human receptor complexes produced in insect cells, cryo-EM and HEK293 binding/G-protein assays.
    limitations
    Structural stabilization, chimeric/mini G proteins and recombinant cells differ from native tissues; receptor engagement is not proof that oral histidine produces this response.
    nutrient_topic
    L-Histidine collection; species, compartment, exposure, co-substrates and manipulation remain explicit. · L-Histidine
    plain_language
    The same histidine-derived messenger can activate a distinct receptor route.
    primary_references
    Structural basis of ligand recognition and activation of the histamine receptor family. · 2024 · https://pubmed.ncbi.nlm.nih.gov/39333117/ · DOI 10.1038/s41467-024-52585-y

    L-Histidine: supply, catabolism, histamine, receptors and cross-nutrient mechanisms (2026-09-19) · lines 242–248

    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Engineered human receptor complexes produced in insect cells, cryo-EM and HEK293 binding/G-protein assays. · source_derived_draft · unverified_draft

    ## histidine-h3-activation The same histidine-derived messenger can activate a distinct receptor route. Histamine-bound human H3 receptor was resolved with an engineered Gi-family protein complex, with binding and functional mutagenesis supporting ligand recognition and coupling. Model: Engineered human receptor complexes produced in insect cells, cryo-EM and HEK293 binding/G-protein assays. Limitations: Structural stabilization, chimeric/mini G proteins and recombinant cells differ from native tissues; receptor engagement is not proof that oral histidine produces this response. Evidence access: Primary full text Structural basis of ligand recognition and activation of the histamine receptor family. · 2024 · https://pubmed.ncbi.nlm.nih.gov/39333117/ · DOI 10.1038/s41467-024-52585-y
    Complete structured claim and evidence
  29. Histamine-bound human H4 receptor was resolved with an engineered Gi-family protein complex, with binding and functional mutagenesis supporting ligand recognition and coupling.

    Histamine → Human histamine H4 receptor / HRH4 source_derived_draftungraded
    Experimental context and source evidence
    evidence_access
    Primary full text
    experimental_model
    Engineered human receptor complexes produced in insect cells, cryo-EM and HEK293 binding/G-protein assays.
    limitations
    Structural stabilization, chimeric/mini G proteins and recombinant cells differ from native tissues; receptor engagement is not proof that oral histidine produces this response.
    nutrient_topic
    L-Histidine collection; species, compartment, exposure, co-substrates and manipulation remain explicit. · L-Histidine
    plain_language
    The same histidine-derived messenger can activate a distinct receptor route.
    primary_references
    Structural basis of ligand recognition and activation of the histamine receptor family. · 2024 · https://pubmed.ncbi.nlm.nih.gov/39333117/ · DOI 10.1038/s41467-024-52585-y

    L-Histidine: supply, catabolism, histamine, receptors and cross-nutrient mechanisms (2026-09-19) · lines 250–256

    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Engineered human receptor complexes produced in insect cells, cryo-EM and HEK293 binding/G-protein assays. · source_derived_draft · unverified_draft

    ## histidine-h4-activation The same histidine-derived messenger can activate a distinct receptor route. Histamine-bound human H4 receptor was resolved with an engineered Gi-family protein complex, with binding and functional mutagenesis supporting ligand recognition and coupling. Model: Engineered human receptor complexes produced in insect cells, cryo-EM and HEK293 binding/G-protein assays. Limitations: Structural stabilization, chimeric/mini G proteins and recombinant cells differ from native tissues; receptor engagement is not proof that oral histidine produces this response. Evidence access: Primary full text Structural basis of ligand recognition and activation of the histamine receptor family. · 2024 · https://pubmed.ncbi.nlm.nih.gov/39333117/ · DOI 10.1038/s41467-024-52585-y
    Complete structured claim and evidence
  30. Human H2 receptor W222A/V mutations abolished measured Gs activation while retaining Gq responses; the structural Gq complex used a G-alpha-s/q chimera.

    Experimental context and source evidence
    evidence_access
    Primary full text
    experimental_model
    Recombinant human receptor mutagenesis and G-protein dissociation assays.
    limitations
    Do not label H2 as exclusively Gs-coupled; chimera-supported structure and native Gq signaling are distinct evidence types.
    nutrient_topic
    L-Histidine collection; species, compartment, exposure, co-substrates and manipulation remain explicit. · L-Histidine
    plain_language
    A receptor can use more than one signaling partner, with separable structural requirements.
    primary_references
    Structural basis of ligand recognition and activation of the histamine receptor family. · 2024 · https://pubmed.ncbi.nlm.nih.gov/39333117/ · DOI 10.1038/s41467-024-52585-y

    L-Histidine: supply, catabolism, histamine, receptors and cross-nutrient mechanisms (2026-09-19) · lines 258–264

    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Recombinant human receptor mutagenesis and G-protein dissociation assays. · source_derived_draft · unverified_draft

    ## histidine-h2-coupling-selectivity A receptor can use more than one signaling partner, with separable structural requirements. Human H2 receptor W222A/V mutations abolished measured Gs activation while retaining Gq responses; the structural Gq complex used a G-alpha-s/q chimera. Model: Recombinant human receptor mutagenesis and G-protein dissociation assays. Limitations: Do not label H2 as exclusively Gs-coupled; chimera-supported structure and native Gq signaling are distinct evidence types. Evidence access: Primary full text Structural basis of ligand recognition and activation of the histamine receptor family. · 2024 · https://pubmed.ncbi.nlm.nih.gov/39333117/ · DOI 10.1038/s41467-024-52585-y
    Complete structured claim and evidence
  31. Full-length and two-domain S. oneidensis UrdA converted urocanate to imidazole propionate and did not show the tested fumarate-reductase activity.

    Experimental context and source evidence
    evidence_access
    Primary full text
    experimental_model
    Purified bacterial full-length/truncated proteins, activity assays and ligand-bound crystal structures.
    limitations
    This species is a structural model; abundance or flux in an individual human microbiome is not measured.
    nutrient_topic
    L-Histidine collection; species, compartment, exposure, co-substrates and manipulation remain explicit. · L-Histidine
    plain_language
    A bacterial enzyme sends a histidine-derived intermediate down a different branch.
    primary_references
    Structural characterization of the microbial enzyme urocanate reductase mediating imidazole propionate production. · 2021 · https://pubmed.ncbi.nlm.nih.gov/33649331/ · DOI 10.1038/s41467-021-21548-y

    L-Histidine: supply, catabolism, histamine, receptors and cross-nutrient mechanisms (2026-09-19) · lines 266–272

    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Purified bacterial full-length/truncated proteins, activity assays and ligand-bound crystal structures. · source_derived_draft · unverified_draft

    ## histidine-urda-product A bacterial enzyme sends a histidine-derived intermediate down a different branch. Full-length and two-domain S. oneidensis UrdA converted urocanate to imidazole propionate and did not show the tested fumarate-reductase activity. Model: Purified bacterial full-length/truncated proteins, activity assays and ligand-bound crystal structures. Limitations: This species is a structural model; abundance or flux in an individual human microbiome is not measured. Evidence access: Primary full text Structural characterization of the microbial enzyme urocanate reductase mediating imidazole propionate production. · 2021 · https://pubmed.ncbi.nlm.nih.gov/33649331/ · DOI 10.1038/s41467-021-21548-y
    Complete structured claim and evidence
  32. The UrdA catalytic-domain structures contained FAD alongside substrate or product, and assays supported flavin-associated urocanate reduction.

    Experimental context and source evidence
    evidence_access
    Primary full text
    experimental_model
    Bacterial structural enzymology; FAD-supplemented enzyme assays.
    limitations
    Does not show that human riboflavin intake limits or increases microbial imidazole-propionate production.
    nutrient_topic
    L-Histidine collection; species, compartment, exposure, co-substrates and manipulation remain explicit. · L-Histidine
    plain_language
    This microbial reaction uses a riboflavin-derived chemical tool.
    primary_references
    Structural characterization of the microbial enzyme urocanate reductase mediating imidazole propionate production. · 2021 · https://pubmed.ncbi.nlm.nih.gov/33649331/ · DOI 10.1038/s41467-021-21548-y

    L-Histidine: supply, catabolism, histamine, receptors and cross-nutrient mechanisms (2026-09-19) · lines 274–280

    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Bacterial structural enzymology; FAD-supplemented enzyme assays. · source_derived_draft · unverified_draft

    ## histidine-urda-flavin This microbial reaction uses a riboflavin-derived chemical tool. The UrdA catalytic-domain structures contained FAD alongside substrate or product, and assays supported flavin-associated urocanate reduction. Model: Bacterial structural enzymology; FAD-supplemented enzyme assays. Limitations: Does not show that human riboflavin intake limits or increases microbial imidazole-propionate production. Evidence access: Primary full text Structural characterization of the microbial enzyme urocanate reductase mediating imidazole propionate production. · 2021 · https://pubmed.ncbi.nlm.nih.gov/33649331/ · DOI 10.1038/s41467-021-21548-y
    Complete structured claim and evidence
  33. Fecal microbiota from donors with type 2 diabetes generated more imidazole propionate from histidine in the gut simulator than microbiota from donors without diabetes.

    L-Histidine → Imidazole propionate source_derived_draftungraded
    Experimental context and source evidence
    evidence_access
    Primary abstract
    experimental_model
    Human-donor fecal communities in a gut simulator.
    limitations
    Ex-vivo community behavior is not a controlled human histidine-feeding outcome.
    nutrient_topic
    L-Histidine collection; species, compartment, exposure, co-substrates and manipulation remain explicit. · L-Histidine
    plain_language
    The same substrate produced different output with different microbial communities.
    primary_references
    Microbially Produced Imidazole Propionate Impairs Insulin Signaling through mTORC1. · 2018 · https://pubmed.ncbi.nlm.nih.gov/30401435/ · DOI 10.1016/j.cell.2018.09.055

    L-Histidine: supply, catabolism, histamine, receptors and cross-nutrient mechanisms (2026-09-19) · lines 282–288

    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Human-donor fecal communities in a gut simulator. · source_derived_draft · unverified_draft

    ## histidine-microbial-imp-generation The same substrate produced different output with different microbial communities. Fecal microbiota from donors with type 2 diabetes generated more imidazole propionate from histidine in the gut simulator than microbiota from donors without diabetes. Model: Human-donor fecal communities in a gut simulator. Limitations: Ex-vivo community behavior is not a controlled human histidine-feeding outcome. Evidence access: Primary abstract Microbially Produced Imidazole Propionate Impairs Insulin Signaling through mTORC1. · 2018 · https://pubmed.ncbi.nlm.nih.gov/30401435/ · DOI 10.1016/j.cell.2018.09.055
    Complete structured claim and evidence
  34. Circulating imidazole propionate was higher in the studied people with type 2 diabetes than comparison participants.

    Experimental context and source evidence
    evidence_access
    Primary abstract
    experimental_model
    Human observational metabolomics.
    limitations
    Association alone does not establish direction, causality or an individual diagnostic threshold.
    nutrient_topic
    L-Histidine collection; species, compartment, exposure, co-substrates and manipulation remain explicit. · L-Histidine
    plain_language
    A histidine-derived microbial metabolite tracked a metabolic phenotype.
    primary_references
    Microbially Produced Imidazole Propionate Impairs Insulin Signaling through mTORC1. · 2018 · https://pubmed.ncbi.nlm.nih.gov/30401435/ · DOI 10.1016/j.cell.2018.09.055

    L-Histidine: supply, catabolism, histamine, receptors and cross-nutrient mechanisms (2026-09-19) · lines 290–296

    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Human observational metabolomics. · source_derived_draft · unverified_draft

    ## histidine-imp-human-association A histidine-derived microbial metabolite tracked a metabolic phenotype. Circulating imidazole propionate was higher in the studied people with type 2 diabetes than comparison participants. Model: Human observational metabolomics. Limitations: Association alone does not establish direction, causality or an individual diagnostic threshold. Evidence access: Primary abstract Microbially Produced Imidazole Propionate Impairs Insulin Signaling through mTORC1. · 2018 · https://pubmed.ncbi.nlm.nih.gov/30401435/ · DOI 10.1016/j.cell.2018.09.055
    Complete structured claim and evidence
  35. Administering imidazole propionate impaired glucose tolerance in the reported mouse experiments.

    Experimental context and source evidence
    evidence_access
    Primary abstract
    experimental_model
    Mouse metabolite-administration study; dose details not extracted from accessed primary abstract.
    limitations
    Not a dietary-histidine intervention or a demonstrated human clinical effect.
    nutrient_topic
    L-Histidine collection; species, compartment, exposure, co-substrates and manipulation remain explicit. · L-Histidine
    plain_language
    Giving the microbial product affected glucose control in an animal experiment.
    primary_references
    Microbially Produced Imidazole Propionate Impairs Insulin Signaling through mTORC1. · 2018 · https://pubmed.ncbi.nlm.nih.gov/30401435/ · DOI 10.1016/j.cell.2018.09.055

    L-Histidine: supply, catabolism, histamine, receptors and cross-nutrient mechanisms (2026-09-19) · lines 298–304

    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Mouse metabolite-administration study; dose details not extracted from accessed primary abstract. · source_derived_draft · unverified_draft

    ## histidine-imp-mouse-tolerance Giving the microbial product affected glucose control in an animal experiment. Administering imidazole propionate impaired glucose tolerance in the reported mouse experiments. Model: Mouse metabolite-administration study; dose details not extracted from accessed primary abstract. Limitations: Not a dietary-histidine intervention or a demonstrated human clinical effect. Evidence access: Primary abstract Microbially Produced Imidazole Propionate Impairs Insulin Signaling through mTORC1. · 2018 · https://pubmed.ncbi.nlm.nih.gov/30401435/ · DOI 10.1016/j.cell.2018.09.055
    Complete structured claim and evidence
  36. The 2018 study linked imidazole-propionate-activated p38-gamma to p62 phosphorylation.

    Experimental context and source evidence
    evidence_access
    Primary abstract
    experimental_model
    Biochemical/cellular experiments summarized in the primary abstract; study also contains mouse intervention and human observations.
    limitations
    The abstract does not resolve species and construct for each biochemical step; assay proteins are not silently assigned human identity.
    nutrient_topic
    L-Histidine collection; species, compartment, exposure, co-substrates and manipulation remain explicit. · L-Histidine
    plain_language
    A kinase relays the microbial-metabolite signal to an adaptor protein.
    primary_references
    Microbially Produced Imidazole Propionate Impairs Insulin Signaling through mTORC1. · 2018 · https://pubmed.ncbi.nlm.nih.gov/30401435/ · DOI 10.1016/j.cell.2018.09.055

    L-Histidine: supply, catabolism, histamine, receptors and cross-nutrient mechanisms (2026-09-19) · lines 306–312

    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Biochemical/cellular experiments summarized in the primary abstract; study also contains mouse intervention and human observations. · source_derived_draft · unverified_draft

    ## histidine-imp-p38-p62 A kinase relays the microbial-metabolite signal to an adaptor protein. The 2018 study linked imidazole-propionate-activated p38-gamma to p62 phosphorylation. Model: Biochemical/cellular experiments summarized in the primary abstract; study also contains mouse intervention and human observations. Limitations: The abstract does not resolve species and construct for each biochemical step; assay proteins are not silently assigned human identity. Evidence access: Primary abstract Microbially Produced Imidazole Propionate Impairs Insulin Signaling through mTORC1. · 2018 · https://pubmed.ncbi.nlm.nih.gov/30401435/ · DOI 10.1016/j.cell.2018.09.055
    Complete structured claim and evidence
  37. The study connected p62 phosphorylation to mTORC1 activation and impaired signaling at insulin receptor substrate.

    Experimental context and source evidence
    evidence_access
    Primary abstract
    experimental_model
    Primary abstract-level biochemical/cellular pathway report.
    limitations
    Complete construct, dose and cell-specific mapping remains a follow-up; this route is distinct from ordinary dietary histidine intake.
    nutrient_topic
    L-Histidine collection; species, compartment, exposure, co-substrates and manipulation remain explicit. · L-Histidine
    plain_language
    The adaptor connects this branch to nutrient-sensitive signaling and insulin response.
    primary_references
    Microbially Produced Imidazole Propionate Impairs Insulin Signaling through mTORC1. · 2018 · https://pubmed.ncbi.nlm.nih.gov/30401435/ · DOI 10.1016/j.cell.2018.09.055

    L-Histidine: supply, catabolism, histamine, receptors and cross-nutrient mechanisms (2026-09-19) · lines 314–320

    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Primary abstract-level biochemical/cellular pathway report. · source_derived_draft · unverified_draft

    ## histidine-imp-p62-mtor The adaptor connects this branch to nutrient-sensitive signaling and insulin response. The study connected p62 phosphorylation to mTORC1 activation and impaired signaling at insulin receptor substrate. Model: Primary abstract-level biochemical/cellular pathway report. Limitations: Complete construct, dose and cell-specific mapping remains a follow-up; this route is distinct from ordinary dietary histidine intake. Evidence access: Primary abstract Microbially Produced Imidazole Propionate Impairs Insulin Signaling through mTORC1. · 2018 · https://pubmed.ncbi.nlm.nih.gov/30401435/ · DOI 10.1016/j.cell.2018.09.055
    Complete structured claim and evidence
  38. In HEK293 experiments, imidazole propionate increased basal Akt phosphorylation; p38-gamma knockdown blocked the Akt and inhibitory AMPK phosphorylation responses.

    Experimental context and source evidence
    evidence_access
    Primary full text
    experimental_model
    Human HEK293 cells; time-dependent signaling, siRNA and recombinant-kinase validation.
    limitations
    Basal activation differs from insulin-stimulated activation. Recombinant assay construct species is not inferred from the human host cells.
    nutrient_topic
    L-Histidine collection; species, compartment, exposure, co-substrates and manipulation remain explicit. · L-Histidine
    plain_language
    A microbial product changed a kinase pathway, and removing one kinase interrupted the response.
    primary_references
    Microbial Imidazole Propionate Affects Responses to Metformin through p38γ-Dependent Inhibitory AMPK Phosphorylation. · 2020 · https://pubmed.ncbi.nlm.nih.gov/32783890/ · DOI 10.1016/j.cmet.2020.07.012

    L-Histidine: supply, catabolism, histamine, receptors and cross-nutrient mechanisms (2026-09-19) · lines 322–328

    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Human HEK293 cells; time-dependent signaling, siRNA and recombinant-kinase validation. · source_derived_draft · unverified_draft

    ## histidine-imp-akt A microbial product changed a kinase pathway, and removing one kinase interrupted the response. In HEK293 experiments, imidazole propionate increased basal Akt phosphorylation; p38-gamma knockdown blocked the Akt and inhibitory AMPK phosphorylation responses. Model: Human HEK293 cells; time-dependent signaling, siRNA and recombinant-kinase validation. Limitations: Basal activation differs from insulin-stimulated activation. Recombinant assay construct species is not inferred from the human host cells. Evidence access: Primary full text Microbial Imidazole Propionate Affects Responses to Metformin through p38γ-Dependent Inhibitory AMPK Phosphorylation. · 2020 · https://pubmed.ncbi.nlm.nih.gov/32783890/ · DOI 10.1016/j.cmet.2020.07.012
    Complete structured claim and evidence
  39. In HEK293 cells, imidazole propionate suppressed metformin-induced AMPK activation; expression of the study-labeled AMPK S485A mutant prevented suppression of activating T172 phosphorylation.

    Experimental context and source evidence
    evidence_access
    Primary full text
    experimental_model
    HEK293 expression and phosphorylation assays; the paper labels the construct site S485.
    limitations
    Construct site numbering is retained without silently mapping it to a human endogenous isoform. No universal AMPK inhibition across all tissues.
    nutrient_topic
    L-Histidine collection; species, compartment, exposure, co-substrates and manipulation remain explicit. · L-Histidine
    plain_language
    Changing the inhibitory phosphorylation site interrupted the measured drug interaction.
    primary_references
    Microbial Imidazole Propionate Affects Responses to Metformin through p38γ-Dependent Inhibitory AMPK Phosphorylation. · 2020 · https://pubmed.ncbi.nlm.nih.gov/32783890/ · DOI 10.1016/j.cmet.2020.07.012

    L-Histidine: supply, catabolism, histamine, receptors and cross-nutrient mechanisms (2026-09-19) · lines 330–336

    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · HEK293 expression and phosphorylation assays; the paper labels the construct site S485. · source_derived_draft · unverified_draft

    ## histidine-imp-ampk Changing the inhibitory phosphorylation site interrupted the measured drug interaction. In HEK293 cells, imidazole propionate suppressed metformin-induced AMPK activation; expression of the study-labeled AMPK S485A mutant prevented suppression of activating T172 phosphorylation. Model: HEK293 expression and phosphorylation assays; the paper labels the construct site S485. Limitations: Construct site numbering is retained without silently mapping it to a human endogenous isoform. No universal AMPK inhibition across all tissues. Evidence access: Primary full text Microbial Imidazole Propionate Affects Responses to Metformin through p38γ-Dependent Inhibitory AMPK Phosphorylation. · 2020 · https://pubmed.ncbi.nlm.nih.gov/32783890/ · DOI 10.1016/j.cmet.2020.07.012
    Complete structured claim and evidence
  40. The study distinguished p38-gamma-dependent basal Akt activation from mTORC1-dependent IRS loss; direct mTORC2 activation was not detected in the tested kinase assay.

    Experimental context and source evidence
    evidence_access
    Primary full text
    experimental_model
    Human-cell signaling, kinase assays and inhibitor/knockdown experiments.
    limitations
    Does not eliminate mTOR signaling from all imidazole-propionate effects; model and time point matter.
    nutrient_topic
    L-Histidine collection; species, compartment, exposure, co-substrates and manipulation remain explicit. · L-Histidine
    plain_language
    Two routes from the same metabolite have different timing and intermediates.
    primary_references
    Microbial Imidazole Propionate Affects Responses to Metformin through p38γ-Dependent Inhibitory AMPK Phosphorylation. · 2020 · https://pubmed.ncbi.nlm.nih.gov/32783890/ · DOI 10.1016/j.cmet.2020.07.012

    L-Histidine: supply, catabolism, histamine, receptors and cross-nutrient mechanisms (2026-09-19) · lines 338–344

    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Human-cell signaling, kinase assays and inhibitor/knockdown experiments. · source_derived_draft · unverified_draft

    ## histidine-imp-mtor-boundary Two routes from the same metabolite have different timing and intermediates. The study distinguished p38-gamma-dependent basal Akt activation from mTORC1-dependent IRS loss; direct mTORC2 activation was not detected in the tested kinase assay. Model: Human-cell signaling, kinase assays and inhibitor/knockdown experiments. Limitations: Does not eliminate mTOR signaling from all imidazole-propionate effects; model and time point matter. Evidence access: Primary full text Microbial Imidazole Propionate Affects Responses to Metformin through p38γ-Dependent Inhibitory AMPK Phosphorylation. · 2020 · https://pubmed.ncbi.nlm.nih.gov/32783890/ · DOI 10.1016/j.cmet.2020.07.012
    Complete structured claim and evidence
  41. Imidazole-propionate pretreatment prevented the measured glucose-lowering response to metformin in mice.

    Experimental context and source evidence
    evidence_access
    Primary full text
    experimental_model
    Mouse pretreatment and metformin experiments; separate from observational human plasma data.
    limitations
    Not evidence that histidine supplementation causes metformin failure in humans.
    nutrient_topic
    L-Histidine collection; species, compartment, exposure, co-substrates and manipulation remain explicit. · L-Histidine
    plain_language
    A microbial metabolite changed a drug response in an animal model.
    primary_references
    Microbial Imidazole Propionate Affects Responses to Metformin through p38γ-Dependent Inhibitory AMPK Phosphorylation. · 2020 · https://pubmed.ncbi.nlm.nih.gov/32783890/ · DOI 10.1016/j.cmet.2020.07.012

    L-Histidine: supply, catabolism, histamine, receptors and cross-nutrient mechanisms (2026-09-19) · lines 346–352

    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Mouse pretreatment and metformin experiments; separate from observational human plasma data. · source_derived_draft · unverified_draft

    ## histidine-imp-mouse-metformin A microbial metabolite changed a drug response in an animal model. Imidazole-propionate pretreatment prevented the measured glucose-lowering response to metformin in mice. Model: Mouse pretreatment and metformin experiments; separate from observational human plasma data. Limitations: Not evidence that histidine supplementation causes metformin failure in humans. Evidence access: Primary full text Microbial Imidazole Propionate Affects Responses to Metformin through p38γ-Dependent Inhibitory AMPK Phosphorylation. · 2020 · https://pubmed.ncbi.nlm.nih.gov/32783890/ · DOI 10.1016/j.cmet.2020.07.012
    Complete structured claim and evidence
  42. Metformin-treated participants with high blood glucose had higher circulating imidazole propionate in the observational comparison.

    Experimental context and source evidence
    evidence_access
    Primary full text
    experimental_model
    Human type 2 diabetes plasma comparison.
    limitations
    Confounding and reverse causation remain possible; no randomized metabolite or histidine intervention.
    nutrient_topic
    L-Histidine collection; species, compartment, exposure, co-substrates and manipulation remain explicit. · L-Histidine
    plain_language
    The human association is consistent with a hypothesis but does not test the mechanism.
    primary_references
    Microbial Imidazole Propionate Affects Responses to Metformin through p38γ-Dependent Inhibitory AMPK Phosphorylation. · 2020 · https://pubmed.ncbi.nlm.nih.gov/32783890/ · DOI 10.1016/j.cmet.2020.07.012

    L-Histidine: supply, catabolism, histamine, receptors and cross-nutrient mechanisms (2026-09-19) · lines 354–360

    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Human type 2 diabetes plasma comparison. · source_derived_draft · unverified_draft

    ## histidine-imp-human-metformin The human association is consistent with a hypothesis but does not test the mechanism. Metformin-treated participants with high blood glucose had higher circulating imidazole propionate in the observational comparison. Model: Human type 2 diabetes plasma comparison. Limitations: Confounding and reverse causation remain possible; no randomized metabolite or histidine intervention. Evidence access: Primary full text Microbial Imidazole Propionate Affects Responses to Metformin through p38γ-Dependent Inhibitory AMPK Phosphorylation. · 2020 · https://pubmed.ncbi.nlm.nih.gov/32783890/ · DOI 10.1016/j.cmet.2020.07.012
    Complete structured claim and evidence
  43. Slc15a4 loss disturbed mouse B-cell endolysosomal pH regulation and was associated with disrupted mTOR signaling and the IRF7/type-I-interferon circuit.

    Experimental context and source evidence
    availability_state
    machinery_impairment Imported condition classification; unverified.
    evidence_access
    Primary abstract
    experimental_model
    Mouse B-cell genetic experiments and lupus model.
    limitations
    v-ATPase integrity was proposed rather than definitively established as the sole cause. Histidine intake was not the manipulation.
    nutrient_topic
    L-Histidine collection; species, compartment, exposure, co-substrates and manipulation remain explicit. · L-Histidine
    plain_language
    Losing a transporter-associated system changed the local organelle environment and immune signaling.
    primary_references
    The histidine transporter SLC15A4 coordinates mTOR-dependent inflammatory responses and pathogenic antibody production. · 2014 · https://pubmed.ncbi.nlm.nih.gov/25238095/ · DOI 10.1016/j.immuni.2014.08.011
    trigger_kind
    machinery_impairment Imported condition classification; unverified.

    L-Histidine: supply, catabolism, histamine, receptors and cross-nutrient mechanisms (2026-09-19) · lines 362–368

    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Mouse B-cell genetic experiments and lupus model. · source_derived_draft · unverified_draft

    ## histidine-slc15a4-mouse-ph Losing a transporter-associated system changed the local organelle environment and immune signaling. Slc15a4 loss disturbed mouse B-cell endolysosomal pH regulation and was associated with disrupted mTOR signaling and the IRF7/type-I-interferon circuit. Model: Mouse B-cell genetic experiments and lupus model. Limitations: v-ATPase integrity was proposed rather than definitively established as the sole cause. Histidine intake was not the manipulation. Evidence access: Primary abstract The histidine transporter SLC15A4 coordinates mTOR-dependent inflammatory responses and pathogenic antibody production. · 2014 · https://pubmed.ncbi.nlm.nih.gov/25238095/ · DOI 10.1016/j.immuni.2014.08.011
    Complete structured claim and evidence
  44. Mouse experiments attributed TLR-triggered cytokine production to functional Slc15a4 transport and linked Slc15a4 loss with reduced pathogenic antibody production.

    Experimental context and source evidence
    availability_state
    machinery_impairment Imported condition classification; unverified.
    evidence_access
    Primary abstract
    experimental_model
    Mouse genetic/transport-function study.
    limitations
    Later human TASL-tethering experiments provide a scaffold bypass; this is not proof that dietary histidine controls autoimmunity.
    nutrient_topic
    L-Histidine collection; species, compartment, exposure, co-substrates and manipulation remain explicit. · L-Histidine
    plain_language
    The original model linked transporter function with the immune response.
    primary_references
    The histidine transporter SLC15A4 coordinates mTOR-dependent inflammatory responses and pathogenic antibody production. · 2014 · https://pubmed.ncbi.nlm.nih.gov/25238095/ · DOI 10.1016/j.immuni.2014.08.011
    trigger_kind
    machinery_impairment Imported condition classification; unverified.

    L-Histidine: supply, catabolism, histamine, receptors and cross-nutrient mechanisms (2026-09-19) · lines 370–376

    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Mouse genetic/transport-function study. · source_derived_draft · unverified_draft

    ## histidine-slc15a4-mouse-cytokines The original model linked transporter function with the immune response. Mouse experiments attributed TLR-triggered cytokine production to functional Slc15a4 transport and linked Slc15a4 loss with reduced pathogenic antibody production. Model: Mouse genetic/transport-function study. Limitations: Later human TASL-tethering experiments provide a scaffold bypass; this is not proof that dietary histidine controls autoimmunity. Evidence access: Primary abstract The histidine transporter SLC15A4 coordinates mTOR-dependent inflammatory responses and pathogenic antibody production. · 2014 · https://pubmed.ncbi.nlm.nih.gov/25238095/ · DOI 10.1016/j.immuni.2014.08.011
    Complete structured claim and evidence
  45. Human SLC15A4 interacted with TASL and was required for its endolysosomal localization and function in the tested cells.

    Experimental context and source evidence
    evidence_access
    Primary full text
    experimental_model
    Primary and transformed human immune cells; interaction mapping and mutagenesis.
    limitations
    Docking does not prove that the amount of histidine transported is the limiting signal.
    nutrient_topic
    L-Histidine collection; species, compartment, exposure, co-substrates and manipulation remain explicit. · L-Histidine
    plain_language
    The transporter also serves as a docking location for a signaling adaptor.
    primary_references
    TASL is the SLC15A4-associated adaptor for IRF5 activation by TLR7-9. · 2020 · https://pubmed.ncbi.nlm.nih.gov/32433612/ · DOI 10.1038/s41586-020-2282-0

    L-Histidine: supply, catabolism, histamine, receptors and cross-nutrient mechanisms (2026-09-19) · lines 378–384

    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Primary and transformed human immune cells; interaction mapping and mutagenesis. · source_derived_draft · unverified_draft

    ## histidine-tasl-recruitment The transporter also serves as a docking location for a signaling adaptor. Human SLC15A4 interacted with TASL and was required for its endolysosomal localization and function in the tested cells. Model: Primary and transformed human immune cells; interaction mapping and mutagenesis. Limitations: Docking does not prove that the amount of histidine transported is the limiting signal. Evidence access: Primary full text TASL is the SLC15A4-associated adaptor for IRF5 activation by TLR7-9. · 2020 · https://pubmed.ncbi.nlm.nih.gov/32433612/ · DOI 10.1038/s41586-020-2282-0
    Complete structured claim and evidence
  46. The conserved TASL pLxIS motif mediated recruitment and activation of IRF5 downstream of endolysosomal TLR7/8/9 stimulation.

    Experimental context and source evidence
    evidence_access
    Primary full text
    experimental_model
    Human immune-cell mutagenesis and signaling experiments.
    limitations
    A shared transporter node does not establish a nutritional intervention.
    nutrient_topic
    L-Histidine collection; species, compartment, exposure, co-substrates and manipulation remain explicit. · L-Histidine
    plain_language
    An adaptor connects the membrane-associated system to a transcription factor.
    primary_references
    TASL is the SLC15A4-associated adaptor for IRF5 activation by TLR7-9. · 2020 · https://pubmed.ncbi.nlm.nih.gov/32433612/ · DOI 10.1038/s41586-020-2282-0

    L-Histidine: supply, catabolism, histamine, receptors and cross-nutrient mechanisms (2026-09-19) · lines 386–392

    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Human immune-cell mutagenesis and signaling experiments. · source_derived_draft · unverified_draft

    ## histidine-tasl-irf5 An adaptor connects the membrane-associated system to a transcription factor. The conserved TASL pLxIS motif mediated recruitment and activation of IRF5 downstream of endolysosomal TLR7/8/9 stimulation. Model: Human immune-cell mutagenesis and signaling experiments. Limitations: A shared transporter node does not establish a nutritional intervention. Evidence access: Primary full text TASL is the SLC15A4-associated adaptor for IRF5 activation by TLR7-9. · 2020 · https://pubmed.ncbi.nlm.nih.gov/32433612/ · DOI 10.1038/s41586-020-2282-0
    Complete structured claim and evidence
  47. Deleting TASL or SLC15A4 impaired the IRF response without abolishing the measured NF-kappaB or MAPK responses.

    Experimental context and source evidence
    availability_state
    machinery_impairment Imported condition classification; unverified.
    evidence_access
    Primary full text
    experimental_model
    Human immune-cell deletion experiments.
    limitations
    Does not imply all immune function is lost or a global histidine shortage.
    nutrient_topic
    L-Histidine collection; species, compartment, exposure, co-substrates and manipulation remain explicit. · L-Histidine
    plain_language
    Loss of the system selectively disrupted one signaling branch.
    primary_references
    TASL is the SLC15A4-associated adaptor for IRF5 activation by TLR7-9. · 2020 · https://pubmed.ncbi.nlm.nih.gov/32433612/ · DOI 10.1038/s41586-020-2282-0
    trigger_kind
    machinery_impairment Imported condition classification; unverified.

    L-Histidine: supply, catabolism, histamine, receptors and cross-nutrient mechanisms (2026-09-19) · lines 394–400

    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Human immune-cell deletion experiments. · source_derived_draft · unverified_draft

    ## histidine-tasl-loss-selectivity Loss of the system selectively disrupted one signaling branch. Deleting TASL or SLC15A4 impaired the IRF response without abolishing the measured NF-kappaB or MAPK responses. Model: Human immune-cell deletion experiments. Limitations: Does not imply all immune function is lost or a global histidine shortage. Evidence access: Primary full text TASL is the SLC15A4-associated adaptor for IRF5 activation by TLR7-9. · 2020 · https://pubmed.ncbi.nlm.nih.gov/32433612/ · DOI 10.1038/s41586-020-2282-0
    Complete structured claim and evidence
  48. Artificially tethering TASL to endolysosomes restored TLR7-9-induced IRF5 activation and interferon/cytokine production in SLC15A4-deficient human cells.

    Experimental context and source evidence
    availability_state
    machinery_impairment Imported condition classification; unverified.
    evidence_access
    Primary abstract
    experimental_model
    Engineered human-cell localization/rescue experiments.
    limitations
    Shows transport is dispensable with this bypass; does not show native transport is irrelevant in every cell, or replicate mouse IRF7 experiments under identical conditions.
    nutrient_topic
    L-Histidine collection; species, compartment, exposure, co-substrates and manipulation remain explicit. · L-Histidine
    plain_language
    A targeted scaffold bypass restored signaling without the transporter.
    primary_references
    SLC15A4 controls endolysosomal TLR7-9 responses by recruiting the innate immune adaptor TASL. · 2023 · https://pubmed.ncbi.nlm.nih.gov/37527038/ · DOI 10.1016/j.celrep.2023.112916
    trigger_kind
    machinery_impairment Imported condition classification; unverified.

    L-Histidine: supply, catabolism, histamine, receptors and cross-nutrient mechanisms (2026-09-19) · lines 402–408

    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Engineered human-cell localization/rescue experiments. · source_derived_draft · unverified_draft

    ## histidine-tasl-bypass A targeted scaffold bypass restored signaling without the transporter. Artificially tethering TASL to endolysosomes restored TLR7-9-induced IRF5 activation and interferon/cytokine production in SLC15A4-deficient human cells. Model: Engineered human-cell localization/rescue experiments. Limitations: Shows transport is dispensable with this bypass; does not show native transport is irrelevant in every cell, or replicate mouse IRF7 experiments under identical conditions. Evidence access: Primary abstract SLC15A4 controls endolysosomal TLR7-9 responses by recruiting the innate immune adaptor TASL. · 2023 · https://pubmed.ncbi.nlm.nih.gov/37527038/ · DOI 10.1016/j.celrep.2023.112916
    Complete structured claim and evidence
  49. Adding L-histidine increased filaggrin monomer formation in the reported human keratinocyte/skin-equivalent experiments.

    L-Histidine → Human filaggrin / FLG source_derived_draftungraded
    Experimental context and source evidence
    evidence_access
    Primary full text
    experimental_model
    Human keratinocyte differentiation and skin-equivalent models.
    limitations
    Culture response does not prove all eczema reflects histidine shortage or that FLG null variants can be repaired; one author was a director of a patent-owning company.
    nutrient_topic
    L-Histidine collection; species, compartment, exposure, co-substrates and manipulation remain explicit. · L-Histidine
    plain_language
    More available substrate changed a skin-protein processing readout in culture.
    primary_references
    Feeding filaggrin: effects of l-histidine supplementation in atopic dermatitis. · 2017 · https://pubmed.ncbi.nlm.nih.gov/29042806/ · DOI 10.2147/CCID.S146760

    L-Histidine: supply, catabolism, histamine, receptors and cross-nutrient mechanisms (2026-09-19) · lines 410–416

    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Human keratinocyte differentiation and skin-equivalent models. · source_derived_draft · unverified_draft

    ## histidine-skin-flg-processing More available substrate changed a skin-protein processing readout in culture. Adding L-histidine increased filaggrin monomer formation in the reported human keratinocyte/skin-equivalent experiments. Model: Human keratinocyte differentiation and skin-equivalent models. Limitations: Culture response does not prove all eczema reflects histidine shortage or that FLG null variants can be repaired; one author was a director of a patent-owning company. Evidence access: Primary full text Feeding filaggrin: effects of l-histidine supplementation in atopic dermatitis. · 2017 · https://pubmed.ncbi.nlm.nih.gov/29042806/ · DOI 10.2147/CCID.S146760
    Complete structured claim and evidence
  50. Histidine supplementation improved the measured barrier readout in human skin-equivalent experiments.

    Experimental context and source evidence
    evidence_access
    Primary full text
    experimental_model
    Human skin-equivalent in-vitro assay.
    limitations
    Separate from oral clinical outcomes; no direct proof of the entire mediation chain in patients.
    nutrient_topic
    L-Histidine collection; species, compartment, exposure, co-substrates and manipulation remain explicit. · L-Histidine
    plain_language
    The culture study also measured a functional barrier outcome.
    primary_references
    Feeding filaggrin: effects of l-histidine supplementation in atopic dermatitis. · 2017 · https://pubmed.ncbi.nlm.nih.gov/29042806/ · DOI 10.2147/CCID.S146760

    L-Histidine: supply, catabolism, histamine, receptors and cross-nutrient mechanisms (2026-09-19) · lines 418–424

    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Human skin-equivalent in-vitro assay. · source_derived_draft · unverified_draft

    ## histidine-skin-barrier The culture study also measured a functional barrier outcome. Histidine supplementation improved the measured barrier readout in human skin-equivalent experiments. Model: Human skin-equivalent in-vitro assay. Limitations: Separate from oral clinical outcomes; no direct proof of the entire mediation chain in patients. Evidence access: Primary full text Feeding filaggrin: effects of l-histidine supplementation in atopic dermatitis. · 2017 · https://pubmed.ncbi.nlm.nih.gov/29042806/ · DOI 10.2147/CCID.S146760
    Complete structured claim and evidence
  51. A 24-adult randomized blinded crossover pilot reported lower SCORAD and POEM after four weeks of 4 g/day oral histidine, with no corresponding improvement on placebo.

    Experimental context and source evidence
    evidence_access
    Primary full text
    experimental_model
    Adult atopic-dermatitis pilot; 4 g histidine or erythritol daily, crossover after eight weeks.
    limitations
    Small pilot, carryover and generalizability limitations; patent/company interest disclosed. The culture mechanism was not proven to mediate the clinical change.
    nutrient_topic
    L-Histidine collection; species, compartment, exposure, co-substrates and manipulation remain explicit. · L-Histidine
    plain_language
    A small human study reported symptom-score improvement.
    primary_references
    Feeding filaggrin: effects of l-histidine supplementation in atopic dermatitis. · 2017 · https://pubmed.ncbi.nlm.nih.gov/29042806/ · DOI 10.2147/CCID.S146760

    L-Histidine: supply, catabolism, histamine, receptors and cross-nutrient mechanisms (2026-09-19) · lines 426–432

    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Adult atopic-dermatitis pilot; 4 g histidine or erythritol daily, crossover after eight weeks. · source_derived_draft · unverified_draft

    ## histidine-skin-pilot A small human study reported symptom-score improvement. A 24-adult randomized blinded crossover pilot reported lower SCORAD and POEM after four weeks of 4 g/day oral histidine, with no corresponding improvement on placebo. Model: Adult atopic-dermatitis pilot; 4 g histidine or erythritol daily, crossover after eight weeks. Limitations: Small pilot, carryover and generalizability limitations; patent/company interest disclosed. The culture mechanism was not proven to mediate the clinical change. Evidence access: Primary full text Feeding filaggrin: effects of l-histidine supplementation in atopic dermatitis. · 2017 · https://pubmed.ncbi.nlm.nih.gov/29042806/ · DOI 10.2147/CCID.S146760
    Complete structured claim and evidence
  52. UV exposure converted trans-urocanic-acid standard to cis isomer; UVB produced faster conversion than UVA under the tested conditions.

    trans-Urocanate → cis-Urocanate source_derived_draftungraded
    Experimental context and source evidence
    evidence_access
    Primary abstract
    experimental_model
    In-vitro standards plus analytical measurement of histidine and urocanate isomers in skin washes from eight volunteers.
    limitations
    Photochemistry in standards does not establish a clinical sunscreen effect from oral histidine.
    nutrient_topic
    L-Histidine collection; species, compartment, exposure, co-substrates and manipulation remain explicit. · L-Histidine
    plain_language
    Light changes the shape of a histidine-derived skin molecule.
    primary_references
    Determination of histidine and urocanic acid isomers in the human skin by high-performance capillary electrophoresis. · 2000 · https://pubmed.ncbi.nlm.nih.gov/11129077/ · DOI 10.1016/s0378-4347(00)00376-5

    L-Histidine: supply, catabolism, histamine, receptors and cross-nutrient mechanisms (2026-09-19) · lines 434–440

    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · In-vitro standards plus analytical measurement of histidine and urocanate isomers in skin washes from eight volunteers. · source_derived_draft · unverified_draft

    ## histidine-urocanate-uv Light changes the shape of a histidine-derived skin molecule. UV exposure converted trans-urocanic-acid standard to cis isomer; UVB produced faster conversion than UVA under the tested conditions. Model: In-vitro standards plus analytical measurement of histidine and urocanate isomers in skin washes from eight volunteers. Limitations: Photochemistry in standards does not establish a clinical sunscreen effect from oral histidine. Evidence access: Primary abstract Determination of histidine and urocanic acid isomers in the human skin by high-performance capillary electrophoresis. · 2000 · https://pubmed.ncbi.nlm.nih.gov/11129077/ · DOI 10.1016/s0378-4347(00)00376-5
    Complete structured claim and evidence
  53. Histidase-deficient Peruvian mice retained skin-surface pH similar to matched controls.

    Experimental context and source evidence
    availability_state
    machinery_impairment Imported condition classification; unverified.
    evidence_access
    Primary full text
    experimental_model
    Mouse histidase-deficiency comparison; surface pH measurement.
    limitations
    Does not negate urocanate chemistry or human skin-equivalent effects; distinct endpoint, species and manipulation.
    nutrient_topic
    L-Histidine collection; species, compartment, exposure, co-substrates and manipulation remain explicit. · L-Histidine
    plain_language
    Other systems could preserve skin acidity when this histidine-processing enzyme was absent.
    primary_references
    Is the filaggrin-histidine-urocanic acid pathway essential for stratum corneum acidification? · 2010 · https://pubmed.ncbi.nlm.nih.gov/20376063/ · DOI 10.1038/jid.2010.74
    trigger_kind
    machinery_impairment Imported condition classification; unverified.

    L-Histidine: supply, catabolism, histamine, receptors and cross-nutrient mechanisms (2026-09-19) · lines 442–448

    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Mouse histidase-deficiency comparison; surface pH measurement. · source_derived_draft · unverified_draft

    ## histidine-skin-ph-redundancy Other systems could preserve skin acidity when this histidine-processing enzyme was absent. Histidase-deficient Peruvian mice retained skin-surface pH similar to matched controls. Model: Mouse histidase-deficiency comparison; surface pH measurement. Limitations: Does not negate urocanate chemistry or human skin-equivalent effects; distinct endpoint, species and manipulation. Evidence access: Primary full text Is the filaggrin-histidine-urocanic acid pathway essential for stratum corneum acidification? · 2010 · https://pubmed.ncbi.nlm.nih.gov/20376063/ · DOI 10.1038/jid.2010.74
    Complete structured claim and evidence
  54. In a randomized blinded trial of 100 obese women with metabolic syndrome, 4 g/day histidine for 12 weeks reduced HOMA-IR relative to placebo among 92 completers.

    Experimental context and source evidence
    evidence_access
    Primary abstract
    experimental_model
    Women aged 33-51; 50 assigned per arm, 45 histidine and 47 placebo completed.
    limitations
    HOMA-IR is a surrogate; one population and duration. Separate adipocyte experiments do not prove the human mechanism; not a contradiction of isolated microbial-metabolite administration.
    nutrient_topic
    L-Histidine collection; species, compartment, exposure, co-substrates and manipulation remain explicit. · L-Histidine
    plain_language
    A human trial measured improved insulin-resistance-related outcomes in a selected group.
    primary_references
    Histidine supplementation improves insulin resistance through suppressed inflammation in obese women with the metabolic syndrome: a randomised controlled trial. · 2013 · https://pubmed.ncbi.nlm.nih.gov/23361591/ · DOI 10.1007/s00125-013-2839-7

    L-Histidine: supply, catabolism, histamine, receptors and cross-nutrient mechanisms (2026-09-19) · lines 450–456

    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Women aged 33-51; 50 assigned per arm, 45 histidine and 47 placebo completed. · source_derived_draft · unverified_draft

    ## histidine-metabolic-human-trial A human trial measured improved insulin-resistance-related outcomes in a selected group. In a randomized blinded trial of 100 obese women with metabolic syndrome, 4 g/day histidine for 12 weeks reduced HOMA-IR relative to placebo among 92 completers. Model: Women aged 33-51; 50 assigned per arm, 45 histidine and 47 placebo completed. Limitations: HOMA-IR is a surrogate; one population and duration. Separate adipocyte experiments do not prove the human mechanism; not a contradiction of isolated microbial-metabolite administration. Evidence access: Primary abstract Histidine supplementation improves insulin resistance through suppressed inflammation in obese women with the metabolic syndrome: a randomised controlled trial. · 2013 · https://pubmed.ncbi.nlm.nih.gov/23361591/ · DOI 10.1007/s00125-013-2839-7
    Complete structured claim and evidence
  55. HARS1 ligates histidine to its cognate tRNA for protein synthesis.

    Experimental context and source evidence
    evidence_access
    Primary full text
    experimental_model
    Established enzymatic role in a primary HARS variant study.
    limitations
    Background chemistry rather than a new dietary intervention.
    nutrient_topic
    L-Histidine collection; species, compartment, exposure, co-substrates and manipulation remain explicit. · L-Histidine
    plain_language
    A charging enzyme connects free histidine to the protein-building machinery.
    primary_references
    A loss-of-function variant in the human histidyl-tRNA synthetase (HARS) gene is neurotoxic in vivo. · 2013 · https://pubmed.ncbi.nlm.nih.gov/22930593/ · DOI 10.1002/humu.22210

    L-Histidine: supply, catabolism, histamine, receptors and cross-nutrient mechanisms (2026-09-19) · lines 458–464

    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Established enzymatic role in a primary HARS variant study. · source_derived_draft · unverified_draft

    ## histidine-hars-charging A charging enzyme connects free histidine to the protein-building machinery. HARS1 ligates histidine to its cognate tRNA for protein synthesis. Model: Established enzymatic role in a primary HARS variant study. Limitations: Background chemistry rather than a new dietary intervention. Evidence access: Primary full text A loss-of-function variant in the human histidyl-tRNA synthetase (HARS) gene is neurotoxic in vivo. · 2013 · https://pubmed.ncbi.nlm.nih.gov/22930593/ · DOI 10.1002/humu.22210
    Complete structured claim and evidence
  56. HARS1 Arg137Gln identified in a neuropathy screen showed loss of function in yeast complementation and neuronal toxicity in a worm expression model.

    Experimental context and source evidence
    availability_state
    machinery_impairment Imported condition classification; unverified.
    evidence_access
    Primary full text
    experimental_model
    Human variant discovery, orthologous yeast complementation and C. elegans functional assays.
    limitations
    The variant also occurred in additional sequenced people; functional findings do not establish penetrance or an effective histidine treatment.
    nutrient_topic
    L-Histidine collection; species, compartment, exposure, co-substrates and manipulation remain explicit. · L-Histidine
    plain_language
    A defective histidine-using enzyme can cause cellular problems that substrate alone has not been shown to fix.
    primary_references
    A loss-of-function variant in the human histidyl-tRNA synthetase (HARS) gene is neurotoxic in vivo. · 2013 · https://pubmed.ncbi.nlm.nih.gov/22930593/ · DOI 10.1002/humu.22210
    trigger_kind
    machinery_impairment Imported condition classification; unverified.

    L-Histidine: supply, catabolism, histamine, receptors and cross-nutrient mechanisms (2026-09-19) · lines 466–472

    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Human variant discovery, orthologous yeast complementation and C. elegans functional assays. · source_derived_draft · unverified_draft

    ## histidine-hars-variant A defective histidine-using enzyme can cause cellular problems that substrate alone has not been shown to fix. HARS1 Arg137Gln identified in a neuropathy screen showed loss of function in yeast complementation and neuronal toxicity in a worm expression model. Model: Human variant discovery, orthologous yeast complementation and C. elegans functional assays. Limitations: The variant also occurred in additional sequenced people; functional findings do not establish penetrance or an effective histidine treatment. Evidence access: Primary full text A loss-of-function variant in the human histidyl-tRNA synthetase (HARS) gene is neurotoxic in vivo. · 2013 · https://pubmed.ncbi.nlm.nih.gov/22930593/ · DOI 10.1002/humu.22210
    Complete structured claim and evidence
  57. HARS2 provides histidyl-tRNA for mitochondrial translation; L200V and V368L variants reduced aminoacylation in the study assays.

    Experimental context and source evidence
    availability_state
    machinery_impairment Imported condition classification; unverified.
    evidence_access
    Primary abstract
    experimental_model
    Human family study with recombinant activity, transcript analysis and yeast/worm experiments.
    limitations
    Background role and measured variant impairment are distinguished; direct respiratory-chain failure in every affected tissue is not established here.
    nutrient_topic
    L-Histidine collection; species, compartment, exposure, co-substrates and manipulation remain explicit. · L-Histidine
    plain_language
    Mitochondria have a separate histidine-charging requirement.
    primary_references
    Mutations in mitochondrial histidyl tRNA synthetase HARS2 cause ovarian dysgenesis and sensorineural hearing loss of Perrault syndrome. · 2011 · https://pubmed.ncbi.nlm.nih.gov/21464306/ · DOI 10.1073/pnas.1103471108
    trigger_kind
    machinery_impairment Imported condition classification; unverified.

    L-Histidine: supply, catabolism, histamine, receptors and cross-nutrient mechanisms (2026-09-19) · lines 474–480

    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Human family study with recombinant activity, transcript analysis and yeast/worm experiments. · source_derived_draft · unverified_draft

    ## histidine-hars2-charging Mitochondria have a separate histidine-charging requirement. HARS2 provides histidyl-tRNA for mitochondrial translation; L200V and V368L variants reduced aminoacylation in the study assays. Model: Human family study with recombinant activity, transcript analysis and yeast/worm experiments. Limitations: Background role and measured variant impairment are distinguished; direct respiratory-chain failure in every affected tissue is not established here. Evidence access: Primary abstract Mutations in mitochondrial histidyl tRNA synthetase HARS2 cause ovarian dysgenesis and sensorineural hearing loss of Perrault syndrome. · 2011 · https://pubmed.ncbi.nlm.nih.gov/21464306/ · DOI 10.1073/pnas.1103471108
    Complete structured claim and evidence
  58. The nucleotide change encoding HARS2 L200V also generated a transcript lacking 12 codons; the deletion product was not stably expressed in mammalian mitochondria.

    Experimental context and source evidence
    availability_state
    machinery_impairment Imported condition classification; unverified.
    evidence_access
    Primary abstract
    experimental_model
    Perrault-syndrome family, transcript analysis and expression assays.
    limitations
    A machinery defect is not evidence of dietary histidine deficiency.
    nutrient_topic
    L-Histidine collection; species, compartment, exposure, co-substrates and manipulation remain explicit. · L-Histidine
    plain_language
    One DNA change affected both the protein sequence and how its RNA was assembled.
    primary_references
    Mutations in mitochondrial histidyl tRNA synthetase HARS2 cause ovarian dysgenesis and sensorineural hearing loss of Perrault syndrome. · 2011 · https://pubmed.ncbi.nlm.nih.gov/21464306/ · DOI 10.1073/pnas.1103471108
    trigger_kind
    machinery_impairment Imported condition classification; unverified.

    L-Histidine: supply, catabolism, histamine, receptors and cross-nutrient mechanisms (2026-09-19) · lines 482–488

    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Perrault-syndrome family, transcript analysis and expression assays. · source_derived_draft · unverified_draft

    ## histidine-hars2-splicing One DNA change affected both the protein sequence and how its RNA was assembled. The nucleotide change encoding HARS2 L200V also generated a transcript lacking 12 codons; the deletion product was not stably expressed in mammalian mitochondria. Model: Perrault-syndrome family, transcript analysis and expression assays. Limitations: A machinery defect is not evidence of dietary histidine deficiency. Evidence access: Primary abstract Mutations in mitochondrial histidyl tRNA synthetase HARS2 cause ovarian dysgenesis and sensorineural hearing loss of Perrault syndrome. · 2011 · https://pubmed.ncbi.nlm.nih.gov/21464306/ · DOI 10.1073/pnas.1103471108
    Complete structured claim and evidence
  59. Recombinant human HDC catalyzes PLP-dependent histidine decarboxylation to histamine.

    Human histidine decarboxylase / HDC → Histamine source_derived_draftungraded
    Experimental context and source evidence
    experimental_model
    Recombinant engineered human HDC; crystallography and enzyme assays
    exposure
    Recombinant HDC enzyme-activity assays.
    limitations
    Engineered soluble HDC construct; histamine release and allergy outcomes were not tested.
    nutrient_topic
    Vitamin B6 research collection; topical membership is not evidence of a direct dietary effect. · Vitamin B6
    organism
    Homo sapiens
    plain_language
    Activated B6 supports histamine synthesis.
    primary_references
    [komori-2012-hdc] Structural Study Reveals That Ser-354 Determines Substrate Specificity on Human Histidine Decarboxylase (2012). https://pmc.ncbi.nlm.nih.gov/articles/PMC3436558/ DOI: 10.1074/jbc.M112.381897
    tissue_or_cell_type
    Purified recombinant protein; no intact tissue

    Vitamin B6: mechanisms, deficiency and nutrient interactions (2026-09-17) · lines 1047–1057

    AI-assisted literature curation; primary study URLs and scope retained in the document and extraction. Not publisher full text. · supports · Recombinant engineered human HDC; crystallography and enzyme assays · source_derived_draft · unverified_draft

    ### b6-neuro-hdc-histamine Recombinant human HDC catalyzes PLP-dependent histidine decarboxylation to histamine. Condition category: normal nutrient_topic: Vitamin B6 research collection; topical membership is not evidence of a direct dietary effect. plain_language: Activated B6 supports histamine synthesis. organism: Homo sapiens tissue_or_cell_type: Purified recombinant protein; no intact tissue experimental_model: Recombinant engineered human HDC; crystallography and enzyme assays limitations: Engineered soluble HDC construct; histamine release and allergy outcomes were not tested. exposure: Recombinant HDC enzyme-activity assays. [komori-2012-hdc] Structural Study Reveals That Ser-354 Determines Substrate Specificity on Human Histidine Decarboxylase (2012). https://pmc.ncbi.nlm.nih.gov/articles/PMC3436558/ DOI: 10.1074/jbc.M112.381897
    Complete structured claim and evidence
  60. The human HDC inhibitor complex resolved a PLP-histidine-methyl-ester external aldimine in its active site.

    Human histidine decarboxylase / HDC → PLP source_derived_draftungraded
    Experimental context and source evidence
    experimental_model
    Recombinant engineered human HDC; crystallography and enzyme assays
    exposure
    Histidine methyl ester co-crystallization.
    limitations
    Inhibitor-bound engineered protein; not direct observation of every physiological catalytic intermediate.
    nutrient_topic
    Vitamin B6 research collection; topical membership is not evidence of a direct dietary effect. · Vitamin B6
    organism
    Homo sapiens
    plain_language
    The structure shows how HDC holds a B6-bound substrate mimic.
    primary_references
    [komori-2012-hdc] Structural Study Reveals That Ser-354 Determines Substrate Specificity on Human Histidine Decarboxylase (2012). https://pmc.ncbi.nlm.nih.gov/articles/PMC3436558/ DOI: 10.1074/jbc.M112.381897
    tissue_or_cell_type
    Purified recombinant protein; no intact tissue

    Vitamin B6: mechanisms, deficiency and nutrient interactions (2026-09-17) · lines 1059–1069

    AI-assisted literature curation; primary study URLs and scope retained in the document and extraction. Not publisher full text. · supports · Recombinant engineered human HDC; crystallography and enzyme assays · source_derived_draft · unverified_draft

    ### b6-neuro-hdc-external-aldimine The human HDC inhibitor complex resolved a PLP-histidine-methyl-ester external aldimine in its active site. Condition category: normal nutrient_topic: Vitamin B6 research collection; topical membership is not evidence of a direct dietary effect. plain_language: The structure shows how HDC holds a B6-bound substrate mimic. organism: Homo sapiens tissue_or_cell_type: Purified recombinant protein; no intact tissue experimental_model: Recombinant engineered human HDC; crystallography and enzyme assays limitations: Inhibitor-bound engineered protein; not direct observation of every physiological catalytic intermediate. exposure: Histidine methyl ester co-crystallization. [komori-2012-hdc] Structural Study Reveals That Ser-354 Determines Substrate Specificity on Human Histidine Decarboxylase (2012). https://pmc.ncbi.nlm.nih.gov/articles/PMC3436558/ DOI: 10.1074/jbc.M112.381897
    Complete structured claim and evidence
  61. The FT activity of rat FTCD transfers the FIGLU formimino group to THF, yielding 5-formimino-THF and glutamate.

    Experimental context and source evidence
    cross_nutrient
    Histidine degradation supplies a folate-bound carbon group.
    evidence_location
    Introduction reaction definition; Figure 1 and FT-domain structural analysis.
    experimental_model
    Recombinant protein structure and functional analysis
    exposure
    Recombinant rat FTCD; FT-domain structural analysis.
    limitations
    Rat enzyme; no human histidine-loading response is inferred.
    nutrient_topic
    Folate and folic acid research collection; topical membership is not evidence of a direct dietary effect. · Folate (vitamin B9)
    organism
    Rattus norvegicus
    plain_language
    This step brings histidine-derived carbon into folate chemistry.
    primary_references
    [mao-2004] Structure of the bifunctional and Golgi-associated formiminotransferase cyclodeaminase octamer (2004). https://pubmed.ncbi.nlm.nih.gov/15272307/ DOI: 10.1038/sj.emboj.7600327
    tissue_or_cell_type
    Cell-free

    Folate and folic acid: mechanisms, deficiency and nutrient interactions (2026-09-17) · lines 1294–1306

    AI-assisted literature curation; primary study URLs and scope retained in the document and extraction. Not publisher full text. · supports · Recombinant protein structure and functional analysis · source_derived_draft · unverified_draft

    ### rat-ftcd-formimino-transfer The FT activity of rat FTCD transfers the FIGLU formimino group to THF, yielding 5-formimino-THF and glutamate. Condition category: normal nutrient_topic: Folate and folic acid research collection; topical membership is not evidence of a direct dietary effect. plain_language: This step brings histidine-derived carbon into folate chemistry. organism: Rattus norvegicus tissue_or_cell_type: Cell-free experimental_model: Recombinant protein structure and functional analysis limitations: Rat enzyme; no human histidine-loading response is inferred. exposure: Recombinant rat FTCD; FT-domain structural analysis. cross_nutrient: Histidine degradation supplies a folate-bound carbon group. evidence_location: Introduction reaction definition; Figure 1 and FT-domain structural analysis. [mao-2004] Structure of the bifunctional and Golgi-associated formiminotransferase cyclodeaminase octamer (2004). https://pubmed.ncbi.nlm.nih.gov/15272307/ DOI: 10.1038/sj.emboj.7600327
    Complete structured claim and evidence
  62. Adding histidine to the high-iron water solution attenuated inhibition, with zinc absorption of 47% compared with 34% at the high iron ratio without that ligand.

    L-Histidine → Intestinal zinc absorption source_derived_draftungraded
    Experimental context and source evidence
    cross_nutrient
    Ferrous iron (competing_ion); Zinc(II) ion (absorbed_ion)
    evidence_location
    Indexed primary abstract.
    evidence_span
    {"source_cache": "artifacts/zinc-clinical-sources/sandstrom1985.abstract.txt", "locator": "Primary indexed abstract; complete local file", "file_sha256": "aa462f6a961ec4190690f8def1be1f5e54491574698b131992161a989103ca76", "utf8_bytes": 1044}
    experimental_model
    Human 65Zn tracer study with whole-body counting after two weeks
    exposure
    Ferrous iron with ascorbic acid; Fe:Zn molar ratios 1:1, 2.5:1 and 25:1, in fasting water or a meal; histidine and iron-preloading comparisons.
    limitations
    Meal matrix, iron ratio and ligand differed. Absolute administered amounts and sample sizes were not verified in the indexed abstract; no universal spacing rule follows.
    nutrient_topic
    Zinc research collection; topical membership is not evidence of a direct dietary effect. · Zinc
    organism
    Homo sapiens
    plain_language
    A ligand changed the interaction between iron and zinc in this experiment.
    primary_references
    [zn-clin-sandstrom1985] Oral iron, dietary ligands and zinc absorption. (1985). https://pubmed.ncbi.nlm.nih.gov/3973750/ DOI: 10.1093/jn/115.3.411
    tissue_or_cell_type
    Intestinal absorption

    Zinc: transport, enzyme loading, deficiency and nutrient interactions (2026-09-17) · lines 1256–1269

    AI-assisted literature curation; primary study URLs and scope retained in the document and extraction. Not publisher full text. · supports · Human 65Zn tracer study with whole-body counting after two weeks · source_derived_draft · unverified_draft

    ### zn-clin-histidine-iron Adding histidine to the high-iron water solution attenuated inhibition, with zinc absorption of 47% compared with 34% at the high iron ratio without that ligand. Condition category: normal nutrient_topic: Zinc research collection; topical membership is not evidence of a direct dietary effect. plain_language: A ligand changed the interaction between iron and zinc in this experiment. organism: Homo sapiens tissue_or_cell_type: Intestinal absorption experimental_model: Human 65Zn tracer study with whole-body counting after two weeks limitations: Meal matrix, iron ratio and ligand differed. Absolute administered amounts and sample sizes were not verified in the indexed abstract; no universal spacing rule follows. exposure: Ferrous iron with ascorbic acid; Fe:Zn molar ratios 1:1, 2.5:1 and 25:1, in fasting water or a meal; histidine and iron-preloading comparisons. cross_nutrient: Ferrous iron (competing_ion); Zinc(II) ion (absorbed_ion) evidence_location: Indexed primary abstract. evidence_span: {"source_cache": "artifacts/zinc-clinical-sources/sandstrom1985.abstract.txt", "locator": "Primary indexed abstract; complete local file", "file_sha256": "aa462f6a961ec4190690f8def1be1f5e54491574698b131992161a989103ca76", "utf8_bytes": 1044} [zn-clin-sandstrom1985] Oral iron, dietary ligands and zinc absorption. (1985). https://pubmed.ncbi.nlm.nih.gov/3973750/ DOI: 10.1093/jn/115.3.411
    Complete structured claim and evidence
  63. Human diamine oxidase has a substrate pocket adapted to diamines including histamine, distinct from that of AOC3.

    Human diamine oxidase / AOC1 / DAO → Histamine source_derived_draftungraded
    Experimental context and source evidence
    evidence_span
    {"source_cache": "artifacts/copper-research/19764817.abstract.txt", "locator": "Exact primary indexed abstract; zero-based, end-exclusive Unicode character offsets", "file_sha256": "9a01d0dba5caec8a33a77fdbe7190d7a05bdd6e691a570a890eb6b19d4c692b6", "start_char": 0, "end_char": 1343, "text_sha256": "9a01d0dba5caec8a33a77fdbe7190d7a05bdd6e691a570a890eb6b19d4c692b6"}
    experimental_model
    Crystallography of recombinant human diamine oxidase and inhibitor complexes
    exposure
    Native structure and inhibitor binding
    limitations
    Copper/TPQ dependence is molecular evidence, not a trial of copper for histamine intolerance; DAO activity can have multiple determinants.
    nutrient_topic
    Copper research collection; topical membership is not evidence of a direct dietary effect. · Copper
    organism
    Human AOC1 expressed in insect cells
    plain_language
    Related copper enzymes process different amines.
    primary_references
    [copper-p19764817] Structure and inhibition of human diamine oxidase. (2009). https://pubmed.ncbi.nlm.nih.gov/19764817/ DOI: 10.1021/bi9014192
    tissue_or_cell_type
    Purified protein

    Copper: transport, cuproenzymes, deficiency, excess and nutrient interactions (2026-09-17) · lines 1027–1038

    AI-assisted literature curation; primary study URLs and scope retained in the document and extraction. Not publisher full text. · supports · Crystallography of recombinant human diamine oxidase and inhibitor complexes · source_derived_draft · unverified_draft

    ### copper-aoc1-histamine-specificity Human diamine oxidase has a substrate pocket adapted to diamines including histamine, distinct from that of AOC3. Condition category: normal nutrient_topic: Copper research collection; topical membership is not evidence of a direct dietary effect. plain_language: Related copper enzymes process different amines. organism: Human AOC1 expressed in insect cells tissue_or_cell_type: Purified protein experimental_model: Crystallography of recombinant human diamine oxidase and inhibitor complexes limitations: Copper/TPQ dependence is molecular evidence, not a trial of copper for histamine intolerance; DAO activity can have multiple determinants. exposure: Native structure and inhibitor binding evidence_span: {"source_cache": "artifacts/copper-research/19764817.abstract.txt", "locator": "Exact primary indexed abstract; zero-based, end-exclusive Unicode character offsets", "file_sha256": "9a01d0dba5caec8a33a77fdbe7190d7a05bdd6e691a570a890eb6b19d4c692b6", "start_char": 0, "end_char": 1343, "text_sha256": "9a01d0dba5caec8a33a77fdbe7190d7a05bdd6e691a570a890eb6b19d4c692b6"} [copper-p19764817] Structure and inhibition of human diamine oxidase. (2009). https://pubmed.ncbi.nlm.nih.gov/19764817/ DOI: 10.1021/bi9014192
    Complete structured claim and evidence
  64. Purified recombinant human CARNS1 joined beta-alanine and L-histidine to form carnosine in an ATP-containing assay.

    Experimental context and source evidence
    evidence_access
    Primary abstract and full-text enzyme methods
    experimental_model
    Human enzyme expressed in HEK293T cells.
    limitations
    An enzyme assay does not define dietary requirements.
    nutrient_topic
    Carnosine collection; isomer, preparation, species, exposure and manipulation remain explicit. · L-Carnosine / beta-alanyl-L-histidine
    plain_language
    Two building blocks are assembled by a specific enzyme.
    primary_references
    Molecular identification of carnosine synthase as ATP-grasp domain-containing protein 1 (ATPGD1). · 2010 · https://pubmed.ncbi.nlm.nih.gov/20097752/ · DOI 10.1074/jbc.M109.095505

    Carnosine: synthesis, transport, carbonyl chemistry and nutrient interactions (2026-09-19) · lines 20–26

    AI-assisted research curation; primary-abstract references and experimental limitations individually identified. Not publisher full text. · supports · Human enzyme expressed in HEK293T cells. · source_derived_draft · unverified_draft

    ## carnosine-synthesis Two building blocks are assembled by a specific enzyme. Purified recombinant human CARNS1 joined beta-alanine and L-histidine to form carnosine in an ATP-containing assay. Model: Human enzyme expressed in HEK293T cells. Limitations: An enzyme assay does not define dietary requirements. Evidence access: Primary abstract and full-text enzyme methods Molecular identification of carnosine synthase as ATP-grasp domain-containing protein 1 (ATPGD1). · 2010 · https://pubmed.ncbi.nlm.nih.gov/20097752/ · DOI 10.1074/jbc.M109.095505
    Complete structured claim and evidence
  65. Beta-alanine alone or with histidine increased muscle carnosine; histidine alone did not, and the combined group did not exceed beta-alanine alone.

    Beta-alanine → Human skeletal-muscle carnosine content source_derived_draftungraded
    Experimental context and source evidence
    evidence_access
    Primary abstract
    experimental_model
    Thirty adults; 23 days; BA 6 g/day, histidine 3.5 g/day or both.
    limitations
    Study exposures, not personal dosing guidance.
    nutrient_topic
    Carnosine collection; isomer, preparation, species, exposure and manipulation remain explicit. · L-Carnosine / beta-alanyl-L-histidine
    plain_language
    More of one precursor helped; adding the other did not further raise carnosine.
    primary_references
    Effects of Histidine and β-alanine Supplementation on Human Muscle Carnosine Storage. · 2017 · https://pubmed.ncbi.nlm.nih.gov/28106620/ · DOI 10.1249/MSS.0000000000001213

    Carnosine: synthesis, transport, carbonyl chemistry and nutrient interactions (2026-09-19) · lines 108–114

    AI-assisted research curation; primary-abstract references and experimental limitations individually identified. Not publisher full text. · supports · Thirty adults; 23 days; BA 6 g/day, histidine 3.5 g/day or both. · source_derived_draft · unverified_draft

    ## carnosine-histidine-loading More of one precursor helped; adding the other did not further raise carnosine. Beta-alanine alone or with histidine increased muscle carnosine; histidine alone did not, and the combined group did not exceed beta-alanine alone. Model: Thirty adults; 23 days; BA 6 g/day, histidine 3.5 g/day or both. Limitations: Study exposures, not personal dosing guidance. Evidence access: Primary abstract Effects of Histidine and β-alanine Supplementation on Human Muscle Carnosine Storage. · 2017 · https://pubmed.ncbi.nlm.nih.gov/28106620/ · DOI 10.1249/MSS.0000000000001213
    Complete structured claim and evidence
  66. Beta-alanine supplementation lowered free histidine in muscle by 31.6% and plasma by 30.6%; simultaneous histidine prevented these declines.

    Experimental context and source evidence
    evidence_access
    Primary abstract
    experimental_model
    Same 23-day study.
    limitations
    Physiological consequences of the declines were not established.
    nutrient_topic
    Carnosine collection; isomer, preparation, species, exposure and manipulation remain explicit. · L-Carnosine / beta-alanyl-L-histidine
    plain_language
    Making more carnosine can draw on another amino-acid pool.
    primary_references
    Effects of Histidine and β-alanine Supplementation on Human Muscle Carnosine Storage. · 2017 · https://pubmed.ncbi.nlm.nih.gov/28106620/ · DOI 10.1249/MSS.0000000000001213

    Carnosine: synthesis, transport, carbonyl chemistry and nutrient interactions (2026-09-19) · lines 116–122

    AI-assisted research curation; primary-abstract references and experimental limitations individually identified. Not publisher full text. · supports · Same 23-day study. · source_derived_draft · unverified_draft

    ## carnosine-histidine-cost Making more carnosine can draw on another amino-acid pool. Beta-alanine supplementation lowered free histidine in muscle by 31.6% and plasma by 30.6%; simultaneous histidine prevented these declines. Model: Same 23-day study. Limitations: Physiological consequences of the declines were not established. Evidence access: Primary abstract Effects of Histidine and β-alanine Supplementation on Human Muscle Carnosine Storage. · 2017 · https://pubmed.ncbi.nlm.nih.gov/28106620/ · DOI 10.1249/MSS.0000000000001213
    Complete structured claim and evidence
  67. At pH 7.4, intact carnosine quenched HNE more effectively than histidine or N-acetylcarnosine, while beta-alanine was inactive.

    Experimental context and source evidence
    evidence_access
    Primary abstract
    experimental_model
    Cell-free comparison.
    limitations
    This molecular comparison is not proof of supplement synergy.
    nutrient_topic
    Carnosine collection; isomer, preparation, species, exposure and manipulation remain explicit. · L-Carnosine / beta-alanyl-L-histidine
    plain_language
    The joined peptide has properties its separate parts do not reproduce.
    primary_references
    Carnosine is a quencher of 4-hydroxy-nonenal: through what mechanism of reaction? · 2002 · https://pubmed.ncbi.nlm.nih.gov/12419310/ · DOI 10.1016/s0006-291x(02)02545-7

    Carnosine: synthesis, transport, carbonyl chemistry and nutrient interactions (2026-09-19) · lines 244–250

    AI-assisted research curation; primary-abstract references and experimental limitations individually identified. Not publisher full text. · supports · Cell-free comparison. · source_derived_draft · unverified_draft

    ## carnosine-hne-intact-peptide The joined peptide has properties its separate parts do not reproduce. At pH 7.4, intact carnosine quenched HNE more effectively than histidine or N-acetylcarnosine, while beta-alanine was inactive. Model: Cell-free comparison. Limitations: This molecular comparison is not proof of supplement synergy. Evidence access: Primary abstract Carnosine is a quencher of 4-hydroxy-nonenal: through what mechanism of reaction? · 2002 · https://pubmed.ncbi.nlm.nih.gov/12419310/ · DOI 10.1016/s0006-291x(02)02545-7
    Complete structured claim and evidence
  68. Histidine increased DNA damage in the tested iron/peroxide/ascorbate system and weakened carnosine protection when combined with it.

    Experimental context and source evidence
    evidence_access
    Primary abstract
    experimental_model
    Cell-free 10 mM amino-acid comparison.
    limitations
    Not evidence that dietary histidine damages human DNA.
    nutrient_topic
    Carnosine collection; isomer, preparation, species, exposure and manipulation remain explicit. · L-Carnosine / beta-alanyl-L-histidine
    plain_language
    The breakdown product did not behave like the intact peptide.
    primary_references
    Antioxidant properties of carnosine re-evaluated with oxidizing systems involving iron and copper ions. · 2005 · https://pubmed.ncbi.nlm.nih.gov/15853927/ · DOI 10.1111/j.1742-7843.2005.pto_03.x

    Carnosine: synthesis, transport, carbonyl chemistry and nutrient interactions (2026-09-19) · lines 316–322

    AI-assisted research curation; primary-abstract references and experimental limitations individually identified. Not publisher full text. · supports · Cell-free 10 mM amino-acid comparison. · source_derived_draft · unverified_draft

    ## carnosine-histidine-metal The breakdown product did not behave like the intact peptide. Histidine increased DNA damage in the tested iron/peroxide/ascorbate system and weakened carnosine protection when combined with it. Model: Cell-free 10 mM amino-acid comparison. Limitations: Not evidence that dietary histidine damages human DNA. Evidence access: Primary abstract Antioxidant properties of carnosine re-evaluated with oxidizing systems involving iron and copper ions. · 2005 · https://pubmed.ncbi.nlm.nih.gov/15853927/ · DOI 10.1111/j.1742-7843.2005.pto_03.x
    Complete structured claim and evidence
  69. Carns1 deletion made histidine-containing dipeptides undetectable in the primary olfactory system and skeletal muscle.

    Experimental context and source evidence
    availability_state
    machinery_impairment Imported condition classification; unverified.
    evidence_access
    Primary abstract
    experimental_model
    Genetic mouse knockout.
    limitations
    Machinery failure, not a human dietary-deficiency syndrome.
    nutrient_topic
    Carnosine collection; isomer, preparation, species, exposure and manipulation remain explicit. · L-Carnosine / beta-alanyl-L-histidine
    plain_language
    Removing synthesis emptied the measured peptide pools.
    primary_references
    Carnosine synthase deficiency is compatible with normal skeletal muscle and olfactory function but causes reduced olfactory sensitivity in aging mice. · 2020 · https://pubmed.ncbi.nlm.nih.gov/33040025/ · DOI 10.1074/jbc.RA120.014188
    trigger_kind
    machinery_impairment Imported condition classification; unverified.

    Carnosine: synthesis, transport, carbonyl chemistry and nutrient interactions (2026-09-19) · lines 396–402

    AI-assisted research curation; primary-abstract references and experimental limitations individually identified. Not publisher full text. · supports · Genetic mouse knockout. · source_derived_draft · unverified_draft

    ## carnosine-mouse-loss Removing synthesis emptied the measured peptide pools. Carns1 deletion made histidine-containing dipeptides undetectable in the primary olfactory system and skeletal muscle. Model: Genetic mouse knockout. Limitations: Machinery failure, not a human dietary-deficiency syndrome. Evidence access: Primary abstract Carnosine synthase deficiency is compatible with normal skeletal muscle and olfactory function but causes reduced olfactory sensitivity in aging mice. · 2020 · https://pubmed.ncbi.nlm.nih.gov/33040025/ · DOI 10.1074/jbc.RA120.014188
    Complete structured claim and evidence
  70. Carns1 deletion eliminated histidine dipeptides and produced lower cardiomyocyte calcium peaks with slower calcium removal.

    Experimental context and source evidence
    availability_state
    machinery_impairment Imported condition classification; unverified.
    evidence_access
    Primary abstract
    experimental_model
    Four-month-old male knockout rats.
    limitations
    Loss affects carnosine and anserine; cannot assign all effects to one peptide.
    nutrient_topic
    Carnosine collection; isomer, preparation, species, exposure and manipulation remain explicit. · L-Carnosine / beta-alanyl-L-histidine
    plain_language
    Heart calcium handling changed when synthesis was absent.
    primary_references
    Histidine dipeptides are key regulators of excitation-contraction coupling in cardiac muscle: Evidence from a novel CARNS1 knockout rat model. · 2021 · https://pubmed.ncbi.nlm.nih.gov/34038814/ · DOI 10.1016/j.redox.2021.102016
    trigger_kind
    machinery_impairment Imported condition classification; unverified.

    Carnosine: synthesis, transport, carbonyl chemistry and nutrient interactions (2026-09-19) · lines 436–442

    AI-assisted research curation; primary-abstract references and experimental limitations individually identified. Not publisher full text. · supports · Four-month-old male knockout rats. · source_derived_draft · unverified_draft

    ## carnosine-rat-calcium Heart calcium handling changed when synthesis was absent. Carns1 deletion eliminated histidine dipeptides and produced lower cardiomyocyte calcium peaks with slower calcium removal. Model: Four-month-old male knockout rats. Limitations: Loss affects carnosine and anserine; cannot assign all effects to one peptide. Evidence access: Primary abstract Histidine dipeptides are key regulators of excitation-contraction coupling in cardiac muscle: Evidence from a novel CARNS1 knockout rat model. · 2021 · https://pubmed.ncbi.nlm.nih.gov/34038814/ · DOI 10.1016/j.redox.2021.102016
    Complete structured claim and evidence
  71. Carnosine treatment reduced infarct size in both wild-type and histidine-decarboxylase-null mice after permanent MCAO.

    Experimental context and source evidence
    evidence_access
    Primary abstract
    experimental_model
    Mouse cerebral ischemia with Hdc knockout.
    limitations
    Preclinical intervention; not stroke treatment guidance.
    nutrient_topic
    Carnosine collection; isomer, preparation, species, exposure and manipulation remain explicit. · L-Carnosine / beta-alanyl-L-histidine
    plain_language
    Protection in this model did not require histamine synthesis.
    primary_references
    Carnosine protects against permanent cerebral ischemia in histidine decarboxylase knockout mice by reducing glutamate excitotoxicity. · 2010 · https://pubmed.ncbi.nlm.nih.gov/20043985/ · DOI 10.1016/j.freeradbiomed.2009.12.021

    Carnosine: synthesis, transport, carbonyl chemistry and nutrient interactions (2026-09-19) · lines 460–466

    AI-assisted research curation; primary-abstract references and experimental limitations individually identified. Not publisher full text. · supports · Mouse cerebral ischemia with Hdc knockout. · source_derived_draft · unverified_draft

    ## carnosine-ischemia-hdc Protection in this model did not require histamine synthesis. Carnosine treatment reduced infarct size in both wild-type and histidine-decarboxylase-null mice after permanent MCAO. Model: Mouse cerebral ischemia with Hdc knockout. Limitations: Preclinical intervention; not stroke treatment guidance. Evidence access: Primary abstract Carnosine protects against permanent cerebral ischemia in histidine decarboxylase knockout mice by reducing glutamate excitotoxicity. · 2010 · https://pubmed.ncbi.nlm.nih.gov/20043985/ · DOI 10.1016/j.freeradbiomed.2009.12.021
    Complete structured claim and evidence
  72. Mycobacterium smegmatis EgtD uses SAM-dependent methyl transfer to convert histidine into hercynine.

    S-Adenosyl-L-methionine → Mycobacterium smegmatis EgtD source_derived_draftungraded
    Experimental context and source evidence
    evidence_access
    Primary abstract
    experimental_model
    Apo and ligand-bound enzyme structures.
    limitations
    No evidence that human ergothioneine consumption drains SAM; humans lack this established synthesis pathway.
    nutrient_topic
    Ergothioneine collection; molecular form, preparation, species, exposure and manipulation remain explicit. · L-Ergothioneine
    plain_language
    The microbial synthesis branch connects to methyl-donor chemistry.
    primary_references
    Structural insights into the histidine trimethylation activity of EgtD from Mycobacterium smegmatis. · 2014 · https://pubmed.ncbi.nlm.nih.gov/25251321/ · DOI 10.1016/j.bbrc.2014.09.058

    Ergothioneine: transport, redox chemistry and cross-nutrient mechanisms (2026-09-19) · lines 552–558

    AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · supports · Apo and ligand-bound enzyme structures. · source_derived_draft · unverified_draft

    ## ergothioneine-egtd-sam The microbial synthesis branch connects to methyl-donor chemistry. Mycobacterium smegmatis EgtD uses SAM-dependent methyl transfer to convert histidine into hercynine. Model: Apo and ligand-bound enzyme structures. Limitations: No evidence that human ergothioneine consumption drains SAM; humans lack this established synthesis pathway. Evidence access: Primary abstract Structural insights into the histidine trimethylation activity of EgtD from Mycobacterium smegmatis. · 2014 · https://pubmed.ncbi.nlm.nih.gov/25251321/ · DOI 10.1016/j.bbrc.2014.09.058
    Complete structured claim and evidence
  73. Elevated zinc stimulated human ZIP4 ubiquitination and degradation; a cytoplasmic histidine-rich region was required for this degradation response but dispensable for zinc-induced endocytosis.

    Zinc(II) ion → ZIP4 protein degradation source_derived_draftungraded
    Experimental context and source evidence
    cross_nutrient
    false
    experimental_model
    Cultured cells expressing human ZIP4 with mutational analysis
    exposure
    Elevated zinc exposure; detailed concentration and cell lineage not specified in the abstract.
    limitations
    Abstract extraction; the region requirement does not mean every histidine acts as an independent sensor. This is zinc exposure, not demonstrated dietary deficiency.
    nutrient_topic
    Zinc research collection; topical membership is not evidence of a direct dietary effect. · Zinc
    organism
    Human protein in cultured cells
    plain_language
    Human ZIP4 has a zinc-triggered disposal response that is separate from removal from the surface.
    primary_references
    [zinc-trans-17202136] A histidine-rich cluster mediates the ubiquitination and degradation of the human zinc transporter, hZIP4, and protects against zinc cytotoxicity. (2007). https://pubmed.ncbi.nlm.nih.gov/17202136/ DOI: 10.1074/jbc.m610552200
    tissue_or_cell_type
    Cellular zinc-uptake machinery

    Zinc: transport, enzyme loading, deficiency and nutrient interactions (2026-09-17) · lines 258–269

    AI-assisted literature curation; primary study URLs and scope retained in the document and extraction. Not publisher full text. · supports · Cultured cells expressing human ZIP4 with mutational analysis · source_derived_draft · unverified_draft

    ### zinc-trans-hzip4-degradation Elevated zinc stimulated human ZIP4 ubiquitination and degradation; a cytoplasmic histidine-rich region was required for this degradation response but dispensable for zinc-induced endocytosis. Condition category: normal nutrient_topic: Zinc research collection; topical membership is not evidence of a direct dietary effect. plain_language: Human ZIP4 has a zinc-triggered disposal response that is separate from removal from the surface. organism: Human protein in cultured cells tissue_or_cell_type: Cellular zinc-uptake machinery experimental_model: Cultured cells expressing human ZIP4 with mutational analysis limitations: Abstract extraction; the region requirement does not mean every histidine acts as an independent sensor. This is zinc exposure, not demonstrated dietary deficiency. exposure: Elevated zinc exposure; detailed concentration and cell lineage not specified in the abstract. cross_nutrient: false [zinc-trans-17202136] A histidine-rich cluster mediates the ubiquitination and degradation of the human zinc transporter, hZIP4, and protects against zinc cytotoxicity. (2007). https://pubmed.ncbi.nlm.nih.gov/17202136/ DOI: 10.1074/jbc.m610552200
    Complete structured claim and evidence
  74. X-ray absorption analysis of human CA2 supported a zinc site with three histidine nitrogen ligands and most likely one water/hydroxide oxygen ligand in both isolated and reconstituted enzyme.

    Zinc(II) ion → Human carbonic anhydrase II / CA2 source_derived_draftungraded
    Experimental context and source evidence
    cross_nutrient
    false
    experimental_model
    Purified recombinant human CA2; metal reconstitution, ITC and X-ray absorption spectroscopy
    exposure
    Zn K-edge XANES and EXAFS on isolated and zinc-reconstituted recombinant CA2.
    limitations
    Coordination assignment is spectroscopic; the oxygen ligand is most likely solvent-derived, not an independently measured dietary effect.
    nutrient_topic
    Zinc research collection; topical membership is not evidence of a direct dietary effect. · Zinc
    organism
    Homo sapiens
    plain_language
    CA2 holds zinc with three histidines and a water-derived ligand at its active site.
    primary_references
    [zinc-enz-ca2-coordination2012] Revisiting zinc coordination in human carbonic anhydrase II. (2012). https://pubmed.ncbi.nlm.nih.gov/23030313/ DOI: 10.1021/ic301645j
    tissue_or_cell_type
    Purified protein; cell-free assay

    Zinc: transport, enzyme loading, deficiency and nutrient interactions (2026-09-17) · lines 651–662

    AI-assisted literature curation; primary study URLs and scope retained in the document and extraction. Not publisher full text. · supports · Purified recombinant human CA2; metal reconstitution, ITC and X-ray absorption spectroscopy · source_derived_draft · unverified_draft

    ### zinc-enz-ca2-coordination X-ray absorption analysis of human CA2 supported a zinc site with three histidine nitrogen ligands and most likely one water/hydroxide oxygen ligand in both isolated and reconstituted enzyme. Condition category: normal nutrient_topic: Zinc research collection; topical membership is not evidence of a direct dietary effect. plain_language: CA2 holds zinc with three histidines and a water-derived ligand at its active site. organism: Homo sapiens tissue_or_cell_type: Purified protein; cell-free assay experimental_model: Purified recombinant human CA2; metal reconstitution, ITC and X-ray absorption spectroscopy limitations: Coordination assignment is spectroscopic; the oxygen ligand is most likely solvent-derived, not an independently measured dietary effect. exposure: Zn K-edge XANES and EXAFS on isolated and zinc-reconstituted recombinant CA2. cross_nutrient: false [zinc-enz-ca2-coordination2012] Revisiting zinc coordination in human carbonic anhydrase II. (2012). https://pubmed.ncbi.nlm.nih.gov/23030313/ DOI: 10.1021/ic301645j
    Complete structured claim and evidence
  75. Oxyhemoglobin structures resolved hydrogen bonding between the oxygen ligand and distal histidine in both alpha and beta subunits.

    Experimental context and source evidence
    evidence_span
    {"source_cache": "artifacts/iron-research/16765986.abstract.txt", "locator": "Exact primary indexed abstract; zero-based, end-exclusive Unicode character offsets", "file_sha256": "177ab81c08f82c99c81c69d1cb582e52216234e290066ae5aa380a887fb0e38c", "start_char": 0, "end_char": 1284, "text_sha256": "177ab81c08f82c99c81c69d1cb582e52216234e290066ae5aa380a887fb0e38c"}
    experimental_model
    High-resolution crystallographic comparison
    exposure
    1.25 angstrom structural refinement
    limitations
    Structural oxygen-ligand geometry, not a supplementation or oxygen-delivery clinical trial.
    nutrient_topic
    Iron research collection; topical membership is not evidence of a direct dietary effect. · Iron
    organism
    Human hemoglobin A
    plain_language
    Hemoglobin holds oxygen at carefully organized heme sites so oxygen binding can be controlled.
    primary_references
    [iron-p16765986] 1.25 A resolution crystal structures of human haemoglobin in the oxy, deoxy and carbonmonoxy forms. (2006). https://pubmed.ncbi.nlm.nih.gov/16765986/ DOI: 10.1016/j.jmb.2006.05.036
    tissue_or_cell_type
    Purified oxy-, deoxy- and carbonmonoxyhemoglobin

    Iron: absorption, trafficking, iron-dependent enzymes and nutrient interactions (2026-09-17) · lines 537–548

    AI-assisted literature curation; primary study URLs and scope retained in the document and extraction. Not publisher full text. · supports · High-resolution crystallographic comparison · source_derived_draft · unverified_draft

    ### iron-hemoglobin-oxygen-site Oxyhemoglobin structures resolved hydrogen bonding between the oxygen ligand and distal histidine in both alpha and beta subunits. Condition category: normal nutrient_topic: Iron research collection; topical membership is not evidence of a direct dietary effect. plain_language: Hemoglobin holds oxygen at carefully organized heme sites so oxygen binding can be controlled. organism: Human hemoglobin A tissue_or_cell_type: Purified oxy-, deoxy- and carbonmonoxyhemoglobin experimental_model: High-resolution crystallographic comparison limitations: Structural oxygen-ligand geometry, not a supplementation or oxygen-delivery clinical trial. exposure: 1.25 angstrom structural refinement evidence_span: {"source_cache": "artifacts/iron-research/16765986.abstract.txt", "locator": "Exact primary indexed abstract; zero-based, end-exclusive Unicode character offsets", "file_sha256": "177ab81c08f82c99c81c69d1cb582e52216234e290066ae5aa380a887fb0e38c", "start_char": 0, "end_char": 1284, "text_sha256": "177ab81c08f82c99c81c69d1cb582e52216234e290066ae5aa380a887fb0e38c"} [iron-p16765986] 1.25 A resolution crystal structures of human haemoglobin in the oxy, deoxy and carbonmonoxy forms. (2006). https://pubmed.ncbi.nlm.nih.gov/16765986/ DOI: 10.1016/j.jmb.2006.05.036
    Complete structured claim and evidence
  76. CARNMT1 methylated histidine-containing C3H zinc-finger substrates including U2AF1; cellular mass spectrometry supported these modifications.

    Experimental context and source evidence
    evidence_access
    Primary abstract
    experimental_model
    Human cellular extracts, recombinant-enzyme assays and mass spectrometry.
    limitations
    This does not show that carnosine supplements alter RNA processing.
    nutrient_topic
    Carnosine collection; isomer, preparation, species, exposure and manipulation remain explicit. · L-Carnosine / beta-alanyl-L-histidine
    plain_language
    The carnosine methylating enzyme also acts on proteins.
    primary_references
    Identification of substrates and sequence requirements for CARNMT1-mediated histidine methylation of C3H zinc fingers. · 2025 · https://pubmed.ncbi.nlm.nih.gov/40473212/ · DOI 10.1016/j.jbc.2025.110335

    Carnosine: synthesis, transport, carbonyl chemistry and nutrient interactions (2026-09-19) · lines 156–162

    AI-assisted research curation; primary-abstract references and experimental limitations individually identified. Not publisher full text. · supports · Human cellular extracts, recombinant-enzyme assays and mass spectrometry. · source_derived_draft · unverified_draft

    ## carnosine-carnmt1-protein The carnosine methylating enzyme also acts on proteins. CARNMT1 methylated histidine-containing C3H zinc-finger substrates including U2AF1; cellular mass spectrometry supported these modifications. Model: Human cellular extracts, recombinant-enzyme assays and mass spectrometry. Limitations: This does not show that carnosine supplements alter RNA processing. Evidence access: Primary abstract Identification of substrates and sequence requirements for CARNMT1-mediated histidine methylation of C3H zinc fingers. · 2025 · https://pubmed.ncbi.nlm.nih.gov/40473212/ · DOI 10.1016/j.jbc.2025.110335
    Complete structured claim and evidence
  77. Substrate profiling identified RNF113A as a CARNMT1 histidine-methylation target.

    Experimental context and source evidence
    evidence_access
    Primary abstract
    experimental_model
    Peptide-array and cellular methylation profiling.
    limitations
    Zinc-finger identity does not establish regulation by zinc intake.
    nutrient_topic
    Carnosine collection; isomer, preparation, species, exposure and manipulation remain explicit. · L-Carnosine / beta-alanyl-L-histidine
    plain_language
    A shared enzyme creates another testable connection.
    primary_references
    Identification of substrates and sequence requirements for CARNMT1-mediated histidine methylation of C3H zinc fingers. · 2025 · https://pubmed.ncbi.nlm.nih.gov/40473212/ · DOI 10.1016/j.jbc.2025.110335

    Carnosine: synthesis, transport, carbonyl chemistry and nutrient interactions (2026-09-19) · lines 164–170

    AI-assisted research curation; primary-abstract references and experimental limitations individually identified. Not publisher full text. · supports · Peptide-array and cellular methylation profiling. · source_derived_draft · unverified_draft

    ## carnosine-carnmt1-new-target A shared enzyme creates another testable connection. Substrate profiling identified RNF113A as a CARNMT1 histidine-methylation target. Model: Peptide-array and cellular methylation profiling. Limitations: Zinc-finger identity does not establish regulation by zinc intake. Evidence access: Primary abstract Identification of substrates and sequence requirements for CARNMT1-mediated histidine methylation of C3H zinc fingers. · 2025 · https://pubmed.ncbi.nlm.nih.gov/40473212/ · DOI 10.1016/j.jbc.2025.110335
    Complete structured claim and evidence
  78. Human AOC1 has one copper ion and a tyrosine-derived topaquinone in each of its two active sites.

    Experimental context and source evidence
    evidence_span
    {"source_cache": "artifacts/copper-research/19764817.abstract.txt", "locator": "Exact primary indexed abstract; zero-based, end-exclusive Unicode character offsets", "file_sha256": "9a01d0dba5caec8a33a77fdbe7190d7a05bdd6e691a570a890eb6b19d4c692b6", "start_char": 0, "end_char": 1343, "text_sha256": "9a01d0dba5caec8a33a77fdbe7190d7a05bdd6e691a570a890eb6b19d4c692b6"}
    experimental_model
    Crystallography of recombinant human diamine oxidase and inhibitor complexes
    exposure
    Native structure and inhibitor binding
    limitations
    Copper/TPQ dependence is molecular evidence, not a trial of copper for histamine intolerance; DAO activity can have multiple determinants.
    nutrient_topic
    Copper research collection; topical membership is not evidence of a direct dietary effect. · Copper
    organism
    Human AOC1 expressed in insect cells
    plain_language
    Histamine-processing machinery includes both a metal and a protein-derived cofactor.
    primary_references
    [copper-p19764817] Structure and inhibition of human diamine oxidase. (2009). https://pubmed.ncbi.nlm.nih.gov/19764817/ DOI: 10.1021/bi9014192
    tissue_or_cell_type
    Purified protein

    Copper: transport, cuproenzymes, deficiency, excess and nutrient interactions (2026-09-17) · lines 1014–1025

    AI-assisted literature curation; primary study URLs and scope retained in the document and extraction. Not publisher full text. · supports · Crystallography of recombinant human diamine oxidase and inhibitor complexes · source_derived_draft · unverified_draft

    ### copper-aoc1-copper-tpq Human AOC1 has one copper ion and a tyrosine-derived topaquinone in each of its two active sites. Condition category: normal nutrient_topic: Copper research collection; topical membership is not evidence of a direct dietary effect. plain_language: Histamine-processing machinery includes both a metal and a protein-derived cofactor. organism: Human AOC1 expressed in insect cells tissue_or_cell_type: Purified protein experimental_model: Crystallography of recombinant human diamine oxidase and inhibitor complexes limitations: Copper/TPQ dependence is molecular evidence, not a trial of copper for histamine intolerance; DAO activity can have multiple determinants. exposure: Native structure and inhibitor binding evidence_span: {"source_cache": "artifacts/copper-research/19764817.abstract.txt", "locator": "Exact primary indexed abstract; zero-based, end-exclusive Unicode character offsets", "file_sha256": "9a01d0dba5caec8a33a77fdbe7190d7a05bdd6e691a570a890eb6b19d4c692b6", "start_char": 0, "end_char": 1343, "text_sha256": "9a01d0dba5caec8a33a77fdbe7190d7a05bdd6e691a570a890eb6b19d4c692b6"} [copper-p19764817] Structure and inhibition of human diamine oxidase. (2009). https://pubmed.ncbi.nlm.nih.gov/19764817/ DOI: 10.1021/bi9014192
    Complete structured claim and evidence
  79. Purified human CARNS1 also synthesized homocarnosine using GABA, with lower catalytic efficiency than the beta-alanine reaction.

    Experimental context and source evidence
    evidence_access
    Primary abstract
    experimental_model
    Recombinant human enzyme substrate comparison.
    limitations
    Shared synthesis does not mean the two peptides have identical functions.
    nutrient_topic
    Carnosine collection; isomer, preparation, species, exposure and manipulation remain explicit. · L-Carnosine / beta-alanyl-L-histidine
    plain_language
    The same enzyme can assemble a related GABA-containing peptide.
    primary_references
    Molecular identification of carnosine synthase as ATP-grasp domain-containing protein 1 (ATPGD1). · 2010 · https://pubmed.ncbi.nlm.nih.gov/20097752/ · DOI 10.1074/jbc.M109.095505

    Carnosine: synthesis, transport, carbonyl chemistry and nutrient interactions (2026-09-19) · lines 36–42

    AI-assisted research curation; primary-abstract references and experimental limitations individually identified. Not publisher full text. · supports · Recombinant human enzyme substrate comparison. · source_derived_draft · unverified_draft

    ## carnosine-homocarnosine The same enzyme can assemble a related GABA-containing peptide. Purified human CARNS1 also synthesized homocarnosine using GABA, with lower catalytic efficiency than the beta-alanine reaction. Model: Recombinant human enzyme substrate comparison. Limitations: Shared synthesis does not mean the two peptides have identical functions. Evidence access: Primary abstract Molecular identification of carnosine synthase as ATP-grasp domain-containing protein 1 (ATPGD1). · 2010 · https://pubmed.ncbi.nlm.nih.gov/20097752/ · DOI 10.1074/jbc.M109.095505
    Complete structured claim and evidence
  80. Recombinant human CARNMT1 methylated carnosine to anserine; the reaction uses S-adenosylmethionine as methyl donor.

    Experimental context and source evidence
    evidence_access
    Primary abstract plus Reactome reaction R-HSA-8876789
    experimental_model
    Purified human enzyme; reaction identity also curated in Reactome R-HSA-8876789.
    limitations
    Does not establish methyl-donor depletion or benefit from folate/B12 supplements.
    nutrient_topic
    Carnosine collection; isomer, preparation, species, exposure and manipulation remain explicit. · L-Carnosine / beta-alanyl-L-histidine
    plain_language
    A methyl group turns carnosine into a distinct peptide.
    primary_references
    UPF0586 Protein C9orf41 Homolog Is Anserine-producing Methyltransferase. · 2015 · https://pubmed.ncbi.nlm.nih.gov/26001783/ · DOI 10.1074/jbc.M115.640037

    Carnosine: synthesis, transport, carbonyl chemistry and nutrient interactions (2026-09-19) · lines 148–154

    AI-assisted research curation; primary-abstract references and experimental limitations individually identified. Not publisher full text. · supports · Purified human enzyme; reaction identity also curated in Reactome R-HSA-8876789. · source_derived_draft · unverified_draft

    ## carnosine-methylation A methyl group turns carnosine into a distinct peptide. Recombinant human CARNMT1 methylated carnosine to anserine; the reaction uses S-adenosylmethionine as methyl donor. Model: Purified human enzyme; reaction identity also curated in Reactome R-HSA-8876789. Limitations: Does not establish methyl-donor depletion or benefit from folate/B12 supplements. Evidence access: Primary abstract plus Reactome reaction R-HSA-8876789 UPF0586 Protein C9orf41 Homolog Is Anserine-producing Methyltransferase. · 2015 · https://pubmed.ncbi.nlm.nih.gov/26001783/ · DOI 10.1074/jbc.M115.640037
    Complete structured claim and evidence

Availability and dependencies

Each situation shows the normal role first, then what the sources report under a specific condition. A shortfall in the diet, a fault in the machinery, and a low blood reading are kept separate because they are not the same thing.

Low histidine supply impairs protein balance, erythropoiesis and skin

Condition: nutrient_deficiency · Controlled histidine-deficient amino-acid feeding for approximately five weeks.

Normal role: Histidine supports protein synthesis and distinct metabolic branches when transport, enzymes and reaction partners function.

Recorded consequence: Plasma/muscle histidine, nitrogen balance and hematocrit decline; repletion reverses measured changes.

Scope: Species, compartment, exposure, manipulation and endpoint remain explicit on each linked claim.

Brain histidine handling changes despite similar plasma exposure

Condition: machinery_impairment · Mouse Pht1/Slc15a4 deletion.

Normal role: Histidine supports protein synthesis and distinct metabolic branches when transport, enzymes and reaction partners function.

Recorded consequence: Reduced brain uptake and tissue distribution, with compensatory Pept2 expression.

Scope: Species, compartment, exposure, manipulation and endpoint remain explicit on each linked claim.

Histidine-processing loss changes folate allocation under methotrexate

Condition: machinery_impairment · Histidine-catabolic enzymes depleted in drug-treated human cancer cells.

Normal role: Histidine supports protein synthesis and distinct metabolic branches when transport, enzymes and reaction partners function.

Recorded consequence: Less drug sensitivity and, for FTCD/HAL experiments, folate sparing and maintained nucleotide synthesis.

Scope: Species, compartment, exposure, manipulation and endpoint remain explicit on each linked claim.

Urocanate processing can fail at UROC1

Condition: machinery_impairment · Human UROC1 variants associated with reduced enzyme function.

Normal role: Histidine supports protein synthesis and distinct metabolic branches when transport, enzymes and reaction partners function.

Recorded consequence: Urocanic aciduria; clinical severity cannot be inferred from a single case.

Scope: Species, compartment, exposure, manipulation and endpoint remain explicit on each linked claim.

FIGLU accumulation does not determine clinical severity

Condition: machinery_impairment · FTCD deficiency identified by newborn screening.

Normal role: Histidine supports protein synthesis and distinct metabolic branches when transport, enzymes and reaction partners function.

Recorded consequence: Most subjects in the reported cohort were asymptomatic; some had mild anemia or developmental delay.

Scope: Species, compartment, exposure, manipulation and endpoint remain explicit on each linked claim.

Slow histidine breakdown is different from inadequate histidine

Condition: machinery_impairment · Screen-detected histidinemia associated with defective histidine breakdown.

Normal role: Histidine supports protein synthesis and distinct metabolic branches when transport, enzymes and reaction partners function.

Recorded consequence: Elevated circulating histidine without a uniform adverse developmental pattern.

Scope: Species, compartment, exposure, manipulation and endpoint remain explicit on each linked claim.

Transporter loss changes mouse B-cell organelle signaling

Condition: machinery_impairment · Mouse Slc15a4 function is lost.

Normal role: Histidine supports protein synthesis and distinct metabolic branches when transport, enzymes and reaction partners function.

Recorded consequence: Altered lysosomal conditions, mTOR/IRF7 output and antibody responses.

Scope: Species, compartment, exposure, manipulation and endpoint remain explicit on each linked claim.

TASL targeting can bypass SLC15A4 loss in human immune-cell assays

Condition: machinery_impairment · SLC15A4 or TASL is deleted; TASL is experimentally tethered to lysosomes in the rescue.

Normal role: Histidine supports protein synthesis and distinct metabolic branches when transport, enzymes and reaction partners function.

Recorded consequence: IRF signaling fails after deletion but can be restored by engineered adaptor localization.

Scope: Species, compartment, exposure, manipulation and endpoint remain explicit on each linked claim.

Histidase loss does not abolish mouse skin acidity

Condition: machinery_impairment · Mouse histidase deficiency.

Normal role: Histidine supports protein synthesis and distinct metabolic branches when transport, enzymes and reaction partners function.

Recorded consequence: Other acidifying systems can maintain the measured skin-surface pH.

Scope: Species, compartment, exposure, manipulation and endpoint remain explicit on each linked claim.

A faulty histidine-charging enzyme can affect neurons

Condition: machinery_impairment · HARS1 Arg137Gln tested across human discovery and yeast/worm functional models.

Normal role: Histidine supports protein synthesis and distinct metabolic branches when transport, enzymes and reaction partners function.

Recorded consequence: Reduced function and neuronal toxicity in models, without a demonstrated histidine-repletion rescue.

Scope: Species, compartment, exposure, manipulation and endpoint remain explicit on each linked claim.

Mitochondrial histidine charging can fail despite substrate availability

Condition: machinery_impairment · Human HARS2 variants and an aberrantly spliced transcript.

Normal role: Histidine supports protein synthesis and distinct metabolic branches when transport, enzymes and reaction partners function.

Recorded consequence: Reduced aminoacylation and unstable deletion product; associated family phenotype includes hearing and ovarian dysfunction.

Scope: Species, compartment, exposure, manipulation and endpoint remain explicit on each linked claim.

The sources

Every document behind this chapter is preserved word for word. Open one to read it in full with its recorded conflicts marked in place.

  • Carnosine: synthesis, transport, carbonyl chemistry and nutrient interactions (2026-09-19)AI-assisted research curation; primary-abstract references and experimental limitations individually identified. Not publisher full text. · unverified_draftRead preserved source
  • Copper: transport, cuproenzymes, deficiency, excess and nutrient interactions (2026-09-17)AI-assisted literature curation; primary study URLs and scope retained in the document and extraction. Not publisher full text. · unverified_draftRead preserved source
  • Ergothioneine: transport, redox chemistry and cross-nutrient mechanisms (2026-09-19)AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · unverified_draftRead preserved source
  • Folate and folic acid: mechanisms, deficiency and nutrient interactions (2026-09-17)AI-assisted literature curation; primary study URLs and scope retained in the document and extraction. Not publisher full text. · unverified_draftRead preserved source
  • Iron: absorption, trafficking, iron-dependent enzymes and nutrient interactions (2026-09-17)AI-assisted literature curation; primary study URLs and scope retained in the document and extraction. Not publisher full text. · unverified_draftRead preserved source
  • L-Histidine: supply, catabolism, histamine, receptors and cross-nutrient mechanisms (2026-09-19)AI-assisted research curation; primary references, access levels and experimental limitations individually identified. Not publisher full text. · unverified_draftRead preserved source
  • Vitamin B6: mechanisms, deficiency and nutrient interactions (2026-09-17)AI-assisted literature curation; primary study URLs and scope retained in the document and extraction. Not publisher full text. · unverified_draftRead preserved source
  • Zinc: transport, enzyme loading, deficiency and nutrient interactions (2026-09-17)AI-assisted literature curation; primary study URLs and scope retained in the document and extraction. Not publisher full text. · unverified_draftRead preserved source

Recorded disagreements

Where two sources say different things, both are kept and the difference is explained. You can discuss a disagreement or propose a mechanism that might account for it.

    Open questions in this collection

    Questions the curators could not answer from the sources in front of them, kept here with the reason each one is still open. These are gaps in this collection, not findings or proof that no one has studied them.

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