Component
Human activating transcription factor 4 / ATF4
Human activating transcription factor 4 / ATF4. Species, exposure and limitations are retained in each linked claim.
12 recorded relationships. Experimental role, claim status and evidence remain attached to each record.
How nutrients influence it
Every nutrient with a recorded effect on this component, credited to the nutrient that acted rather than the chapter that recorded it. Open a nutrient to see the findings and the conditions they were measured under.
Other things that act on it
Enzymes, hormones, genes, and other components with a recorded effect. These are not nutrients, so they do not count toward the arrows above. Each finding names the chapter that recorded it.
How nutrients reach it in more than one step
Chains of two or more recorded steps that end here, grouped by the nutrient they start from. Each step is a separate finding, so a chain is a route a mechanism could take, not proof that it does.
Tracing routes…
What it does
Every recorded relationship this component is part of, grouped by its role. Plain wording comes first; the technical statement follows.
What it acts on
ATF4-responsive promoter elements supported human CHAC1 transcription in reporter experiments.
Experimental context and source evidence
- evidence_span
- {"source_cache": "artifacts/glutathione-research/25931127.abstract.txt", "locator": "Primary indexed abstract; zero-based, end-exclusive Unicode character offsets", "file_sha256": "a561d11e802b38659805fe90dcab499bf0f434dbe91fa5510cf1eb4efb3460b1", "start_char": 0, "end_char": 1504, "text_sha256": "a561d11e802b38659805fe90dcab499bf0f434dbe91fa5510cf1eb4efb3460b1"}
- experimental_model
- Human promoter reporters, binding assays and overexpression
- exposure
- ER stress, ATF4 and CHAC1 expression
- limitations
- Cell experiments; CHAC1 induction is not a dietary GSH-deficiency diagnosis.
- nutrient_topic
- Glutathione research collection; topical membership is not evidence of a direct dietary effect. · GSH
- organism
- Human
- plain_language
- A stress-response factor can turn on glutathione breakdown.
- primary_references
- [glutathione-p25931127] Human CHAC1 Protein Degrades Glutathione, and mRNA Induction Is Regulated by the Transcription Factors ATF4 and ATF3 and a Bipartite ATF/CRE Regulatory Element. (2015). https://pubmed.ncbi.nlm.nih.gov/25931127/ DOI: 10.1074/jbc.m114.635144
- tissue_or_cell_type
- HEK293 and U2OS cells
Glutathione: metabolism, signaling and nutrient connections (2026-09-17) · lines 567–578
AI-assisted literature curation; primary study URLs and scope retained in the document and extraction. Not publisher full text. · supports · Human promoter reporters, binding assays and overexpression · source_derived_draft · unverified_draft
### glutathione-atf4-chac1 ATF4-responsive promoter elements supported human CHAC1 transcription in reporter experiments. Condition category: normal nutrient_topic: Glutathione research collection; topical membership is not evidence of a direct dietary effect. plain_language: A stress-response factor can turn on glutathione breakdown. organism: Human tissue_or_cell_type: HEK293 and U2OS cells experimental_model: Human promoter reporters, binding assays and overexpression limitations: Cell experiments; CHAC1 induction is not a dietary GSH-deficiency diagnosis. exposure: ER stress, ATF4 and CHAC1 expression evidence_span: {"source_cache": "artifacts/glutathione-research/25931127.abstract.txt", "locator": "Primary indexed abstract; zero-based, end-exclusive Unicode character offsets", "file_sha256": "a561d11e802b38659805fe90dcab499bf0f434dbe91fa5510cf1eb4efb3460b1", "start_char": 0, "end_char": 1504, "text_sha256": "a561d11e802b38659805fe90dcab499bf0f434dbe91fa5510cf1eb4efb3460b1"} [glutathione-p25931127] Human CHAC1 Protein Degrades Glutathione, and mRNA Induction Is Regulated by the Transcription Factors ATF4 and ATF3 and a Bipartite ATF/CRE Regulatory Element. (2015). https://pubmed.ncbi.nlm.nih.gov/25931127/ DOI: 10.1074/jbc.m114.635144
Complete structured claim and evidenceATF4 activation restored metastatic potential in A39-deficient experimental cells.
Experimental context and source evidence
- evidence_span
- {"source_cache": "artifacts/glutathione-research/40736010.abstract.txt", "locator": "Primary indexed abstract; zero-based, end-exclusive Unicode character offsets", "file_sha256": "6c5baf25f027a65c991f7d45f87238cad1e474e7e910dceb32aa78a108e6d29e", "start_char": 0, "end_char": 1513, "text_sha256": "6c5baf25f027a65c991f7d45f87238cad1e474e7e910dceb32aa78a108e6d29e"}
- experimental_model
- Genetic screens, cancer models and patient-derived xenografts
- exposure
- SLC25A39 loss and ATF4 CRISPR activation
- limitations
- Cancer-specific mechanism; no inference that dietary or supplemental GSH causes metastasis in people.
- nutrient_topic
- Glutathione research collection; topical membership is not evidence of a direct dietary effect. · GSH
- organism
- Experimental breast-cancer cells and mouse xenografts
- plain_language
- A stress-response pathway provided a bypass in these models.
- primary_references
- [glutathione-p40736010] Mitochondrial Glutathione Import Enables Breast Cancer Metastasis via Integrated Stress Response Signaling. (2025). https://pubmed.ncbi.nlm.nih.gov/40736010/ DOI: 10.1158/2159-8290.cd-24-1556
- tissue_or_cell_type
- Early lung metastatic colonization
Glutathione: metabolism, signaling and nutrient connections (2026-09-17) · lines 1347–1358
AI-assisted literature curation; primary study URLs and scope retained in the document and extraction. Not publisher full text. · supports · Genetic screens, cancer models and patient-derived xenografts · source_derived_draft · unverified_draft
### glutathione-atf4-metastasis-rescue ATF4 activation restored metastatic potential in A39-deficient experimental cells. Condition category: normal nutrient_topic: Glutathione research collection; topical membership is not evidence of a direct dietary effect. plain_language: A stress-response pathway provided a bypass in these models. organism: Experimental breast-cancer cells and mouse xenografts tissue_or_cell_type: Early lung metastatic colonization experimental_model: Genetic screens, cancer models and patient-derived xenografts limitations: Cancer-specific mechanism; no inference that dietary or supplemental GSH causes metastasis in people. exposure: SLC25A39 loss and ATF4 CRISPR activation evidence_span: {"source_cache": "artifacts/glutathione-research/40736010.abstract.txt", "locator": "Primary indexed abstract; zero-based, end-exclusive Unicode character offsets", "file_sha256": "6c5baf25f027a65c991f7d45f87238cad1e474e7e910dceb32aa78a108e6d29e", "start_char": 0, "end_char": 1513, "text_sha256": "6c5baf25f027a65c991f7d45f87238cad1e474e7e910dceb32aa78a108e6d29e"} [glutathione-p40736010] Mitochondrial Glutathione Import Enables Breast Cancer Metastasis via Integrated Stress Response Signaling. (2025). https://pubmed.ncbi.nlm.nih.gov/40736010/ DOI: 10.1158/2159-8290.cd-24-1556
Complete structured claim and evidence
What acts on it
ABCB7 knockdown did not similarly impair the tested CCCP-induced ISR.
Experimental context and source evidence
- access_level
- selected_indexed_full_text_passages
- dose
- Unresolved; not inferred from another panel
- duration
- 72-hour siRNA; CCCP during final 16 hours
- endpoint
- ATF4/ISR immunoblot readout
- evidence_cache
- artifacts/discovery-research/round2-sources/iscu-counterevidence-search.json; SHA256 91e6dd454b1fdecf0cf4d29d2579bf1eba148109e446059f91ea966f8bf0de21
- experimental_model
- HeLa
- exposure
- CCCP concentration unresolved
- limitations
- Selected primary Results and figure legends accessed through indexed text. Supplements were not independently inspected. These results constrain a hypothesis; they do not test SLC25A39 loss or establish its bypass. Exact iron sensor and transporter substrate remain unresolved.
- organism
- Human
- primary_locator
- https://pmc.ncbi.nlm.nih.gov/articles/PMC10329284/ Figure 6I/J
- primary_references
- https://doi.org/10.1016/j.molcel.2023.05.031
Requirements for iron-triggered DELE1 signaling · lines 34–45
Primary study 10.1016/j.molcel.2023.05.031; targeted counterevidence curation, 2026-09-20. · supports · HeLa · source_derived_draft · unverified_draft
ABCB7 knockdown did not similarly impair the tested CCCP-induced ISR. primary_references: https://doi.org/10.1016/j.molcel.2023.05.031 primary_locator: https://pmc.ncbi.nlm.nih.gov/articles/PMC10329284/ Figure 6I/J evidence_cache: artifacts/discovery-research/round2-sources/iscu-counterevidence-search.json; SHA256 91e6dd454b1fdecf0cf4d29d2579bf1eba148109e446059f91ea966f8bf0de21 access_level: selected_indexed_full_text_passages organism: Human experimental_model: HeLa duration: 72-hour siRNA; CCCP during final 16 hours exposure: CCCP concentration unresolved dose: Unresolved; not inferred from another panel endpoint: ATF4/ISR immunoblot readout limitations: Selected primary Results and figure legends accessed through indexed text. Supplements were not independently inspected. These results constrain a hypothesis; they do not test SLC25A39 loss or establish its bypass. Exact iron sensor and transporter substrate remain unresolved.
Complete structured claim and evidenceABCB7 knockdown attenuated iron-chelator-induced ATF4 expression.
Experimental context and source evidence
- access_level
- selected_indexed_full_text_passages
- dose
- Unresolved; not inferred from another panel
- duration
- 72-hour siRNA; chelator during final 16 hours
- endpoint
- ATF4/ISR immunoblot readout
- evidence_cache
- artifacts/discovery-research/round2-sources/iscu-counterevidence-search.json; SHA256 91e6dd454b1fdecf0cf4d29d2579bf1eba148109e446059f91ea966f8bf0de21
- experimental_model
- HeLa
- exposure
- DFO or DFP; concentrations unresolved
- limitations
- Selected primary Results and figure legends accessed through indexed text. Supplements were not independently inspected. These results constrain a hypothesis; they do not test SLC25A39 loss or establish its bypass. Exact iron sensor and transporter substrate remain unresolved.
- organism
- Human
- primary_locator
- https://pmc.ncbi.nlm.nih.gov/articles/PMC10329284/ Figure 6I/J
- primary_references
- https://doi.org/10.1016/j.molcel.2023.05.031
Requirements for iron-triggered DELE1 signaling · lines 6–17
Primary study 10.1016/j.molcel.2023.05.031; targeted counterevidence curation, 2026-09-20. · supports · HeLa · source_derived_draft · unverified_draft
ABCB7 knockdown attenuated iron-chelator-induced ATF4 expression. primary_references: https://doi.org/10.1016/j.molcel.2023.05.031 primary_locator: https://pmc.ncbi.nlm.nih.gov/articles/PMC10329284/ Figure 6I/J evidence_cache: artifacts/discovery-research/round2-sources/iscu-counterevidence-search.json; SHA256 91e6dd454b1fdecf0cf4d29d2579bf1eba148109e446059f91ea966f8bf0de21 access_level: selected_indexed_full_text_passages organism: Human experimental_model: HeLa duration: 72-hour siRNA; chelator during final 16 hours exposure: DFO or DFP; concentrations unresolved dose: Unresolved; not inferred from another panel endpoint: ATF4/ISR immunoblot readout limitations: Selected primary Results and figure legends accessed through indexed text. Supplements were not independently inspected. These results constrain a hypothesis; they do not test SLC25A39 loss or establish its bypass. Exact iron sensor and transporter substrate remain unresolved.
Complete structured claim and evidenceISCU depletion attenuated iron-chelation-induced ISR activation.
Experimental context and source evidence
- access_level
- selected_indexed_full_text_passages
- dose
- Unresolved; not inferred from another panel
- duration
- 72-hour siRNA reported; exact supplementary exposure schedule unresolved
- endpoint
- ATF4/ISR immunoblot readout
- evidence_cache
- artifacts/discovery-research/round2-sources/iscu-counterevidence-search.json; SHA256 91e6dd454b1fdecf0cf4d29d2579bf1eba148109e446059f91ea966f8bf0de21
- experimental_model
- Human cultured cells; precise supplementary-panel cell assignment unresolved
- exposure
- Iron chelation; panel-specific agent and concentration unresolved
- limitations
- Selected primary Results and figure legends accessed through indexed text. Supplements were not independently inspected. These results constrain a hypothesis; they do not test SLC25A39 loss or establish its bypass. Exact iron sensor and transporter substrate remain unresolved.
- organism
- Human
- primary_locator
- https://pmc.ncbi.nlm.nih.gov/articles/PMC10329284/ Results discussing Figure S6B/C
- primary_references
- https://doi.org/10.1016/j.molcel.2023.05.031
Requirements for iron-triggered DELE1 signaling · lines 48–59
Primary study 10.1016/j.molcel.2023.05.031; targeted counterevidence curation, 2026-09-20. · supports · Human cultured cells; precise supplementary-panel cell assignment unresolved · source_derived_draft · unverified_draft
ISCU depletion attenuated iron-chelation-induced ISR activation. primary_references: https://doi.org/10.1016/j.molcel.2023.05.031 primary_locator: https://pmc.ncbi.nlm.nih.gov/articles/PMC10329284/ Results discussing Figure S6B/C evidence_cache: artifacts/discovery-research/round2-sources/iscu-counterevidence-search.json; SHA256 91e6dd454b1fdecf0cf4d29d2579bf1eba148109e446059f91ea966f8bf0de21 access_level: selected_indexed_full_text_passages organism: Human experimental_model: Human cultured cells; precise supplementary-panel cell assignment unresolved duration: 72-hour siRNA reported; exact supplementary exposure schedule unresolved exposure: Iron chelation; panel-specific agent and concentration unresolved dose: Unresolved; not inferred from another panel endpoint: ATF4/ISR immunoblot readout limitations: Selected primary Results and figure legends accessed through indexed text. Supplements were not independently inspected. These results constrain a hypothesis; they do not test SLC25A39 loss or establish its bypass. Exact iron sensor and transporter substrate remain unresolved.
Complete structured claim and evidenceSLC25A39 knockout attenuated hypoxic ATF4 induction in MDA-MB-231 cells.
Experimental context and source evidence
- access_level
- selected_indexed_full_text_passages
- evidence_cache
- artifacts/discovery-research/round2-sources/primary-mechanism-passages.json; SHA256 81c0207494f0b2a22fd0af0d70528a5114dfd74367dd99f967f4ada68c53e8c3
- experimental_model
- MDA-MB-231
- exposure
- 1% oxygen; 12/24 hours
- limitations
- Selected indexed primary full-text passages reviewed; supplements not independently inspected in this round. These records do not demonstrate iron-chelation rescue of SLC25A39 loss, clinical benefit, or transfer to pulmonary endothelium.
- organism
- Human cultured cells; mouse xenograft host only for colonization endpoint
- plain_language
- SLC25A39 knockout attenuated hypoxic ATF4 induction in MDA-MB-231 cells.
- primary_locator
- https://pmc.ncbi.nlm.nih.gov/articles/PMC12396134/ Figure 4E
- primary_references
- https://doi.org/10.1158/2159-8290.CD-24-1556
DELE1 bridge: iron sensing and mitochondrial-glutathione-dependent stress signaling · lines 31–40
Targeted primary-literature curation; selected indexed full-text passages, 2026-09-20. · supports · MDA-MB-231 · source_derived_draft · unverified_draft
SLC25A39 knockout attenuated hypoxic ATF4 induction in MDA-MB-231 cells. primary_references: https://doi.org/10.1158/2159-8290.CD-24-1556 primary_locator: https://pmc.ncbi.nlm.nih.gov/articles/PMC12396134/ Figure 4E evidence_cache: artifacts/discovery-research/round2-sources/primary-mechanism-passages.json; SHA256 81c0207494f0b2a22fd0af0d70528a5114dfd74367dd99f967f4ada68c53e8c3 access_level: selected_indexed_full_text_passages experimental_model: MDA-MB-231 organism: Human cultured cells; mouse xenograft host only for colonization endpoint exposure: 1% oxygen; 12/24 hours limitations: Selected indexed primary full-text passages reviewed; supplements not independently inspected in this round. These records do not demonstrate iron-chelation rescue of SLC25A39 loss, clinical benefit, or transfer to pulmonary endothelium. plain_language: SLC25A39 knockout attenuated hypoxic ATF4 induction in MDA-MB-231 cells.
Complete structured claim and evidenceDELE1 knockout suppressed iron-chelation-induced ATF4 activation.
Experimental context and source evidence
- access_level
- selected_indexed_full_text_passages
- evidence_cache
- artifacts/discovery-research/round2-sources/primary-mechanism-passages.json; SHA256 81c0207494f0b2a22fd0af0d70528a5114dfd74367dd99f967f4ada68c53e8c3
- experimental_model
- HEK293-derived knockout clones 24/51
- exposure
- 16 hours; DFP 1 mM in its arm; DFO concentration unresolved
- limitations
- Selected indexed primary full-text passages reviewed; supplements not independently inspected in this round. These records do not demonstrate iron-chelation rescue of SLC25A39 loss, clinical benefit, or transfer to pulmonary endothelium.
- organism
- Human cultured cells; mouse xenograft host only for colonization endpoint
- plain_language
- DELE1 knockout suppressed iron-chelation-induced ATF4 activation.
- primary_locator
- https://pmc.ncbi.nlm.nih.gov/articles/PMC10329284/ Figure 4H
- primary_references
- https://doi.org/10.1016/j.molcel.2023.05.031
DELE1 bridge: iron sensing and mitochondrial-glutathione-dependent stress signaling · lines 103–112
Targeted primary-literature curation; selected indexed full-text passages, 2026-09-20. · supports · HEK293-derived knockout clones 24/51 · source_derived_draft · unverified_draft
DELE1 knockout suppressed iron-chelation-induced ATF4 activation. primary_references: https://doi.org/10.1016/j.molcel.2023.05.031 primary_locator: https://pmc.ncbi.nlm.nih.gov/articles/PMC10329284/ Figure 4H evidence_cache: artifacts/discovery-research/round2-sources/primary-mechanism-passages.json; SHA256 81c0207494f0b2a22fd0af0d70528a5114dfd74367dd99f967f4ada68c53e8c3 access_level: selected_indexed_full_text_passages experimental_model: HEK293-derived knockout clones 24/51 organism: Human cultured cells; mouse xenograft host only for colonization endpoint exposure: 16 hours; DFP 1 mM in its arm; DFO concentration unresolved limitations: Selected indexed primary full-text passages reviewed; supplements not independently inspected in this round. These records do not demonstrate iron-chelation rescue of SLC25A39 loss, clinical benefit, or transfer to pulmonary endothelium. plain_language: DELE1 knockout suppressed iron-chelation-induced ATF4 activation.
Complete structured claim and evidenceDELE1 overexpression increased ATF4 in MDA-MB-231 and HCC1806-LM2 cells.
Experimental context and source evidence
- access_level
- selected_indexed_full_text_passages
- evidence_cache
- artifacts/discovery-research/round2-sources/primary-mechanism-passages.json; SHA256 81c0207494f0b2a22fd0af0d70528a5114dfd74367dd99f967f4ada68c53e8c3
- experimental_model
- MDA-MB-231; HCC1806-LM2
- exposure
- Overexpression; amount and duration unresolved
- limitations
- Selected indexed primary full-text passages reviewed; supplements not independently inspected in this round. These records do not demonstrate iron-chelation rescue of SLC25A39 loss, clinical benefit, or transfer to pulmonary endothelium.
- organism
- Human cultured cells; mouse xenograft host only for colonization endpoint
- plain_language
- DELE1 overexpression increased ATF4 in MDA-MB-231 and HCC1806-LM2 cells.
- primary_locator
- https://pmc.ncbi.nlm.nih.gov/articles/PMC12396134/ Figure 4C
- primary_references
- https://doi.org/10.1158/2159-8290.CD-24-1556
DELE1 bridge: iron sensing and mitochondrial-glutathione-dependent stress signaling · lines 7–16
Targeted primary-literature curation; selected indexed full-text passages, 2026-09-20. · supports · MDA-MB-231; HCC1806-LM2 · source_derived_draft · unverified_draft
DELE1 overexpression increased ATF4 in MDA-MB-231 and HCC1806-LM2 cells. primary_references: https://doi.org/10.1158/2159-8290.CD-24-1556 primary_locator: https://pmc.ncbi.nlm.nih.gov/articles/PMC12396134/ Figure 4C evidence_cache: artifacts/discovery-research/round2-sources/primary-mechanism-passages.json; SHA256 81c0207494f0b2a22fd0af0d70528a5114dfd74367dd99f967f4ada68c53e8c3 access_level: selected_indexed_full_text_passages experimental_model: MDA-MB-231; HCC1806-LM2 organism: Human cultured cells; mouse xenograft host only for colonization endpoint exposure: Overexpression; amount and duration unresolved limitations: Selected indexed primary full-text passages reviewed; supplements not independently inspected in this round. These records do not demonstrate iron-chelation rescue of SLC25A39 loss, clinical benefit, or transfer to pulmonary endothelium. plain_language: DELE1 overexpression increased ATF4 in MDA-MB-231 and HCC1806-LM2 cells.
Complete structured claim and evidenceHRI knockdown suppressed iron-chelator-induced ISR activation.
Experimental context and source evidence
- access_level
- selected_indexed_full_text_passages
- evidence_cache
- artifacts/discovery-research/round2-sources/primary-mechanism-passages.json; SHA256 81c0207494f0b2a22fd0af0d70528a5114dfd74367dd99f967f4ada68c53e8c3
- experimental_model
- HeLa
- exposure
- DFO/DFP; final 16 hours after 72-hour siRNA experiment
- limitations
- Selected indexed primary full-text passages reviewed; supplements not independently inspected in this round. These records do not demonstrate iron-chelation rescue of SLC25A39 loss, clinical benefit, or transfer to pulmonary endothelium.
- organism
- Human cultured cells; mouse xenograft host only for colonization endpoint
- plain_language
- HRI knockdown suppressed iron-chelator-induced ISR activation.
- primary_locator
- https://pmc.ncbi.nlm.nih.gov/articles/PMC10329284/ Figure 4G; S3C/D
- primary_references
- https://doi.org/10.1016/j.molcel.2023.05.031
DELE1 bridge: iron sensing and mitochondrial-glutathione-dependent stress signaling · lines 79–88
Targeted primary-literature curation; selected indexed full-text passages, 2026-09-20. · supports · HeLa · source_derived_draft · unverified_draft
HRI knockdown suppressed iron-chelator-induced ISR activation. primary_references: https://doi.org/10.1016/j.molcel.2023.05.031 primary_locator: https://pmc.ncbi.nlm.nih.gov/articles/PMC10329284/ Figure 4G; S3C/D evidence_cache: artifacts/discovery-research/round2-sources/primary-mechanism-passages.json; SHA256 81c0207494f0b2a22fd0af0d70528a5114dfd74367dd99f967f4ada68c53e8c3 access_level: selected_indexed_full_text_passages experimental_model: HeLa organism: Human cultured cells; mouse xenograft host only for colonization endpoint exposure: DFO/DFP; final 16 hours after 72-hour siRNA experiment limitations: Selected indexed primary full-text passages reviewed; supplements not independently inspected in this round. These records do not demonstrate iron-chelation rescue of SLC25A39 loss, clinical benefit, or transfer to pulmonary endothelium. plain_language: HRI knockdown suppressed iron-chelator-induced ISR activation.
Complete structured claim and evidenceOMA1 knockdown did not suppress the tested iron-chelation-induced ISR.
Experimental context and source evidence
- access_level
- selected_indexed_full_text_passages
- evidence_cache
- artifacts/discovery-research/round2-sources/primary-mechanism-passages.json; SHA256 81c0207494f0b2a22fd0af0d70528a5114dfd74367dd99f967f4ada68c53e8c3
- experimental_model
- HEK293T; HeLa
- exposure
- DFO/DFP; exact panel dose/time unresolved
- limitations
- Selected indexed primary full-text passages reviewed; supplements not independently inspected in this round. These records do not demonstrate iron-chelation rescue of SLC25A39 loss, clinical benefit, or transfer to pulmonary endothelium.
- organism
- Human cultured cells; mouse xenograft host only for colonization endpoint
- plain_language
- OMA1 knockdown did not suppress the tested iron-chelation-induced ISR.
- primary_locator
- https://pmc.ncbi.nlm.nih.gov/articles/PMC10329284/ Figure 5C/D
- primary_references
- https://doi.org/10.1016/j.molcel.2023.05.031
DELE1 bridge: iron sensing and mitochondrial-glutathione-dependent stress signaling · lines 91–100
Targeted primary-literature curation; selected indexed full-text passages, 2026-09-20. · supports · HEK293T; HeLa · source_derived_draft · unverified_draft
OMA1 knockdown did not suppress the tested iron-chelation-induced ISR. primary_references: https://doi.org/10.1016/j.molcel.2023.05.031 primary_locator: https://pmc.ncbi.nlm.nih.gov/articles/PMC10329284/ Figure 5C/D evidence_cache: artifacts/discovery-research/round2-sources/primary-mechanism-passages.json; SHA256 81c0207494f0b2a22fd0af0d70528a5114dfd74367dd99f967f4ada68c53e8c3 access_level: selected_indexed_full_text_passages experimental_model: HEK293T; HeLa organism: Human cultured cells; mouse xenograft host only for colonization endpoint exposure: DFO/DFP; exact panel dose/time unresolved limitations: Selected indexed primary full-text passages reviewed; supplements not independently inspected in this round. These records do not demonstrate iron-chelation rescue of SLC25A39 loss, clinical benefit, or transfer to pulmonary endothelium. plain_language: OMA1 knockdown did not suppress the tested iron-chelation-induced ISR.
Complete structured claim and evidenceBoric acid increased ATF4 protein at one hour in DU-145 cells.
Experimental context and source evidence
- evidence_span
- {"source_cache": "artifacts/boron-research/27587023.abstract.txt", "locator": "Exact primary indexed abstract; zero-based, end-exclusive Unicode character offsets", "file_sha256": "421c3ea56e2b1058bb780928a63bb648246560a0ba3a070d82dc3fdd37ff0725", "start_char": 0, "end_char": 1886, "text_sha256": "421c3ea56e2b1058bb780928a63bb648246560a0ba3a070d82dc3fdd37ff0725"}
- experimental_model
- Time-course immunoblotting and ER-stress gene expression
- exposure
- 10 µM boric acid; early time points from 30 minutes
- limitations
- Expression changes do not establish direct molecular targets or clinical effects. Total eIF2α abundance is distinct from Ser51 phosphorylation. The study did not activate every ER-stress branch.
- nutrient_topic
- Boron research collection; topical membership is not evidence of a direct dietary effect. · Boron
- organism
- Human DU-145 cells
- plain_language
- A regulator of the cellular stress response increased.
- primary_references
- [boron-p27587023] Activation of the EIF2α/ATF4 and ATF6 Pathways in DU-145 Cells by Boric Acid at the Concentration Reported in Men at the US Mean Boron Intake. (2017). https://pubmed.ncbi.nlm.nih.gov/27587023/ DOI: 10.1007/s12011-016-0824-y
- tissue_or_cell_type
- Prostate cancer cell culture
Boron: chemistry, nutrient interactions, low-intake studies and mechanistic uncertainties (2026-09-17) · lines 391–402
AI-assisted literature curation; primary study URLs and scope retained in the document and extraction. Not publisher full text. · supports · Time-course immunoblotting and ER-stress gene expression · source_derived_draft · unverified_draft
### boron-atf4-abundance Boric acid increased ATF4 protein at one hour in DU-145 cells. Condition category: normal nutrient_topic: Boron research collection; topical membership is not evidence of a direct dietary effect. plain_language: A regulator of the cellular stress response increased. organism: Human DU-145 cells tissue_or_cell_type: Prostate cancer cell culture experimental_model: Time-course immunoblotting and ER-stress gene expression limitations: Expression changes do not establish direct molecular targets or clinical effects. Total eIF2α abundance is distinct from Ser51 phosphorylation. The study did not activate every ER-stress branch. exposure: 10 µM boric acid; early time points from 30 minutes evidence_span: {"source_cache": "artifacts/boron-research/27587023.abstract.txt", "locator": "Exact primary indexed abstract; zero-based, end-exclusive Unicode character offsets", "file_sha256": "421c3ea56e2b1058bb780928a63bb648246560a0ba3a070d82dc3fdd37ff0725", "start_char": 0, "end_char": 1886, "text_sha256": "421c3ea56e2b1058bb780928a63bb648246560a0ba3a070d82dc3fdd37ff0725"} [boron-p27587023] Activation of the EIF2α/ATF4 and ATF6 Pathways in DU-145 Cells by Boric Acid at the Concentration Reported in Men at the US Mean Boron Intake. (2017). https://pubmed.ncbi.nlm.nih.gov/27587023/ DOI: 10.1007/s12011-016-0824-y
Complete structured claim and evidence
Where it participates (unsigned role)
Boric-acid treatment induced stress granules and mild activation of the eIF2α/ATF4 response in DU-145 cells.
Experimental context and source evidence
- evidence_span
- {"source_cache": "artifacts/boron-research/25425213.abstract.txt", "locator": "Exact primary indexed abstract; zero-based, end-exclusive Unicode character offsets", "file_sha256": "5bd1560c24d673e3b1d1fc3d44f0c910ac981ffd2f53a3b90c6259f136c69fca", "start_char": 0, "end_char": 1068, "text_sha256": "5bd1560c24d673e3b1d1fc3d44f0c910ac981ffd2f53a3b90c6259f136c69fca"}
- experimental_model
- Human prostate cancer cell stress-response assays
- exposure
- Boric-acid exposure in the physiological-range conditions reported by the study
- limitations
- This study measured stress responses in a tumor cell line. Proposed consequences for bone differentiation or cancer risk were not tested clinical outcomes.
- nutrient_topic
- Boron research collection; topical membership is not evidence of a direct dietary effect. · Boron
- organism
- Human DU-145 cells
- plain_language
- These cells reorganized parts of their protein-making machinery as a mild stress response.
- primary_references
- [boron-p25425213] Boric acid induces cytoplasmic stress granule formation, eIF2α phosphorylation, and ATF4 in prostate DU-145 cells. (2015). https://pubmed.ncbi.nlm.nih.gov/25425213/ DOI: 10.1007/s10534-014-9809-5
- tissue_or_cell_type
- Prostate cancer cell culture
Boron: chemistry, nutrient interactions, low-intake studies and mechanistic uncertainties (2026-09-17) · lines 365–376
AI-assisted literature curation; primary study URLs and scope retained in the document and extraction. Not publisher full text. · supports · Human prostate cancer cell stress-response assays · source_derived_draft · unverified_draft
### boron-stress-granules Boric-acid treatment induced stress granules and mild activation of the eIF2α/ATF4 response in DU-145 cells. Condition category: normal nutrient_topic: Boron research collection; topical membership is not evidence of a direct dietary effect. plain_language: These cells reorganized parts of their protein-making machinery as a mild stress response. organism: Human DU-145 cells tissue_or_cell_type: Prostate cancer cell culture experimental_model: Human prostate cancer cell stress-response assays limitations: This study measured stress responses in a tumor cell line. Proposed consequences for bone differentiation or cancer risk were not tested clinical outcomes. exposure: Boric-acid exposure in the physiological-range conditions reported by the study evidence_span: {"source_cache": "artifacts/boron-research/25425213.abstract.txt", "locator": "Exact primary indexed abstract; zero-based, end-exclusive Unicode character offsets", "file_sha256": "5bd1560c24d673e3b1d1fc3d44f0c910ac981ffd2f53a3b90c6259f136c69fca", "start_char": 0, "end_char": 1068, "text_sha256": "5bd1560c24d673e3b1d1fc3d44f0c910ac981ffd2f53a3b90c6259f136c69fca"} [boron-p25425213] Boric acid induces cytoplasmic stress granule formation, eIF2α phosphorylation, and ATF4 in prostate DU-145 cells. (2015). https://pubmed.ncbi.nlm.nih.gov/25425213/ DOI: 10.1007/s10534-014-9809-5
Complete structured claim and evidence
The events it takes part in
A mechanism often involves more than two components. These are the full events, with every participant and its role.
Situations it appears in
Low-supply and faulty-machinery situations recorded in the chapters where this component plays a part.
In the sources
Preserved passages that mention this component, quoted exactly. Open one to read it in context.
Open hypotheses
Proposed ideas that involve this component. They are labeled as hypotheses and do not change any recorded statement.
This is a research prototype built from draft material. It is not medical advice, and its statements still await verification against the original studies.