Component

All-trans-retinal

All-trans retinaldehyde; substrate for reduction to retinol or oxidation to all-trans-retinoic acid. All-trans retinaldehyde; reactive visual-pigment photoproduct.

28 recorded relationships. Experimental role, claim status and evidence remain attached to each record.

How nutrients influence it

Every nutrient with a recorded effect on this component, credited to the nutrient that acted rather than the chapter that recorded it. Open a nutrient to see the findings and the conditions they were measured under.

How nutrients reach it in more than one step

Chains of two or more recorded steps that end here, grouped by the nutrient they start from. Each step is a separate finding, so a chain is a route a mechanism could take, not proof that it does.

Tracing routes…

What it does

Every recorded relationship this component is part of, grouped by its role. Plain wording comes first; the technical statement follows.

Recorded relationships

What it acts on

  1. Illuminating native bovine RGR converted its bound all-trans-retinal stereospecifically to the 11-cis configuration.

    All-trans-retinal → 11-cis-retinal source_derived_draftungraded
    Experimental context and source evidence
    cross_nutrient
    false
    evidence_location
    Abstract: irradiation and isomer analysis
    experimental_model
    Purified native RGR photochemistry
    exposure
    470-nm monochromatic or near-UV irradiation; duration absent from the abstract.
    limitations
    Abstract-limited; the finding does not establish relative flux in living human eyes.
    nutrient
    Vitamin A · Vitamin A
    nutrient_topic
    Vitamin A expansion research collection; topical membership is not evidence of a direct dietary effect. · Vitamin A
    organism
    Bos taurus
    plain_language
    Light lets RGR reverse the retinal isomer change used in visual pigments.
    primary_references
    [vav-hao1999] The endogenous chromophore of retinal G protein-coupled receptor opsin from the pigment epithelium. (1999). https://pubmed.ncbi.nlm.nih.gov/10037690/ DOI: 10.1074/jbc.274.10.6085
    tissue_or_cell_type
    RPE-derived protein

    Vitamin A expansion: reproduction, light-driven vision and shared mechanisms (2026-09-17) · lines 423–436

    AI-assisted literature curation; primary study URLs and scope retained in the document and extraction. Not publisher full text. · supports · Purified native RGR photochemistry · source_derived_draft · unverified_draft

    ### vae-rgr-photoisomerization Illuminating native bovine RGR converted its bound all-trans-retinal stereospecifically to the 11-cis configuration. Condition category: normal nutrient_topic: Vitamin A expansion research collection; topical membership is not evidence of a direct dietary effect. plain_language: Light lets RGR reverse the retinal isomer change used in visual pigments. organism: Bos taurus tissue_or_cell_type: RPE-derived protein experimental_model: Purified native RGR photochemistry limitations: Abstract-limited; the finding does not establish relative flux in living human eyes. exposure: 470-nm monochromatic or near-UV irradiation; duration absent from the abstract. cross_nutrient: false evidence_location: Abstract: irradiation and isomer analysis nutrient: Vitamin A [vav-hao1999] The endogenous chromophore of retinal G protein-coupled receptor opsin from the pigment epithelium. (1999). https://pubmed.ncbi.nlm.nih.gov/10037690/ DOI: 10.1074/jbc.274.10.6085
    Complete structured claim and evidence

What acts on it

  1. RGR purified from bovine RPE contained predominantly all-trans-retinal as its endogenous dark-state chromophore.

    Experimental context and source evidence
    cross_nutrient
    false
    evidence_location
    Abstract: endogenous retinaloxime isomers
    experimental_model
    Native RGR purification and hydroxylamine derivatization
    exposure
    Dark-handled purified protein; retinal-oxime isomers identified.
    limitations
    Abstract-limited; binding composition does not quantify whole-eye recycling.
    nutrient
    Vitamin A · Vitamin A
    nutrient_topic
    Vitamin A expansion research collection; topical membership is not evidence of a direct dietary effect. · Vitamin A
    organism
    Bos taurus
    plain_language
    RGR carries the spent all-trans retinal isomer before light reaches it.
    primary_references
    [vav-hao1999] The endogenous chromophore of retinal G protein-coupled receptor opsin from the pigment epithelium. (1999). https://pubmed.ncbi.nlm.nih.gov/10037690/ DOI: 10.1074/jbc.274.10.6085
    tissue_or_cell_type
    retinal pigment epithelium

    Vitamin A expansion: reproduction, light-driven vision and shared mechanisms (2026-09-17) · lines 408–421

    AI-assisted literature curation; primary study URLs and scope retained in the document and extraction. Not publisher full text. · supports · Native RGR purification and hydroxylamine derivatization · source_derived_draft · unverified_draft

    ### vae-rgr-dark-chromophore RGR purified from bovine RPE contained predominantly all-trans-retinal as its endogenous dark-state chromophore. Condition category: normal nutrient_topic: Vitamin A expansion research collection; topical membership is not evidence of a direct dietary effect. plain_language: RGR carries the spent all-trans retinal isomer before light reaches it. organism: Bos taurus tissue_or_cell_type: retinal pigment epithelium experimental_model: Native RGR purification and hydroxylamine derivatization limitations: Abstract-limited; binding composition does not quantify whole-eye recycling. exposure: Dark-handled purified protein; retinal-oxime isomers identified. cross_nutrient: false evidence_location: Abstract: endogenous retinaloxime isomers nutrient: Vitamin A [vav-hao1999] The endogenous chromophore of retinal G protein-coupled receptor opsin from the pigment epithelium. (1999). https://pubmed.ncbi.nlm.nih.gov/10037690/ DOI: 10.1074/jbc.274.10.6085
    Complete structured claim and evidence
  2. Recombinant human AOX converted all-trans-retinaldehyde to all-trans-retinoic acid, with an apparent Km near 1.5 micromolar.

    Human aldehyde oxidase 1 / AOX1 → All-trans-retinal source_derived_draftungraded
    Experimental context and source evidence
    evidence_span
    {"source_cache": "artifacts/molybdenum-research/33355213.abstract.txt", "locator": "Exact primary indexed abstract; zero-based, end-exclusive Unicode character offsets", "file_sha256": "0edb31bff85231dfbde4a99d6858db611c099d2cd00982cad88616aa960b5aa2", "start_char": 0, "end_char": 2211, "text_sha256": "0edb31bff85231dfbde4a99d6858db611c099d2cd00982cad88616aa960b5aa2"}
    experimental_model
    Recombinant human AOX and human liver S9 kinetics, inhibitors and protein quantification
    exposure
    Retinaldehyde with/without NAD+; selective inhibitors
    limitations
    Ex-vivo contribution depends on substrate and NAD+ availability; no dietary molybdenum intervention or universal in-vivo percentage.
    nutrient_topic
    Molybdenum research collection; topical membership is not evidence of a direct dietary effect. · Molybdenum
    organism
    Homo sapiens
    plain_language
    A molybdenum enzyme can contribute to making vitamin A signaling molecules.
    primary_references
    [mo-p33355213] Aldehyde Oxidase Contributes to All-Trans-Retinoic Acid Biosynthesis in Human Liver. (2021). https://pubmed.ncbi.nlm.nih.gov/33355213/ DOI: 10.1124/dmd.120.000296
    tissue_or_cell_type
    Purified enzyme and liver S9 fractions

    Molybdenum: cofactor assembly, sulfur metabolism and nutrient interactions (2026-09-17) · lines 898–909

    AI-assisted literature curation; primary study URLs and scope retained in the document and extraction. Not publisher full text. · supports · Recombinant human AOX and human liver S9 kinetics, inhibitors and protein quantification · source_derived_draft · unverified_draft

    ### mo-aox-retinoic-acid Recombinant human AOX converted all-trans-retinaldehyde to all-trans-retinoic acid, with an apparent Km near 1.5 micromolar. Condition category: normal nutrient_topic: Molybdenum research collection; topical membership is not evidence of a direct dietary effect. plain_language: A molybdenum enzyme can contribute to making vitamin A signaling molecules. organism: Homo sapiens tissue_or_cell_type: Purified enzyme and liver S9 fractions experimental_model: Recombinant human AOX and human liver S9 kinetics, inhibitors and protein quantification limitations: Ex-vivo contribution depends on substrate and NAD+ availability; no dietary molybdenum intervention or universal in-vivo percentage. exposure: Retinaldehyde with/without NAD+; selective inhibitors evidence_span: {"source_cache": "artifacts/molybdenum-research/33355213.abstract.txt", "locator": "Exact primary indexed abstract; zero-based, end-exclusive Unicode character offsets", "file_sha256": "0edb31bff85231dfbde4a99d6858db611c099d2cd00982cad88616aa960b5aa2", "start_char": 0, "end_char": 2211, "text_sha256": "0edb31bff85231dfbde4a99d6858db611c099d2cd00982cad88616aa960b5aa2"} [mo-p33355213] Aldehyde Oxidase Contributes to All-Trans-Retinoic Acid Biosynthesis in Human Liver. (2021). https://pubmed.ncbi.nlm.nih.gov/33355213/ DOI: 10.1124/dmd.120.000296
    Complete structured claim and evidence
  3. Light activation changes rhodopsin-bound 11-cis-retinal into its all-trans geometry, coupled to receptor activation.

    11-cis-retinal → All-trans-retinal source_derived_draftungraded
    Experimental context and source evidence
    experimental_model
    Solid-state NMR before/after illumination
    limitations
    Bound chromophore conversion precedes release of free retinal.
    nutrient_topic
    Vitamin A research collection; topical membership is not evidence of a direct dietary effect. · Vitamin A
    organism
    Bos taurus
    plain_language
    A photon changes the bound retinoid shape and starts the signal.
    primary_references
    [grobner-2000] Observations of light-induced structural changes of retinal within rhodopsin (2000). https://www.nature.com/articles/35015604 DOI: 10.1038/35015604
    tissue_or_cell_type
    Purified rhodopsin

    Vitamin A: forms, mechanisms, deficiency and excess (2026-09-17) · lines 655–664

    AI-assisted literature curation; primary study URLs and scope retained in the document and extraction. Not publisher full text. · supports · Solid-state NMR before/after illumination · source_derived_draft · unverified_draft

    ### a-vision-photoisomerization Light activation changes rhodopsin-bound 11-cis-retinal into its all-trans geometry, coupled to receptor activation. Condition category: normal nutrient_topic: Vitamin A research collection; topical membership is not evidence of a direct dietary effect. plain_language: A photon changes the bound retinoid shape and starts the signal. organism: Bos taurus tissue_or_cell_type: Purified rhodopsin experimental_model: Solid-state NMR before/after illumination limitations: Bound chromophore conversion precedes release of free retinal. [grobner-2000] Observations of light-induced structural changes of retinal within rhodopsin (2000). https://www.nature.com/articles/35015604 DOI: 10.1038/35015604
    Complete structured claim and evidence
  4. Human BCO1 generated retinal from alpha-carotene in substrate assays.

    Beta-carotene oxygenase 1 / BCO1 → All-trans-retinal source_derived_draftungraded
    Experimental context and source evidence
    evidence_location
    Abstract
    experimental_model
    Purified human BCO1 expressed in E. coli; substrate incubations and HPLC.
    exposure
    Purified BCO1 and alpha-carotene concentration series.
    limitations
    Lower catalytic efficiency than beta-carotene under these assay conditions.
    nutrient_topic
    Vitamin A research collection; topical membership is not evidence of a direct dietary effect. · Vitamin A
    organism
    Homo sapiens protein expressed in Escherichia coli
    outcome
    Human BCO1 generated retinal from alpha-carotene in substrate assays.
    plain_language
    Alpha-carotene can feed retinal production.
    primary_references
    [va-delasena-2013] Substrate specificity of purified recombinant human beta-carotene 15,15'-oxygenase (BCO1) (2013). https://pubmed.ncbi.nlm.nih.gov/24187135/ DOI: 10.1074/jbc.M113.507160
    tissue_or_cell_type
    Cell-free enzyme

    Vitamin A: forms, mechanisms, deficiency and excess (2026-09-17) · lines 145–157

    AI-assisted literature curation; primary study URLs and scope retained in the document and extraction. Not publisher full text. · supports · Purified human BCO1 expressed in E. coli; substrate incubations and HPLC. · source_derived_draft · unverified_draft

    ### va-bco1-alpha-carotene Human BCO1 generated retinal from alpha-carotene in substrate assays. Condition category: normal nutrient_topic: Vitamin A research collection; topical membership is not evidence of a direct dietary effect. plain_language: Alpha-carotene can feed retinal production. organism: Homo sapiens protein expressed in Escherichia coli tissue_or_cell_type: Cell-free enzyme experimental_model: Purified human BCO1 expressed in E. coli; substrate incubations and HPLC. limitations: Lower catalytic efficiency than beta-carotene under these assay conditions. exposure: Purified BCO1 and alpha-carotene concentration series. outcome: Human BCO1 generated retinal from alpha-carotene in substrate assays. evidence_location: Abstract [va-delasena-2013] Substrate specificity of purified recombinant human beta-carotene 15,15'-oxygenase (BCO1) (2013). https://pubmed.ncbi.nlm.nih.gov/24187135/ DOI: 10.1074/jbc.M113.507160
    Complete structured claim and evidence
  5. Human BCO1 generated retinal from beta-cryptoxanthin in substrate assays.

    Beta-carotene oxygenase 1 / BCO1 → All-trans-retinal source_derived_draftungraded
    Experimental context and source evidence
    evidence_location
    Abstract
    experimental_model
    Purified human BCO1 expressed in E. coli; substrate incubations and HPLC.
    exposure
    Purified BCO1 and beta-cryptoxanthin concentration series.
    limitations
    Does not quantify competition with the BCO2 pathway in vivo.
    nutrient_topic
    Vitamin A research collection; topical membership is not evidence of a direct dietary effect. · Vitamin A
    organism
    Homo sapiens protein expressed in Escherichia coli
    outcome
    Human BCO1 generated retinal from beta-cryptoxanthin in substrate assays.
    plain_language
    This hydroxylated carotenoid also supplies retinal in vitro.
    primary_references
    [va-delasena-2013] Substrate specificity of purified recombinant human beta-carotene 15,15'-oxygenase (BCO1) (2013). https://pubmed.ncbi.nlm.nih.gov/24187135/ DOI: 10.1074/jbc.M113.507160
    tissue_or_cell_type
    Cell-free enzyme

    Vitamin A: forms, mechanisms, deficiency and excess (2026-09-17) · lines 159–171

    AI-assisted literature curation; primary study URLs and scope retained in the document and extraction. Not publisher full text. · supports · Purified human BCO1 expressed in E. coli; substrate incubations and HPLC. · source_derived_draft · unverified_draft

    ### va-bco1-beta-cryptoxanthin Human BCO1 generated retinal from beta-cryptoxanthin in substrate assays. Condition category: normal nutrient_topic: Vitamin A research collection; topical membership is not evidence of a direct dietary effect. plain_language: This hydroxylated carotenoid also supplies retinal in vitro. organism: Homo sapiens protein expressed in Escherichia coli tissue_or_cell_type: Cell-free enzyme experimental_model: Purified human BCO1 expressed in E. coli; substrate incubations and HPLC. limitations: Does not quantify competition with the BCO2 pathway in vivo. exposure: Purified BCO1 and beta-cryptoxanthin concentration series. outcome: Human BCO1 generated retinal from beta-cryptoxanthin in substrate assays. evidence_location: Abstract [va-delasena-2013] Substrate specificity of purified recombinant human beta-carotene 15,15'-oxygenase (BCO1) (2013). https://pubmed.ncbi.nlm.nih.gov/24187135/ DOI: 10.1074/jbc.M113.507160
    Complete structured claim and evidence
  6. Purified human BCO1 cleaved all-trans-beta-carotene centrally to all-trans-retinal.

    Beta-carotene oxygenase 1 / BCO1 → All-trans-retinal source_derived_draftungraded
    Experimental context and source evidence
    evidence_location
    Figure 3
    experimental_model
    Purified human BCO1 expressed in E. coli; substrate incubations and HPLC.
    exposure
    20 micromolar beta-carotene, 500 ng enzyme/200 microliters, 37 C, 15 minutes.
    limitations
    Purified-enzyme rates do not determine dietary conversion efficiency.
    nutrient_topic
    Vitamin A research collection; topical membership is not evidence of a direct dietary effect. · Vitamin A
    organism
    Homo sapiens protein expressed in Escherichia coli
    outcome
    Purified human BCO1 cleaved all-trans-beta-carotene centrally to all-trans-retinal.
    plain_language
    BCO1 turns a carotenoid precursor into retinal.
    primary_references
    [va-delasena-2013] Substrate specificity of purified recombinant human beta-carotene 15,15'-oxygenase (BCO1) (2013). https://pubmed.ncbi.nlm.nih.gov/24187135/ DOI: 10.1074/jbc.M113.507160
    tissue_or_cell_type
    Cell-free enzyme

    Vitamin A: forms, mechanisms, deficiency and excess (2026-09-17) · lines 131–143

    AI-assisted literature curation; primary study URLs and scope retained in the document and extraction. Not publisher full text. · supports · Purified human BCO1 expressed in E. coli; substrate incubations and HPLC. · source_derived_draft · unverified_draft

    ### va-bco1-central-cleavage Purified human BCO1 cleaved all-trans-beta-carotene centrally to all-trans-retinal. Condition category: normal nutrient_topic: Vitamin A research collection; topical membership is not evidence of a direct dietary effect. plain_language: BCO1 turns a carotenoid precursor into retinal. organism: Homo sapiens protein expressed in Escherichia coli tissue_or_cell_type: Cell-free enzyme experimental_model: Purified human BCO1 expressed in E. coli; substrate incubations and HPLC. limitations: Purified-enzyme rates do not determine dietary conversion efficiency. exposure: 20 micromolar beta-carotene, 500 ng enzyme/200 microliters, 37 C, 15 minutes. outcome: Purified human BCO1 cleaved all-trans-beta-carotene centrally to all-trans-retinal. evidence_location: Figure 3 [va-delasena-2013] Substrate specificity of purified recombinant human beta-carotene 15,15'-oxygenase (BCO1) (2013). https://pubmed.ncbi.nlm.nih.gov/24187135/ DOI: 10.1074/jbc.M113.507160
    Complete structured claim and evidence
  7. Isotope tracing showed that oxygen incorporated into both BCO1-generated retinal products originated from molecular oxygen.

    Molecular oxygen → All-trans-retinal source_derived_draftungraded
    Experimental context and source evidence
    evidence_location
    Abstract
    experimental_model
    Recombinant human BCO1 with isotopically labeled oxygen and water.
    exposure
    18O2 versus H2-18O incubations with beta-carotene.
    limitations
    Reaction chemistry; no claim about clinical hypoxia or oxygen supplementation.
    nutrient_topic
    Vitamin A research collection; topical membership is not evidence of a direct dietary effect. · Vitamin A
    organism
    Homo sapiens recombinant protein
    outcome
    Isotope tracing showed that oxygen incorporated into both BCO1-generated retinal products originated from molecular oxygen.
    plain_language
    BCO1 cleavage uses oxygen gas to make the two retinal aldehydes.
    primary_references
    [va-delasena-2014] The human enzyme that converts dietary provitamin A carotenoids to vitamin A is a dioxygenase (2014). https://pubmed.ncbi.nlm.nih.gov/24668807/ DOI: 10.1074/jbc.M114.557710
    tissue_or_cell_type
    Cell-free enzyme

    Vitamin A: forms, mechanisms, deficiency and excess (2026-09-17) · lines 173–185

    AI-assisted literature curation; primary study URLs and scope retained in the document and extraction. Not publisher full text. · supports · Recombinant human BCO1 with isotopically labeled oxygen and water. · source_derived_draft · unverified_draft

    ### va-bco1-dioxygen-incorporation Isotope tracing showed that oxygen incorporated into both BCO1-generated retinal products originated from molecular oxygen. Condition category: normal nutrient_topic: Vitamin A research collection; topical membership is not evidence of a direct dietary effect. plain_language: BCO1 cleavage uses oxygen gas to make the two retinal aldehydes. organism: Homo sapiens recombinant protein tissue_or_cell_type: Cell-free enzyme experimental_model: Recombinant human BCO1 with isotopically labeled oxygen and water. limitations: Reaction chemistry; no claim about clinical hypoxia or oxygen supplementation. exposure: 18O2 versus H2-18O incubations with beta-carotene. outcome: Isotope tracing showed that oxygen incorporated into both BCO1-generated retinal products originated from molecular oxygen. evidence_location: Abstract [va-delasena-2014] The human enzyme that converts dietary provitamin A carotenoids to vitamin A is a dioxygenase (2014). https://pubmed.ncbi.nlm.nih.gov/24668807/ DOI: 10.1074/jbc.M114.557710
    Complete structured claim and evidence
  8. Recombinant human RDH10 oxidized all-trans-retinol with NAD+ in microsomal assays.

    Retinol dehydrogenase 10 / RDH10 → All-trans-retinal source_derived_draftungraded
    Experimental context and source evidence
    cross_nutrient
    NAD-dependent retinol oxidation connects vitamin A metabolism to nicotinamide redox-cofactor availability.
    evidence_location
    Results: cofactor preference
    experimental_model
    Human RDH10 in Sf9 microsomes and siRNA perturbation in human cells.
    exposure
    1 micromolar retinol and 1 millimolar NAD+ versus NADP+.
    limitations
    Cofactor specificity does not establish an effect of dietary niacin deficiency.
    nutrient_topic
    Vitamin A research collection; topical membership is not evidence of a direct dietary effect. · Vitamin A
    organism
    Homo sapiens protein in Spodoptera frugiperda Sf9 cells
    outcome
    Recombinant human RDH10 oxidized all-trans-retinol with NAD+ in microsomal assays.
    plain_language
    RDH10 uses the oxidized nicotinamide cofactor to make retinal.
    primary_references
    [va-belyaeva-2008] Kinetic Analysis of Human Enzyme RDH10 Defines the Characteristics of a Physiologically Relevant Retinol Dehydrogenase (2008). https://pmc.ncbi.nlm.nih.gov/articles/PMC2459273/ DOI: 10.1074/jbc.M800019200
    tissue_or_cell_type
    Microsomes

    Vitamin A: forms, mechanisms, deficiency and excess (2026-09-17) · lines 487–500

    AI-assisted literature curation; primary study URLs and scope retained in the document and extraction. Not publisher full text. · supports · Human RDH10 in Sf9 microsomes and siRNA perturbation in human cells. · source_derived_draft · unverified_draft

    ### va-rdh10-retinol-oxidation Recombinant human RDH10 oxidized all-trans-retinol with NAD+ in microsomal assays. Condition category: normal nutrient_topic: Vitamin A research collection; topical membership is not evidence of a direct dietary effect. plain_language: RDH10 uses the oxidized nicotinamide cofactor to make retinal. organism: Homo sapiens protein in Spodoptera frugiperda Sf9 cells tissue_or_cell_type: Microsomes experimental_model: Human RDH10 in Sf9 microsomes and siRNA perturbation in human cells. limitations: Cofactor specificity does not establish an effect of dietary niacin deficiency. exposure: 1 micromolar retinol and 1 millimolar NAD+ versus NADP+. outcome: Recombinant human RDH10 oxidized all-trans-retinol with NAD+ in microsomal assays. evidence_location: Results: cofactor preference cross_nutrient: NAD-dependent retinol oxidation connects vitamin A metabolism to nicotinamide redox-cofactor availability. [va-belyaeva-2008] Kinetic Analysis of Human Enzyme RDH10 Defines the Characteristics of a Physiologically Relevant Retinol Dehydrogenase (2008). https://pmc.ncbi.nlm.nih.gov/articles/PMC2459273/ DOI: 10.1074/jbc.M800019200
    Complete structured claim and evidence

Where it participates (unsigned role)

  1. Bovine RGR K255A produced little 11-cis-retinal under illumination despite expression comparable to wild-type RGR in HEK293S GnTI-negative cells.

    RGR K255A variant → 11-cis-retinal source_derived_draftungraded
    Experimental context and source evidence
    availability_state
    machinery_impairment Imported condition classification; unverified.
    cross_nutrient
    false
    evidence_location
    Results/Figure 7a-c
    experimental_model
    Recombinant bovine wild-type/K255A RGR comparison
    exposure
    All-trans-retinal and 530-nm light, with CRALBP; Figure 7.
    limitations
    Construct-specific assay; K255A numbering is retained from this paper.
    nutrient
    Vitamin A · Vitamin A
    nutrient_topic
    Vitamin A expansion research collection; topical membership is not evidence of a direct dietary effect. · Vitamin A
    organism
    Bos taurus protein in Homo sapiens cells
    plain_language
    Disrupting the retinal-binding lysine impaired the light-driven reaction.
    primary_references
    [vav-zhang2019] Photic generation of 11-cis-retinal in bovine retinal pigment epithelium. (2019). https://pubmed.ncbi.nlm.nih.gov/31694912/ DOI: 10.1074/jbc.ra119.011169
    tissue_or_cell_type
    HEK293S GnTI-negative homogenates
    trigger_kind
    machinery_impairment Imported condition classification; unverified.

    Vitamin A expansion: reproduction, light-driven vision and shared mechanisms (2026-09-17) · lines 453–466

    AI-assisted literature curation; primary study URLs and scope retained in the document and extraction. Not publisher full text. · supports · Recombinant bovine wild-type/K255A RGR comparison · source_derived_draft · unverified_draft

    ### vae-rgr-k255a-photoactivity Bovine RGR K255A produced little 11-cis-retinal under illumination despite expression comparable to wild-type RGR in HEK293S GnTI-negative cells. Condition category: machinery_impairment nutrient_topic: Vitamin A expansion research collection; topical membership is not evidence of a direct dietary effect. plain_language: Disrupting the retinal-binding lysine impaired the light-driven reaction. organism: Bos taurus protein in Homo sapiens cells tissue_or_cell_type: HEK293S GnTI-negative homogenates experimental_model: Recombinant bovine wild-type/K255A RGR comparison limitations: Construct-specific assay; K255A numbering is retained from this paper. exposure: All-trans-retinal and 530-nm light, with CRALBP; Figure 7. cross_nutrient: false evidence_location: Results/Figure 7a-c nutrient: Vitamin A [vav-zhang2019] Photic generation of 11-cis-retinal in bovine retinal pigment epithelium. (2019). https://pubmed.ncbi.nlm.nih.gov/31694912/ DOI: 10.1074/jbc.ra119.011169
    Complete structured claim and evidence
  2. At 2 mM, ascorbate exacerbated phototoxicity; zeaxanthin or alpha-tocopherol partly ameliorated it.

    Experimental context and source evidence
    evidence_span
    {"source_cache": "artifacts/zeaxanthin-research/35740030.abstract.txt", "locator": "Primary indexed abstract; zero-based, end-exclusive Unicode character offsets", "file_sha256": "6c66a3183f1b2cc985ad22d5350f53aaeaf65b2519e89ddc13e0460a035903e8", "start_char": 0, "end_char": 1784, "text_sha256": "6c66a3183f1b2cc985ad22d5350f53aaeaf65b2519e89ddc13e0460a035903e8"}
    experimental_model
    Retinaldehyde-liposome photosensitization with cells
    exposure
    4 micromolar zeaxanthin, 80 micromolar alpha-tocopherol; 0.5–2 mM ascorbate
    limitations
    Bath concentrations and irradiation are not oral doses or established human safety limits. Combination conditions and localization matter.
    nutrient_topic
    Zeaxanthin research collection; topical membership is not evidence of a direct dietary effect. · Dietary (3R,3-prime-R)-zeaxanthin
    organism
    Human ARPE-19 cells and unsaturated liposomes
    plain_language
    A higher concentration changed the interaction.
    primary_references
    [zeaxanthin-p35740030] Is There an Optimal Combination of AREDS2 Antioxidants Zeaxanthin, Vitamin E and Vitamin C on Light-Induced Toxicity of Vitamin A Aldehyde to the Retina? (2022). https://pubmed.ncbi.nlm.nih.gov/35740030/ DOI: 10.3390/antiox11061132
    tissue_or_cell_type
    RPE injury model

    Zeaxanthin: metabolism, signaling and nutrient connections (2026-09-17) · lines 951–962

    AI-assisted literature curation; primary study URLs and scope retained in the document and extraction. Not publisher full text. · supports · Retinaldehyde-liposome photosensitization with cells · source_derived_draft · unverified_draft

    ### zeaxanthin-ascorbate-high At 2 mM, ascorbate exacerbated phototoxicity; zeaxanthin or alpha-tocopherol partly ameliorated it. Condition category: normal nutrient_topic: Zeaxanthin research collection; topical membership is not evidence of a direct dietary effect. plain_language: A higher concentration changed the interaction. organism: Human ARPE-19 cells and unsaturated liposomes tissue_or_cell_type: RPE injury model experimental_model: Retinaldehyde-liposome photosensitization with cells limitations: Bath concentrations and irradiation are not oral doses or established human safety limits. Combination conditions and localization matter. exposure: 4 micromolar zeaxanthin, 80 micromolar alpha-tocopherol; 0.5–2 mM ascorbate evidence_span: {"source_cache": "artifacts/zeaxanthin-research/35740030.abstract.txt", "locator": "Primary indexed abstract; zero-based, end-exclusive Unicode character offsets", "file_sha256": "6c66a3183f1b2cc985ad22d5350f53aaeaf65b2519e89ddc13e0460a035903e8", "start_char": 0, "end_char": 1784, "text_sha256": "6c66a3183f1b2cc985ad22d5350f53aaeaf65b2519e89ddc13e0460a035903e8"} [zeaxanthin-p35740030] Is There an Optimal Combination of AREDS2 Antioxidants Zeaxanthin, Vitamin E and Vitamin C on Light-Induced Toxicity of Vitamin A Aldehyde to the Retina? (2022). https://pubmed.ncbi.nlm.nih.gov/35740030/ DOI: 10.3390/antiox11061132
    Complete structured claim and evidence
  3. Adding 0.5 mM ascorbate to the combination raised viability to approximately 69%.

    Experimental context and source evidence
    evidence_span
    {"source_cache": "artifacts/zeaxanthin-research/35740030.abstract.txt", "locator": "Primary indexed abstract; zero-based, end-exclusive Unicode character offsets", "file_sha256": "6c66a3183f1b2cc985ad22d5350f53aaeaf65b2519e89ddc13e0460a035903e8", "start_char": 0, "end_char": 1784, "text_sha256": "6c66a3183f1b2cc985ad22d5350f53aaeaf65b2519e89ddc13e0460a035903e8"}
    experimental_model
    Retinaldehyde-liposome photosensitization with cells
    exposure
    4 micromolar zeaxanthin, 80 micromolar alpha-tocopherol; 0.5–2 mM ascorbate
    limitations
    Bath concentrations and irradiation are not oral doses or established human safety limits. Combination conditions and localization matter.
    nutrient_topic
    Zeaxanthin research collection; topical membership is not evidence of a direct dietary effect. · Dietary (3R,3-prime-R)-zeaxanthin
    organism
    Human ARPE-19 cells and unsaturated liposomes
    plain_language
    Vitamin C added protection under this condition.
    primary_references
    [zeaxanthin-p35740030] Is There an Optimal Combination of AREDS2 Antioxidants Zeaxanthin, Vitamin E and Vitamin C on Light-Induced Toxicity of Vitamin A Aldehyde to the Retina? (2022). https://pubmed.ncbi.nlm.nih.gov/35740030/ DOI: 10.3390/antiox11061132
    tissue_or_cell_type
    RPE injury model

    Zeaxanthin: metabolism, signaling and nutrient connections (2026-09-17) · lines 938–949

    AI-assisted literature curation; primary study URLs and scope retained in the document and extraction. Not publisher full text. · supports · Retinaldehyde-liposome photosensitization with cells · source_derived_draft · unverified_draft

    ### zeaxanthin-ascorbate-low Adding 0.5 mM ascorbate to the combination raised viability to approximately 69%. Condition category: normal nutrient_topic: Zeaxanthin research collection; topical membership is not evidence of a direct dietary effect. plain_language: Vitamin C added protection under this condition. organism: Human ARPE-19 cells and unsaturated liposomes tissue_or_cell_type: RPE injury model experimental_model: Retinaldehyde-liposome photosensitization with cells limitations: Bath concentrations and irradiation are not oral doses or established human safety limits. Combination conditions and localization matter. exposure: 4 micromolar zeaxanthin, 80 micromolar alpha-tocopherol; 0.5–2 mM ascorbate evidence_span: {"source_cache": "artifacts/zeaxanthin-research/35740030.abstract.txt", "locator": "Primary indexed abstract; zero-based, end-exclusive Unicode character offsets", "file_sha256": "6c66a3183f1b2cc985ad22d5350f53aaeaf65b2519e89ddc13e0460a035903e8", "start_char": 0, "end_char": 1784, "text_sha256": "6c66a3183f1b2cc985ad22d5350f53aaeaf65b2519e89ddc13e0460a035903e8"} [zeaxanthin-p35740030] Is There an Optimal Combination of AREDS2 Antioxidants Zeaxanthin, Vitamin E and Vitamin C on Light-Induced Toxicity of Vitamin A Aldehyde to the Retina? (2022). https://pubmed.ncbi.nlm.nih.gov/35740030/ DOI: 10.3390/antiox11061132
    Complete structured claim and evidence
  4. Combined zeaxanthin and alpha-tocopherol raised viability from about 26% to 63% in the tested model.

    Experimental context and source evidence
    evidence_span
    {"source_cache": "artifacts/zeaxanthin-research/35740030.abstract.txt", "locator": "Primary indexed abstract; zero-based, end-exclusive Unicode character offsets", "file_sha256": "6c66a3183f1b2cc985ad22d5350f53aaeaf65b2519e89ddc13e0460a035903e8", "start_char": 0, "end_char": 1784, "text_sha256": "6c66a3183f1b2cc985ad22d5350f53aaeaf65b2519e89ddc13e0460a035903e8"}
    experimental_model
    Retinaldehyde-liposome photosensitization with cells
    exposure
    4 micromolar zeaxanthin, 80 micromolar alpha-tocopherol; 0.5–2 mM ascorbate
    limitations
    Bath concentrations and irradiation are not oral doses or established human safety limits. Combination conditions and localization matter.
    nutrient_topic
    Zeaxanthin research collection; topical membership is not evidence of a direct dietary effect. · Dietary (3R,3-prime-R)-zeaxanthin
    organism
    Human ARPE-19 cells and unsaturated liposomes
    plain_language
    The pair protected cells against this defined light challenge.
    primary_references
    [zeaxanthin-p35740030] Is There an Optimal Combination of AREDS2 Antioxidants Zeaxanthin, Vitamin E and Vitamin C on Light-Induced Toxicity of Vitamin A Aldehyde to the Retina? (2022). https://pubmed.ncbi.nlm.nih.gov/35740030/ DOI: 10.3390/antiox11061132
    tissue_or_cell_type
    RPE injury model

    Zeaxanthin: metabolism, signaling and nutrient connections (2026-09-17) · lines 925–936

    AI-assisted literature curation; primary study URLs and scope retained in the document and extraction. Not publisher full text. · supports · Retinaldehyde-liposome photosensitization with cells · source_derived_draft · unverified_draft

    ### zeaxanthin-c-e-z-protection Combined zeaxanthin and alpha-tocopherol raised viability from about 26% to 63% in the tested model. Condition category: normal nutrient_topic: Zeaxanthin research collection; topical membership is not evidence of a direct dietary effect. plain_language: The pair protected cells against this defined light challenge. organism: Human ARPE-19 cells and unsaturated liposomes tissue_or_cell_type: RPE injury model experimental_model: Retinaldehyde-liposome photosensitization with cells limitations: Bath concentrations and irradiation are not oral doses or established human safety limits. Combination conditions and localization matter. exposure: 4 micromolar zeaxanthin, 80 micromolar alpha-tocopherol; 0.5–2 mM ascorbate evidence_span: {"source_cache": "artifacts/zeaxanthin-research/35740030.abstract.txt", "locator": "Primary indexed abstract; zero-based, end-exclusive Unicode character offsets", "file_sha256": "6c66a3183f1b2cc985ad22d5350f53aaeaf65b2519e89ddc13e0460a035903e8", "start_char": 0, "end_char": 1784, "text_sha256": "6c66a3183f1b2cc985ad22d5350f53aaeaf65b2519e89ddc13e0460a035903e8"} [zeaxanthin-p35740030] Is There an Optimal Combination of AREDS2 Antioxidants Zeaxanthin, Vitamin E and Vitamin C on Light-Induced Toxicity of Vitamin A Aldehyde to the Retina? (2022). https://pubmed.ncbi.nlm.nih.gov/35740030/ DOI: 10.3390/antiox11061132
    Complete structured claim and evidence
  5. In human liver S9, AOX inhibition reduced retinoic-acid formation by 20-50%, versus 50-80% with ALDH1A1 inhibition; AOX had lower affinity and higher capacity.

    Experimental context and source evidence
    evidence_span
    {"source_cache": "artifacts/molybdenum-research/33355213.abstract.txt", "locator": "Exact primary indexed abstract; zero-based, end-exclusive Unicode character offsets", "file_sha256": "0edb31bff85231dfbde4a99d6858db611c099d2cd00982cad88616aa960b5aa2", "start_char": 0, "end_char": 2211, "text_sha256": "0edb31bff85231dfbde4a99d6858db611c099d2cd00982cad88616aa960b5aa2"}
    experimental_model
    Recombinant human AOX and human liver S9 kinetics, inhibitors and protein quantification
    exposure
    Retinaldehyde with/without NAD+; selective inhibitors
    limitations
    Ex-vivo contribution depends on substrate and NAD+ availability; no dietary molybdenum intervention or universal in-vivo percentage.
    nutrient_topic
    Molybdenum research collection; topical membership is not evidence of a direct dietary effect. · Molybdenum
    organism
    Homo sapiens
    plain_language
    Different enzymes share vitamin A processing, and their contributions depend on the conditions.
    primary_references
    [mo-p33355213] Aldehyde Oxidase Contributes to All-Trans-Retinoic Acid Biosynthesis in Human Liver. (2021). https://pubmed.ncbi.nlm.nih.gov/33355213/ DOI: 10.1124/dmd.120.000296
    tissue_or_cell_type
    Purified enzyme and liver S9 fractions

    Molybdenum: cofactor assembly, sulfur metabolism and nutrient interactions (2026-09-17) · lines 911–922

    AI-assisted literature curation; primary study URLs and scope retained in the document and extraction. Not publisher full text. · supports · Recombinant human AOX and human liver S9 kinetics, inhibitors and protein quantification · source_derived_draft · unverified_draft

    ### mo-aox-aldh-partition In human liver S9, AOX inhibition reduced retinoic-acid formation by 20-50%, versus 50-80% with ALDH1A1 inhibition; AOX had lower affinity and higher capacity. Condition category: normal nutrient_topic: Molybdenum research collection; topical membership is not evidence of a direct dietary effect. plain_language: Different enzymes share vitamin A processing, and their contributions depend on the conditions. organism: Homo sapiens tissue_or_cell_type: Purified enzyme and liver S9 fractions experimental_model: Recombinant human AOX and human liver S9 kinetics, inhibitors and protein quantification limitations: Ex-vivo contribution depends on substrate and NAD+ availability; no dietary molybdenum intervention or universal in-vivo percentage. exposure: Retinaldehyde with/without NAD+; selective inhibitors evidence_span: {"source_cache": "artifacts/molybdenum-research/33355213.abstract.txt", "locator": "Exact primary indexed abstract; zero-based, end-exclusive Unicode character offsets", "file_sha256": "0edb31bff85231dfbde4a99d6858db611c099d2cd00982cad88616aa960b5aa2", "start_char": 0, "end_char": 2211, "text_sha256": "0edb31bff85231dfbde4a99d6858db611c099d2cd00982cad88616aa960b5aa2"} [mo-p33355213] Aldehyde Oxidase Contributes to All-Trans-Retinoic Acid Biosynthesis in Human Liver. (2021). https://pubmed.ncbi.nlm.nih.gov/33355213/ DOI: 10.1124/dmd.120.000296
    Complete structured claim and evidence
  6. ABCA4 drove ATP-dependent transport of retinal-PE adduct from the disc lumen-facing leaflet toward the cytoplasmic leaflet.

    Experimental context and source evidence
    experimental_model
    Proteoliposomes and native disc transport assays
    limitations
    The assayed substrate is the adduct, not a requirement for free retinal diffusion.
    nutrient_topic
    Vitamin A research collection; topical membership is not evidence of a direct dietary effect. · Vitamin A
    organism
    Bovine/mouse discs; recombinant transporter
    plain_language
    ABCA4 moves the trapped retinal-lipid adduct to the disposal side of the disc.
    primary_references
    [quazi-2012] ABCA4 is an N-retinylidene-phosphatidylethanolamine and phosphatidylethanolamine importer (2012). https://pmc.ncbi.nlm.nih.gov/articles/PMC3871175/ DOI: 10.1038/ncomms1927
    tissue_or_cell_type
    Photoreceptor disc membrane
    transport_direction
    disc lumen leaflet to cytoplasmic leaflet
    transport_effect
    raises Recorded as ATP-dependent transport from the disc lumen-facing leaflet toward the cytoplasmic leaflet.
    transport_pool
    the cytoplasmic leaflet of the disc membrane Recorded as ATP-dependent transport from the disc lumen-facing leaflet toward the cytoplasmic leaflet.

    Vitamin A: forms, mechanisms, deficiency and excess (2026-09-17) · lines 801–811

    AI-assisted literature curation; primary study URLs and scope retained in the document and extraction. Not publisher full text. · supports · Proteoliposomes and native disc transport assays · source_derived_draft · unverified_draft

    ### a-vision-abca4-retinoid-flip ABCA4 drove ATP-dependent transport of retinal-PE adduct from the disc lumen-facing leaflet toward the cytoplasmic leaflet. Condition category: normal nutrient_topic: Vitamin A research collection; topical membership is not evidence of a direct dietary effect. plain_language: ABCA4 moves the trapped retinal-lipid adduct to the disposal side of the disc. organism: Bovine/mouse discs; recombinant transporter tissue_or_cell_type: Photoreceptor disc membrane experimental_model: Proteoliposomes and native disc transport assays limitations: The assayed substrate is the adduct, not a requirement for free retinal diffusion. transport_direction: disc lumen leaflet to cytoplasmic leaflet [quazi-2012] ABCA4 is an N-retinylidene-phosphatidylethanolamine and phosphatidylethanolamine importer (2012). https://pmc.ncbi.nlm.nih.gov/articles/PMC3871175/ DOI: 10.1038/ncomms1927
    Complete structured claim and evidence
  7. Abca4/Rdh8 double-knockout mice developed early RPE/photoreceptor dystrophy in the retinal-clearance study.

    Combined RDH8 and ABCA4 loss → Retinal degeneration source_derived_draftungraded
    Experimental context and source evidence
    availability_state
    machinery_impairment Imported condition classification; unverified.
    experimental_model
    Double-knockout retinoid and retinal phenotype
    limitations
    Light and genetic background influence phenotype; the experiment does not isolate A2E as sole cause.
    nutrient_topic
    Vitamin A research collection; topical membership is not evidence of a direct dietary effect. · Vitamin A
    organism
    Mus musculus
    plain_language
    Removing both disposal routes made the retina vulnerable.
    primary_references
    [maeda-2008] Retinopathy in mice induced by disrupted all-trans-retinal clearance (2008). https://pubmed.ncbi.nlm.nih.gov/18658157/ DOI: 10.1074/jbc.M804505200
    tissue_or_cell_type
    RPE and photoreceptors
    trigger_kind
    machinery_impairment Imported condition classification; unverified.

    Vitamin A: forms, mechanisms, deficiency and excess (2026-09-17) · lines 825–834

    AI-assisted literature curation; primary study URLs and scope retained in the document and extraction. Not publisher full text. · supports · Double-knockout retinoid and retinal phenotype · source_derived_draft · unverified_draft

    ### a-vision-clearance-retinopathy Abca4/Rdh8 double-knockout mice developed early RPE/photoreceptor dystrophy in the retinal-clearance study. Condition category: machinery_impairment nutrient_topic: Vitamin A research collection; topical membership is not evidence of a direct dietary effect. plain_language: Removing both disposal routes made the retina vulnerable. organism: Mus musculus tissue_or_cell_type: RPE and photoreceptors experimental_model: Double-knockout retinoid and retinal phenotype limitations: Light and genetic background influence phenotype; the experiment does not isolate A2E as sole cause. [maeda-2008] Retinopathy in mice induced by disrupted all-trans-retinal clearance (2008). https://pubmed.ncbi.nlm.nih.gov/18658157/ DOI: 10.1074/jbc.M804505200
    Complete structured claim and evidence
  8. Purified human RDH12 used NADPH for retinal reduction and had much lower apparent cofactor Km for NADP(H) than NAD(H).

    NADPH → Retinol dehydrogenase 12 / RDH12 source_derived_draftungraded
    Experimental context and source evidence
    experimental_model
    Purified-enzyme cofactor/substrate kinetics
    limitations
    Biochemical cofactor preference does not demonstrate a dietary niacin-deficiency visual phenotype.
    nutrient_topic
    Vitamin A research collection; topical membership is not evidence of a direct dietary effect. · Vitamin A
    organism
    Homo sapiens protein
    plain_language
    The reductase uses NADPH reducing power to convert retinal into retinol.
    primary_references
    [belyaeva-2005] Biochemical properties of purified human retinol dehydrogenase 12 (RDH12): catalytic efficiency toward retinoids and C9 aldehydes and effects of cellular retinol-binding protein type I (CRBPI) and cellular retinaldehyde-binding protein (CRALBP) on the oxidation and reduction of retinoids (2005). https://pubmed.ncbi.nlm.nih.gov/15865448/ DOI: 10.1021/bi050226k
    tissue_or_cell_type
    Recombinant enzyme preparation

    Vitamin A: forms, mechanisms, deficiency and excess (2026-09-17) · lines 778–787

    AI-assisted literature curation; primary study URLs and scope retained in the document and extraction. Not publisher full text. · supports · Purified-enzyme cofactor/substrate kinetics · source_derived_draft · unverified_draft

    ### a-vision-rdh12-nadph Purified human RDH12 used NADPH for retinal reduction and had much lower apparent cofactor Km for NADP(H) than NAD(H). Condition category: normal nutrient_topic: Vitamin A research collection; topical membership is not evidence of a direct dietary effect. plain_language: The reductase uses NADPH reducing power to convert retinal into retinol. organism: Homo sapiens protein tissue_or_cell_type: Recombinant enzyme preparation experimental_model: Purified-enzyme cofactor/substrate kinetics limitations: Biochemical cofactor preference does not demonstrate a dietary niacin-deficiency visual phenotype. [belyaeva-2005] Biochemical properties of purified human retinol dehydrogenase 12 (RDH12): catalytic efficiency toward retinoids and C9 aldehydes and effects of cellular retinol-binding protein type I (CRBPI) and cellular retinaldehyde-binding protein (CRALBP) on the oxidation and reduction of retinoids (2005). https://pubmed.ncbi.nlm.nih.gov/15865448/ DOI: 10.1021/bi050226k
    Complete structured claim and evidence
  9. Mouse rod imaging identified RDH12-dependent reduction of retinaldehyde entering inner segments from the outer segment or extracellular medium.

    Experimental context and source evidence
    experimental_model
    Knockout rod imaging and exogenous retinal challenge
    limitations
    The inferred protection of organelles is not itself a clinical outcome.
    nutrient_topic
    Vitamin A research collection; topical membership is not evidence of a direct dietary effect. · Vitamin A
    organism
    Mus musculus
    plain_language
    RDH12 helps clear retinal that reaches the cell interior.
    primary_references
    [chen-2012] Reduction of all-trans-retinal in vertebrate rod photoreceptors requires the combined action of RDH8 and RDH12 (2012). https://pubmed.ncbi.nlm.nih.gov/22621924/ DOI: 10.1074/jbc.M112.354514
    tissue_or_cell_type
    Rod inner segment

    Vitamin A: forms, mechanisms, deficiency and excess (2026-09-17) · lines 767–776

    AI-assisted literature curation; primary study URLs and scope retained in the document and extraction. Not publisher full text. · supports · Knockout rod imaging and exogenous retinal challenge · source_derived_draft · unverified_draft

    ### a-vision-rdh12-reduction Mouse rod imaging identified RDH12-dependent reduction of retinaldehyde entering inner segments from the outer segment or extracellular medium. Condition category: normal nutrient_topic: Vitamin A research collection; topical membership is not evidence of a direct dietary effect. plain_language: RDH12 helps clear retinal that reaches the cell interior. organism: Mus musculus tissue_or_cell_type: Rod inner segment experimental_model: Knockout rod imaging and exogenous retinal challenge limitations: The inferred protection of organelles is not itself a clinical outcome. [chen-2012] Reduction of all-trans-retinal in vertebrate rod photoreceptors requires the combined action of RDH8 and RDH12 (2012). https://pubmed.ncbi.nlm.nih.gov/22621924/ DOI: 10.1074/jbc.M112.354514
    Complete structured claim and evidence
  10. Single-cell knockout comparisons showed RDH8 supplies most reduction of bleach-generated all-trans-retinal in mouse rod outer segments.

    Retinol dehydrogenase 8 / RDH8 → All-trans-retinol source_derived_draftungraded
    Experimental context and source evidence
    experimental_model
    Wild-type/Rdh8-null/Rdh12-null rod fluorescence
    limitations
    Residual reductases exist; this does not establish an exclusive enzyme.
    nutrient_topic
    Vitamin A research collection; topical membership is not evidence of a direct dietary effect. · Vitamin A
    organism
    Mus musculus
    plain_language
    RDH8 converts the aldehyde photoproduct back to retinol in the outer segment.
    primary_references
    [chen-2012] Reduction of all-trans-retinal in vertebrate rod photoreceptors requires the combined action of RDH8 and RDH12 (2012). https://pubmed.ncbi.nlm.nih.gov/22621924/ DOI: 10.1074/jbc.M112.354514
    tissue_or_cell_type
    Rod outer segment

    Vitamin A: forms, mechanisms, deficiency and excess (2026-09-17) · lines 756–765

    AI-assisted literature curation; primary study URLs and scope retained in the document and extraction. Not publisher full text. · supports · Wild-type/Rdh8-null/Rdh12-null rod fluorescence · source_derived_draft · unverified_draft

    ### a-vision-rdh8-reduction Single-cell knockout comparisons showed RDH8 supplies most reduction of bleach-generated all-trans-retinal in mouse rod outer segments. Condition category: normal nutrient_topic: Vitamin A research collection; topical membership is not evidence of a direct dietary effect. plain_language: RDH8 converts the aldehyde photoproduct back to retinol in the outer segment. organism: Mus musculus tissue_or_cell_type: Rod outer segment experimental_model: Wild-type/Rdh8-null/Rdh12-null rod fluorescence limitations: Residual reductases exist; this does not establish an exclusive enzyme. [chen-2012] Reduction of all-trans-retinal in vertebrate rod photoreceptors requires the combined action of RDH8 and RDH12 (2012). https://pubmed.ncbi.nlm.nih.gov/22621924/ DOI: 10.1074/jbc.M112.354514
    Complete structured claim and evidence
  11. Human ALDH1A1 oxidized all-trans-retinaldehyde to retinoic acid in comparative enzyme assays.

    Experimental context and source evidence
    evidence_location
    Abstract
    experimental_model
    Side-by-side recombinant human ALDH1A1, ALDH1A2 and ALDH1A3 kinetic assays.
    exposure
    Side-by-side retinaldehyde kinetic measurements by HPLC.
    limitations
    In vitro catalytic efficiency does not specify its contribution in a particular tissue.
    nutrient_topic
    Vitamin A research collection; topical membership is not evidence of a direct dietary effect. · Vitamin A
    organism
    Homo sapiens recombinant protein
    outcome
    Human ALDH1A1 oxidized all-trans-retinaldehyde to retinoic acid in comparative enzyme assays.
    plain_language
    This independently identified enzyme supplies the acid form used for signaling.
    primary_references
    [va-pequerul-2020] Structural and kinetic features of aldehyde dehydrogenase 1A (ALDH1A) subfamily members, cancer stem cell markers active in retinoic acid biosynthesis (2020). https://pubmed.ncbi.nlm.nih.gov/31923393/ DOI: 10.1016/j.abb.2020.108256
    tissue_or_cell_type
    Cell-free enzyme

    Vitamin A: forms, mechanisms, deficiency and excess (2026-09-17) · lines 559–571

    AI-assisted literature curation; primary study URLs and scope retained in the document and extraction. Not publisher full text. · supports · Side-by-side recombinant human ALDH1A1, ALDH1A2 and ALDH1A3 kinetic assays. · source_derived_draft · unverified_draft

    ### va-aldh1a1-retinal-oxidation Human ALDH1A1 oxidized all-trans-retinaldehyde to retinoic acid in comparative enzyme assays. Condition category: normal nutrient_topic: Vitamin A research collection; topical membership is not evidence of a direct dietary effect. plain_language: This independently identified enzyme supplies the acid form used for signaling. organism: Homo sapiens recombinant protein tissue_or_cell_type: Cell-free enzyme experimental_model: Side-by-side recombinant human ALDH1A1, ALDH1A2 and ALDH1A3 kinetic assays. limitations: In vitro catalytic efficiency does not specify its contribution in a particular tissue. exposure: Side-by-side retinaldehyde kinetic measurements by HPLC. outcome: Human ALDH1A1 oxidized all-trans-retinaldehyde to retinoic acid in comparative enzyme assays. evidence_location: Abstract [va-pequerul-2020] Structural and kinetic features of aldehyde dehydrogenase 1A (ALDH1A) subfamily members, cancer stem cell markers active in retinoic acid biosynthesis (2020). https://pubmed.ncbi.nlm.nih.gov/31923393/ DOI: 10.1016/j.abb.2020.108256
    Complete structured claim and evidence
  12. Human ALDH1A2 oxidized all-trans-retinaldehyde to retinoic acid in comparative enzyme assays.

    Experimental context and source evidence
    evidence_location
    Abstract
    experimental_model
    Side-by-side recombinant human ALDH1A1, ALDH1A2 and ALDH1A3 kinetic assays.
    exposure
    Side-by-side retinaldehyde kinetic measurements by HPLC.
    limitations
    In vitro catalytic efficiency does not specify its contribution in a particular tissue.
    nutrient_topic
    Vitamin A research collection; topical membership is not evidence of a direct dietary effect. · Vitamin A
    organism
    Homo sapiens recombinant protein
    outcome
    Human ALDH1A2 oxidized all-trans-retinaldehyde to retinoic acid in comparative enzyme assays.
    plain_language
    This independently identified enzyme supplies the acid form used for signaling.
    primary_references
    [va-pequerul-2020] Structural and kinetic features of aldehyde dehydrogenase 1A (ALDH1A) subfamily members, cancer stem cell markers active in retinoic acid biosynthesis (2020). https://pubmed.ncbi.nlm.nih.gov/31923393/ DOI: 10.1016/j.abb.2020.108256
    tissue_or_cell_type
    Cell-free enzyme

    Vitamin A: forms, mechanisms, deficiency and excess (2026-09-17) · lines 573–585

    AI-assisted literature curation; primary study URLs and scope retained in the document and extraction. Not publisher full text. · supports · Side-by-side recombinant human ALDH1A1, ALDH1A2 and ALDH1A3 kinetic assays. · source_derived_draft · unverified_draft

    ### va-aldh1a2-retinal-oxidation Human ALDH1A2 oxidized all-trans-retinaldehyde to retinoic acid in comparative enzyme assays. Condition category: normal nutrient_topic: Vitamin A research collection; topical membership is not evidence of a direct dietary effect. plain_language: This independently identified enzyme supplies the acid form used for signaling. organism: Homo sapiens recombinant protein tissue_or_cell_type: Cell-free enzyme experimental_model: Side-by-side recombinant human ALDH1A1, ALDH1A2 and ALDH1A3 kinetic assays. limitations: In vitro catalytic efficiency does not specify its contribution in a particular tissue. exposure: Side-by-side retinaldehyde kinetic measurements by HPLC. outcome: Human ALDH1A2 oxidized all-trans-retinaldehyde to retinoic acid in comparative enzyme assays. evidence_location: Abstract [va-pequerul-2020] Structural and kinetic features of aldehyde dehydrogenase 1A (ALDH1A) subfamily members, cancer stem cell markers active in retinoic acid biosynthesis (2020). https://pubmed.ncbi.nlm.nih.gov/31923393/ DOI: 10.1016/j.abb.2020.108256
    Complete structured claim and evidence
  13. Human ALDH1A3 oxidized all-trans-retinaldehyde to retinoic acid in comparative enzyme assays.

    Experimental context and source evidence
    evidence_location
    Abstract
    experimental_model
    Side-by-side recombinant human ALDH1A1, ALDH1A2 and ALDH1A3 kinetic assays.
    exposure
    Side-by-side retinaldehyde kinetic measurements by HPLC.
    limitations
    In vitro catalytic efficiency does not specify its contribution in a particular tissue.
    nutrient_topic
    Vitamin A research collection; topical membership is not evidence of a direct dietary effect. · Vitamin A
    organism
    Homo sapiens recombinant protein
    outcome
    Human ALDH1A3 oxidized all-trans-retinaldehyde to retinoic acid in comparative enzyme assays.
    plain_language
    This independently identified enzyme supplies the acid form used for signaling.
    primary_references
    [va-pequerul-2020] Structural and kinetic features of aldehyde dehydrogenase 1A (ALDH1A) subfamily members, cancer stem cell markers active in retinoic acid biosynthesis (2020). https://pubmed.ncbi.nlm.nih.gov/31923393/ DOI: 10.1016/j.abb.2020.108256
    tissue_or_cell_type
    Cell-free enzyme

    Vitamin A: forms, mechanisms, deficiency and excess (2026-09-17) · lines 587–599

    AI-assisted literature curation; primary study URLs and scope retained in the document and extraction. Not publisher full text. · supports · Side-by-side recombinant human ALDH1A1, ALDH1A2 and ALDH1A3 kinetic assays. · source_derived_draft · unverified_draft

    ### va-aldh1a3-retinal-oxidation Human ALDH1A3 oxidized all-trans-retinaldehyde to retinoic acid in comparative enzyme assays. Condition category: normal nutrient_topic: Vitamin A research collection; topical membership is not evidence of a direct dietary effect. plain_language: This independently identified enzyme supplies the acid form used for signaling. organism: Homo sapiens recombinant protein tissue_or_cell_type: Cell-free enzyme experimental_model: Side-by-side recombinant human ALDH1A1, ALDH1A2 and ALDH1A3 kinetic assays. limitations: In vitro catalytic efficiency does not specify its contribution in a particular tissue. exposure: Side-by-side retinaldehyde kinetic measurements by HPLC. outcome: Human ALDH1A3 oxidized all-trans-retinaldehyde to retinoic acid in comparative enzyme assays. evidence_location: Abstract [va-pequerul-2020] Structural and kinetic features of aldehyde dehydrogenase 1A (ALDH1A) subfamily members, cancer stem cell markers active in retinoic acid biosynthesis (2020). https://pubmed.ncbi.nlm.nih.gov/31923393/ DOI: 10.1016/j.abb.2020.108256
    Complete structured claim and evidence
  14. The 2023 study reported direct radical-trapping activity for retinol, retinal and ATRA alongside ferroptosis protection.

    All-trans-retinoic acid → Lipid radical trapping source_derived_draftungraded
    Experimental context and source evidence
    experimental_model
    Cell-free assay and cell lines.
    limitations
    ATRA direct activity was not reproduced in the 2024 assays; no clinical or nutrient-replacement inference.
    nutrient_topic
    Vitamin A research collection; topical membership is not evidence of a direct dietary effect. · Vitamin A
    organism
    Homo sapiens
    plain_language
    Different vitamin A forms were protective in the tested systems.
    primary_references
    [va-jakaria2023] Vitamin A metabolites inhibit ferroptosis (2023). https://pubmed.ncbi.nlm.nih.gov/37236031/ DOI: 10.1016/j.biopha.2023.114930
    tissue_or_cell_type
    Cell-free chemistry and cell cultures

    Vitamin A: forms, mechanisms, deficiency and excess (2026-09-17) · lines 1789–1798

    AI-assisted literature curation; primary study URLs and scope retained in the document and extraction. Not publisher full text. · supports · Cell-free assay and cell lines. · source_derived_draft · unverified_draft

    ### va-atra-direct-radical-trapping2023 The 2023 study reported direct radical-trapping activity for retinol, retinal and ATRA alongside ferroptosis protection. Condition category: normal nutrient_topic: Vitamin A research collection; topical membership is not evidence of a direct dietary effect. plain_language: Different vitamin A forms were protective in the tested systems. organism: Homo sapiens tissue_or_cell_type: Cell-free chemistry and cell cultures experimental_model: Cell-free assay and cell lines. limitations: ATRA direct activity was not reproduced in the 2024 assays; no clinical or nutrient-replacement inference. [va-jakaria2023] Vitamin A metabolites inhibit ferroptosis (2023). https://pubmed.ncbi.nlm.nih.gov/37236031/ DOI: 10.1016/j.biopha.2023.114930
    Complete structured claim and evidence
  15. ATRA showed no direct activity in AAPH/C11-BODIPY and DPPH assays; retinol and retinal were active in the AAPH assay.

    All-trans-retinoic acid → Lipid radical trapping source_derived_draftungraded
    Experimental context and source evidence
    experimental_model
    Cell-free assays.
    limitations
    Does not establish universal absence of antioxidant chemistry.
    nutrient_topic
    Vitamin A research collection; topical membership is not evidence of a direct dietary effect. · Vitamin A
    organism
    Homo sapiens
    plain_language
    Chemical form and assay conditions matter.
    primary_references
    [va-berndt2024] Suppression of ferroptosis by vitamin A or radical-trapping antioxidants is essential for neuronal development (2024). https://pubmed.ncbi.nlm.nih.gov/39218970/ DOI: 10.1038/s41467-024-51996-1
    tissue_or_cell_type
    Cell-free chemistry

    Vitamin A: forms, mechanisms, deficiency and excess (2026-09-17) · lines 1800–1809

    AI-assisted literature curation; primary study URLs and scope retained in the document and extraction. Not publisher full text. · supports · Cell-free assays. · source_derived_draft · unverified_draft

    ### va-atra-no-direct-radical-trapping2024 ATRA showed no direct activity in AAPH/C11-BODIPY and DPPH assays; retinol and retinal were active in the AAPH assay. Condition category: normal nutrient_topic: Vitamin A research collection; topical membership is not evidence of a direct dietary effect. plain_language: Chemical form and assay conditions matter. organism: Homo sapiens tissue_or_cell_type: Cell-free chemistry experimental_model: Cell-free assays. limitations: Does not establish universal absence of antioxidant chemistry. [va-berndt2024] Suppression of ferroptosis by vitamin A or radical-trapping antioxidants is essential for neuronal development (2024). https://pubmed.ncbi.nlm.nih.gov/39218970/ DOI: 10.1038/s41467-024-51996-1
    Complete structured claim and evidence
  16. RDH10-activated DHRS3 reduced all-trans-retinal to retinol preferentially using NADPH.

    Dehydrogenase/reductase 3 / DHRS3 → All-trans-retinol source_derived_draftungraded
    Experimental context and source evidence
    cross_nutrient
    NADPH supports a retinoid buffering reaction.
    evidence_location
    Figure 5 and Table 1
    experimental_model
    Human RDH10/DHRS3 coexpression in HEK293 and Sf9 cells, plus Dhrs3-null embryos.
    exposure
    DHRS3 coexpressed with RDH10; retinal plus NADPH.
    limitations
    Cofactor dependency is not a dietary niacin intervention.
    nutrient_topic
    Vitamin A research collection; topical membership is not evidence of a direct dietary effect. · Vitamin A
    organism
    Homo sapiens proteins in Sf9 and HEK293 systems
    outcome
    RDH10-activated DHRS3 reduced all-trans-retinal to retinol preferentially using NADPH.
    plain_language
    This reverse step restrains retinal available for acid production.
    primary_references
    [va-adams-2014] The retinaldehyde reductase activity of DHRS3 is reciprocally activated by retinol dehydrogenase 10 to control retinoid homeostasis (2014). https://pmc.ncbi.nlm.nih.gov/articles/PMC4031538/ DOI: 10.1074/jbc.M114.552257
    tissue_or_cell_type
    Microsomal/cellular retinoid system

    Vitamin A: forms, mechanisms, deficiency and excess (2026-09-17) · lines 516–529

    AI-assisted literature curation; primary study URLs and scope retained in the document and extraction. Not publisher full text. · supports · Human RDH10/DHRS3 coexpression in HEK293 and Sf9 cells, plus Dhrs3-null embryos. · source_derived_draft · unverified_draft

    ### va-dhrs3-retinal-reduction RDH10-activated DHRS3 reduced all-trans-retinal to retinol preferentially using NADPH. Condition category: normal nutrient_topic: Vitamin A research collection; topical membership is not evidence of a direct dietary effect. plain_language: This reverse step restrains retinal available for acid production. organism: Homo sapiens proteins in Sf9 and HEK293 systems tissue_or_cell_type: Microsomal/cellular retinoid system experimental_model: Human RDH10/DHRS3 coexpression in HEK293 and Sf9 cells, plus Dhrs3-null embryos. limitations: Cofactor dependency is not a dietary niacin intervention. exposure: DHRS3 coexpressed with RDH10; retinal plus NADPH. outcome: RDH10-activated DHRS3 reduced all-trans-retinal to retinol preferentially using NADPH. evidence_location: Figure 5 and Table 1 cross_nutrient: NADPH supports a retinoid buffering reaction. [va-adams-2014] The retinaldehyde reductase activity of DHRS3 is reciprocally activated by retinol dehydrogenase 10 to control retinoid homeostasis (2014). https://pmc.ncbi.nlm.nih.gov/articles/PMC4031538/ DOI: 10.1074/jbc.M114.552257
    Complete structured claim and evidence
  17. Desferrioxamine reduced beta-carotene-cleaving activity in human intestinal mucosa and TC7 cells.

    Desferrioxamine → Beta-carotene central cleavage source_derived_draftungraded
    Experimental context and source evidence
    availability_state
    machinery_impairment Imported condition classification; unverified.
    cross_nutrient
    Iron availability supports provitamin A cleavage in this in vitro model.
    evidence_location
    Abstract
    experimental_model
    Human small-intestinal mucosa and Caco-2 TC7 cells; desferrioxamine and iron addition.
    exposure
    Increasing desferrioxamine concentrations.
    limitations
    Drug-induced chelation; BCO1 protein abundance and human dietary deficiency were not directly established.
    nutrient_topic
    Vitamin A research collection; topical membership is not evidence of a direct dietary effect. · Vitamin A
    organism
    Homo sapiens
    outcome
    Desferrioxamine reduced beta-carotene-cleaving activity in human intestinal mucosa and TC7 cells.
    plain_language
    Sequestering iron limited conversion of provitamin A to retinal.
    primary_references
    [va-during-2001] beta-Carotene 15,15'-Dioxygenase activity in human tissues and cells: evidence of an iron dependency (2001). https://pubmed.ncbi.nlm.nih.gov/12031257/ DOI: 10.1016/S0955-2863(01)00184-X
    tissue_or_cell_type
    Small-intestinal mucosa and Caco-2 TC7 cells
    trigger_kind
    machinery_impairment Imported condition classification; unverified.

    Vitamin A: forms, mechanisms, deficiency and excess (2026-09-17) · lines 187–200

    AI-assisted literature curation; primary study URLs and scope retained in the document and extraction. Not publisher full text. · supports · Human small-intestinal mucosa and Caco-2 TC7 cells; desferrioxamine and iron addition. · source_derived_draft · unverified_draft

    ### va-iron-chelation-cleavage Desferrioxamine reduced beta-carotene-cleaving activity in human intestinal mucosa and TC7 cells. Condition category: machinery_impairment nutrient_topic: Vitamin A research collection; topical membership is not evidence of a direct dietary effect. plain_language: Sequestering iron limited conversion of provitamin A to retinal. organism: Homo sapiens tissue_or_cell_type: Small-intestinal mucosa and Caco-2 TC7 cells experimental_model: Human small-intestinal mucosa and Caco-2 TC7 cells; desferrioxamine and iron addition. limitations: Drug-induced chelation; BCO1 protein abundance and human dietary deficiency were not directly established. exposure: Increasing desferrioxamine concentrations. outcome: Desferrioxamine reduced beta-carotene-cleaving activity in human intestinal mucosa and TC7 cells. evidence_location: Abstract cross_nutrient: Iron availability supports provitamin A cleavage in this in vitro model. [va-during-2001] beta-Carotene 15,15'-Dioxygenase activity in human tissues and cells: evidence of an iron dependency (2001). https://pubmed.ncbi.nlm.nih.gov/12031257/ DOI: 10.1016/S0955-2863(01)00184-X
    Complete structured claim and evidence
  18. Silencing endogenous RDH10 reduced retinoic-acid production from retinol in human cells.

    Experimental context and source evidence
    availability_state
    machinery_impairment Imported condition classification; unverified.
    evidence_location
    Experimental Procedures: siRNA-mediated Knockdowns; Results: endogenous SDR silencing
    experimental_model
    Human RDH10 in Sf9 microsomes and siRNA perturbation in human cells.
    exposure
    RDH10 siRNA at 100 nanomolar, two transfections 24 hours apart; 10 micromolar retinol for 24 hours after silencing.
    limitations
    Residual activity and other enzymes prevent an exclusive RDH10 interpretation.
    nutrient_topic
    Vitamin A research collection; topical membership is not evidence of a direct dietary effect. · Vitamin A
    organism
    Homo sapiens
    outcome
    Silencing endogenous RDH10 reduced retinoic-acid production from retinol in human cells.
    plain_language
    Reducing precursor oxidation lowered downstream active retinoid production.
    primary_references
    [va-belyaeva-2008] Kinetic Analysis of Human Enzyme RDH10 Defines the Characteristics of a Physiologically Relevant Retinol Dehydrogenase (2008). https://pmc.ncbi.nlm.nih.gov/articles/PMC2459273/ DOI: 10.1074/jbc.M800019200
    tissue_or_cell_type
    HEK293 cells
    trigger_kind
    machinery_impairment Imported condition classification; unverified.

    Vitamin A: forms, mechanisms, deficiency and excess (2026-09-17) · lines 502–514

    AI-assisted literature curation; primary study URLs and scope retained in the document and extraction. Not publisher full text. · supports · Human RDH10 in Sf9 microsomes and siRNA perturbation in human cells. · source_derived_draft · unverified_draft

    ### va-rdh10-silencing-ra Silencing endogenous RDH10 reduced retinoic-acid production from retinol in human cells. Condition category: machinery_impairment nutrient_topic: Vitamin A research collection; topical membership is not evidence of a direct dietary effect. plain_language: Reducing precursor oxidation lowered downstream active retinoid production. organism: Homo sapiens tissue_or_cell_type: HEK293 cells experimental_model: Human RDH10 in Sf9 microsomes and siRNA perturbation in human cells. limitations: Residual activity and other enzymes prevent an exclusive RDH10 interpretation. exposure: RDH10 siRNA at 100 nanomolar, two transfections 24 hours apart; 10 micromolar retinol for 24 hours after silencing. outcome: Silencing endogenous RDH10 reduced retinoic-acid production from retinol in human cells. evidence_location: Experimental Procedures: siRNA-mediated Knockdowns; Results: endogenous SDR silencing [va-belyaeva-2008] Kinetic Analysis of Human Enzyme RDH10 Defines the Characteristics of a Physiologically Relevant Retinol Dehydrogenase (2008). https://pmc.ncbi.nlm.nih.gov/articles/PMC2459273/ DOI: 10.1074/jbc.M800019200
    Complete structured claim and evidence
  19. The same zinc-deficient rats showed increased retinal oxidase activity, with no detected REH/ARAT activity changes.

    Zinc → Hepatic retinal oxidase activity source_derived_draftungraded
    Experimental context and source evidence
    availability_state
    nutrient_deficiency Imported condition classification; unverified.
    experimental_model
    Same hepatic activity assays.
    limitations
    Activity is not whole-body flux or proof of a direct zinc-binding requirement.
    nutrient_topic
    Vitamin A research collection; topical membership is not evidence of a direct dietary effect. · Vitamin A
    organism
    Rattus norvegicus
    plain_language
    Vitamin A processing did not simply stop at every step.
    primary_references
    [va-kim1988] Effect of zinc deficiency on hepatic enzymes regulating vitamin A status (1988). https://pubmed.ncbi.nlm.nih.gov/3404291/ DOI: 10.1093/jn/118.8.995
    tissue_or_cell_type
    Liver
    trigger_kind
    nutrient_deficiency Imported condition classification; unverified.

    Vitamin A: forms, mechanisms, deficiency and excess (2026-09-17) · lines 1531–1540

    AI-assisted literature curation; primary study URLs and scope retained in the document and extraction. Not publisher full text. · supports · Same hepatic activity assays. · source_derived_draft · unverified_draft

    ### va-zinc-deficiency-retinal-oxidation-increase The same zinc-deficient rats showed increased retinal oxidase activity, with no detected REH/ARAT activity changes. Condition category: nutrient_deficiency nutrient_topic: Vitamin A research collection; topical membership is not evidence of a direct dietary effect. plain_language: Vitamin A processing did not simply stop at every step. organism: Rattus norvegicus tissue_or_cell_type: Liver experimental_model: Same hepatic activity assays. limitations: Activity is not whole-body flux or proof of a direct zinc-binding requirement. [va-kim1988] Effect of zinc deficiency on hepatic enzymes regulating vitamin A status (1988). https://pubmed.ncbi.nlm.nih.gov/3404291/ DOI: 10.1093/jn/118.8.995
    Complete structured claim and evidence

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