Component
Serine 530 of cyclooxygenase-1
Serine 530 of cyclooxygenase-1. Species, exposure and limitations are retained in each linked claim.
8 recorded relationships. Experimental role, claim status and evidence remain attached to each record.
How nutrients influence it
Every nutrient with a recorded effect on this component, credited to the nutrient that acted rather than the chapter that recorded it. Open a nutrient to see the findings and the conditions they were measured under.
Other things that act on it
Enzymes, hormones, genes, and other components with a recorded effect. These are not nutrients, so they do not count toward the arrows above. Each finding names the chapter that recorded it.
How nutrients reach it in more than one step
Chains of two or more recorded steps that end here, grouped by the nutrient they start from. Each step is a separate finding, so a chain is a route a mechanism could take, not proof that it does.
Tracing routes…
What it does
Every recorded relationship this component is part of, grouped by its role. Plain wording comes first; the technical statement follows.
What it acts on
Using site-directed mutagenesis to prepare five further substitutions of Ser-530, the presence of amino acids with bulky side chains at position 530 inhibited cyclooxygenase activity and decreased the apparent affinity of the enzyme for arachidonate, consistent with the proposal that aspirin inhibits by placing a larger than normal side chain at position 530; residues 529 to 533 all proved important for the peroxidase as well as the cyclooxygenase activity, and Phe-529 in particular was critical for structure and catalysis.
Experimental context and source evidence
- evidence_span
- {"source_cache": "artifacts/aspirin-research/1601897.abstract.txt", "locator": "Indexed abstract; zero-based, end-exclusive Unicode character offsets", "file_sha256": "616cbc367eb38194b858872cbf91108baa3b1dec7aa039a40f69a29fa7157c2d", "start_char": 0, "end_char": 1744, "text_sha256": "616cbc367eb38194b858872cbf91108baa3b1dec7aa039a40f69a29fa7157c2d"}
- experimental_model
- Five further substitutions at Ser-530 and substitutions at adjoining residues, expressed transiently in cos-1 cells
- exposure
- A graded series of side chains at position 530, plus substitutions at Phe-529, Leu-531, Lys-532 and Gly-533
- limitations
- Tests the steric hypothesis by varying the bulk systematically rather than with one mutant. Transient expression in a heterologous cell line.
- nutrient_topic
- Aspirin research collection; topical membership is not evidence of a direct clinical effect, and aspirin is recorded separately from salicylate, the metabolite it becomes. · Aspirin / acetylsalicylic acid
- organism
- Enzyme
- plain_language
- The bigger the group put at that position, the worse the enzyme binds its substrate.
- primary_references
- [asa-p1601897] Prostaglandin endoperoxide synthase. The aspirin acetylation region. (1992). https://pubmed.ncbi.nlm.nih.gov/1601897/ DOI: 10.1016/s0021-9258(19)49852-9
- tissue_or_cell_type
- Recombinant prostaglandin endoperoxide H synthase-1
AI-assisted literature curation; primary study URLs and scope retained in the document and extraction. Not publisher full text. · supports · Five further substitutions at Ser-530 and substitutions at adjoining residues, expressed transiently in cos-1 cells · source_derived_draft · unverified_draft
### asa-graded-bulk-series Using site-directed mutagenesis to prepare five further substitutions of Ser-530, the presence of amino acids with bulky side chains at position 530 inhibited cyclooxygenase activity and decreased the apparent affinity of the enzyme for arachidonate, consistent with the proposal that aspirin inhibits by placing a larger than normal side chain at position 530; residues 529 to 533 all proved important for the peroxidase as well as the cyclooxygenase activity, and Phe-529 in particular was critical for structure and catalysis. Condition category: normal nutrient_topic: Aspirin research collection; topical membership is not evidence of a direct clinical effect, and aspirin is recorded separately from salicylate, the metabolite it becomes. plain_language: The bigger the group put at that position, the worse the enzyme binds its substrate. organism: Enzyme tissue_or_cell_type: Recombinant prostaglandin endoperoxide H synthase-1 experimental_model: Five further substitutions at Ser-530 and substitutions at adjoining residues, expressed transiently in cos-1 cells limitations: Tests the steric hypothesis by varying the bulk systematically rather than with one mutant. Transient expression in a heterologous cell line. exposure: A graded series of side chains at position 530, plus substitutions at Phe-529, Leu-531, Lys-532 and Gly-533 evidence_span: {"source_cache": "artifacts/aspirin-research/1601897.abstract.txt", "locator": "Indexed abstract; zero-based, end-exclusive Unicode character offsets", "file_sha256": "616cbc367eb38194b858872cbf91108baa3b1dec7aa039a40f69a29fa7157c2d", "start_char": 0, "end_char": 1744, "text_sha256": "616cbc367eb38194b858872cbf91108baa3b1dec7aa039a40f69a29fa7157c2d"} [asa-p1601897] Prostaglandin endoperoxide synthase. The aspirin acetylation region. (1992). https://pubmed.ncbi.nlm.nih.gov/1601897/ DOI: 10.1016/s0021-9258(19)49852-9
Complete structured claim and evidenceDiclofenac inhibition was unaffected by mutation of Arg-120 to alanine but was dramatically attenuated by the S530A mutation, and the crystal structure of diclofenac with murine COX-2 shows it bound in an inverted conformation with its carboxylate hydrogen-bonded to Tyr-385 and Ser-530, the first experimental demonstration that an acidic non-steroidal anti-inflammatory drug can bind in an orientation that precludes a salt bridge with Arg-120; Ser-530 is also important in time-dependent inhibition by nimesulide and piroxicam.
Experimental context and source evidence
- evidence_span
- {"source_cache": "artifacts/aspirin-research/12925531.abstract.txt", "locator": "Indexed abstract; zero-based, end-exclusive Unicode character offsets", "file_sha256": "732e941e7f912ae2495715634eabdef176dae39e32359609f15b05a230d5f6e0", "start_char": 0, "end_char": 1473, "text_sha256": "732e941e7f912ae2495715634eabdef176dae39e32359609f15b05a230d5f6e0"}
- experimental_model
- Site-directed mutants of COX-2 at Arg-120, Tyr-355, Tyr-348 and Ser-530 tested against a series of inhibitors, with a diclofenac co-crystal structure
- exposure
- Diclofenac, nimesulide and piroxicam against the mutant panel
- limitations
- Shows the acetylation serine is also a general binding determinant for other drugs. The structural work is on murine rather than human enzyme.
- nutrient_topic
- Aspirin research collection; topical membership is not evidence of a direct clinical effect, and aspirin is recorded separately from salicylate, the metabolite it becomes. · Aspirin / acetylsalicylic acid
- organism
- Mouse enzyme
- plain_language
- The same serine aspirin attacks is where several other anti-inflammatories anchor themselves.
- primary_references
- [asa-p12925531] A novel mechanism of cyclooxygenase-2 inhibition involving interactions with Ser-530 and Tyr-385. (2003). https://pubmed.ncbi.nlm.nih.gov/12925531/ DOI: 10.1074/jbc.m305481200
- tissue_or_cell_type
- Cyclooxygenase-2
AI-assisted literature curation; primary study URLs and scope retained in the document and extraction. Not publisher full text. · supports · Site-directed mutants of COX-2 at Arg-120, Tyr-355, Tyr-348 and Ser-530 tested against a series of inhibitors, with a diclofenac co-crystal structure · source_derived_draft · unverified_draft
### asa-ser530-binds-other-drugs Diclofenac inhibition was unaffected by mutation of Arg-120 to alanine but was dramatically attenuated by the S530A mutation, and the crystal structure of diclofenac with murine COX-2 shows it bound in an inverted conformation with its carboxylate hydrogen-bonded to Tyr-385 and Ser-530, the first experimental demonstration that an acidic non-steroidal anti-inflammatory drug can bind in an orientation that precludes a salt bridge with Arg-120; Ser-530 is also important in time-dependent inhibition by nimesulide and piroxicam. Condition category: normal nutrient_topic: Aspirin research collection; topical membership is not evidence of a direct clinical effect, and aspirin is recorded separately from salicylate, the metabolite it becomes. plain_language: The same serine aspirin attacks is where several other anti-inflammatories anchor themselves. organism: Mouse enzyme tissue_or_cell_type: Cyclooxygenase-2 experimental_model: Site-directed mutants of COX-2 at Arg-120, Tyr-355, Tyr-348 and Ser-530 tested against a series of inhibitors, with a diclofenac co-crystal structure limitations: Shows the acetylation serine is also a general binding determinant for other drugs. The structural work is on murine rather than human enzyme. exposure: Diclofenac, nimesulide and piroxicam against the mutant panel evidence_span: {"source_cache": "artifacts/aspirin-research/12925531.abstract.txt", "locator": "Indexed abstract; zero-based, end-exclusive Unicode character offsets", "file_sha256": "732e941e7f912ae2495715634eabdef176dae39e32359609f15b05a230d5f6e0", "start_char": 0, "end_char": 1473, "text_sha256": "732e941e7f912ae2495715634eabdef176dae39e32359609f15b05a230d5f6e0"} [asa-p12925531] A novel mechanism of cyclooxygenase-2 inhibition involving interactions with Ser-530 and Tyr-385. (2003). https://pubmed.ncbi.nlm.nih.gov/12925531/ DOI: 10.1074/jbc.m305481200
Complete structured claim and evidence
What acts on it
Acetylation of Ser-530 of sheep prostaglandin endoperoxide synthase by aspirin causes irreversible inactivation of the cyclooxygenase activity of the enzyme, and since the serine hydroxyl is not required for catalysis the acetylation apparently introduces a bulky side chain at position 530 which interferes with arachidonate binding; a sequence of 35 residues with Ser-530 at the midpoint was identical in the sheep and mouse enzymes.
Experimental context and source evidence
- evidence_span
- {"source_cache": "artifacts/aspirin-research/2108169.abstract.txt", "locator": "Indexed abstract; zero-based, end-exclusive Unicode character offsets", "file_sha256": "c7b11508521a3854b432f3836de6e92ba9863c8edb244d747bb1c37634c0bb50", "start_char": 0, "end_char": 2076, "text_sha256": "c7b11508521a3854b432f3836de6e92ba9863c8edb244d747bb1c37634c0bb50"}
- experimental_model
- Site-directed mutagenesis of sheep prostaglandin endoperoxide synthase expressed in Cos-1 cells
- exposure
- Serine 530 replaced with alanine, compared with the native enzyme against aspirin and reversible inhibitors
- limitations
- The decisive experiment for the mechanism: it separates what the serine does for catalysis from what acetylating it does. Recombinant sheep enzyme, not human enzyme in a tissue.
- nutrient_topic
- Aspirin research collection; topical membership is not evidence of a direct clinical effect, and aspirin is recorded separately from salicylate, the metabolite it becomes. · Aspirin / acetylsalicylic acid
- organism
- Sheep and mouse enzyme
- plain_language
- The acetyl group works by being in the way, not by removing something the enzyme needed.
- primary_references
- [asa-p2108169] The aspirin and heme-binding sites of ovine and murine prostaglandin endoperoxide synthases. (1990). https://pubmed.ncbi.nlm.nih.gov/2108169/ DOI: 10.1016/s0021-9258(19)34105-5
- tissue_or_cell_type
- Recombinant enzyme in Cos-1 cells
AI-assisted literature curation; primary study URLs and scope retained in the document and extraction. Not publisher full text. · supports · Site-directed mutagenesis of sheep prostaglandin endoperoxide synthase expressed in Cos-1 cells · source_derived_draft · unverified_draft
### asa-acetylation-is-steric Acetylation of Ser-530 of sheep prostaglandin endoperoxide synthase by aspirin causes irreversible inactivation of the cyclooxygenase activity of the enzyme, and since the serine hydroxyl is not required for catalysis the acetylation apparently introduces a bulky side chain at position 530 which interferes with arachidonate binding; a sequence of 35 residues with Ser-530 at the midpoint was identical in the sheep and mouse enzymes. Condition category: normal nutrient_topic: Aspirin research collection; topical membership is not evidence of a direct clinical effect, and aspirin is recorded separately from salicylate, the metabolite it becomes. plain_language: The acetyl group works by being in the way, not by removing something the enzyme needed. organism: Sheep and mouse enzyme tissue_or_cell_type: Recombinant enzyme in Cos-1 cells experimental_model: Site-directed mutagenesis of sheep prostaglandin endoperoxide synthase expressed in Cos-1 cells limitations: The decisive experiment for the mechanism: it separates what the serine does for catalysis from what acetylating it does. Recombinant sheep enzyme, not human enzyme in a tissue. exposure: Serine 530 replaced with alanine, compared with the native enzyme against aspirin and reversible inhibitors evidence_span: {"source_cache": "artifacts/aspirin-research/2108169.abstract.txt", "locator": "Indexed abstract; zero-based, end-exclusive Unicode character offsets", "file_sha256": "c7b11508521a3854b432f3836de6e92ba9863c8edb244d747bb1c37634c0bb50", "start_char": 0, "end_char": 2076, "text_sha256": "c7b11508521a3854b432f3836de6e92ba9863c8edb244d747bb1c37634c0bb50"} [asa-p2108169] The aspirin and heme-binding sites of ovine and murine prostaglandin endoperoxide synthases. (1990). https://pubmed.ncbi.nlm.nih.gov/2108169/ DOI: 10.1016/s0021-9258(19)34105-5
Complete structured claim and evidence
Where it participates (unsigned role)
Valeryl (pentanoyl) salicylate was the only compound of eight acyl salicylates to show isozyme selectivity and inhibited human cyclooxygenase-1 much more effectively than cyclooxygenase-2 in a time-dependent manner, inhibited ovine cyclooxygenase-1 but did not inhibit the S530A mutant of ovine cyclooxygenase-1 which is also refractory to acetylsalicylate, so valeryl salicylate acylates the active site serine.
Experimental context and source evidence
- evidence_span
- {"source_cache": "artifacts/aspirin-research/7872783.abstract.txt", "locator": "Indexed abstract; zero-based, end-exclusive Unicode character offsets", "file_sha256": "f7e8a07a2704cb600938505ec51355671355769c01868ed0966731382901425b", "start_char": 0, "end_char": 1756, "text_sha256": "f7e8a07a2704cb600938505ec51355671355769c01868ed0966731382901425b"}
- experimental_model
- Eight acyl salicylates tested against human cyclooxygenase-1 and -2 expressed transiently in cos-1 cells, with the S530A mutant as a control
- exposure
- Valeryl salicylate and related esters compared with acetylsalicylate
- limitations
- Uses the acetylation chemistry as a design principle and confirms the serine requirement with a mutant. Recombinant enzyme and a murine fibroblast line, not human tissue.
- nutrient_topic
- Aspirin research collection; topical membership is not evidence of a direct clinical effect, and aspirin is recorded separately from salicylate, the metabolite it becomes. · Aspirin / acetylsalicylic acid
- organism
- Human and sheep enzyme
- plain_language
- Swap aspirin’s acetyl group for a bigger one and you get a drug that hits only the first enzyme.
- primary_references
- [asa-p7872783] Selective inhibition of prostaglandin endoperoxide synthase-1 (cyclooxygenase-1) by valerylsalicylic acid. (1995). https://pubmed.ncbi.nlm.nih.gov/7872783/ DOI: 10.1006/abbi.1995.1130
- tissue_or_cell_type
- Recombinant cyclooxygenase
AI-assisted literature curation; primary study URLs and scope retained in the document and extraction. Not publisher full text. · supports · Eight acyl salicylates tested against human cyclooxygenase-1 and -2 expressed transiently in cos-1 cells, with the S530A mutant as a control · source_derived_draft · unverified_draft
### asa-bigger-acyl-group-selective Valeryl (pentanoyl) salicylate was the only compound of eight acyl salicylates to show isozyme selectivity and inhibited human cyclooxygenase-1 much more effectively than cyclooxygenase-2 in a time-dependent manner, inhibited ovine cyclooxygenase-1 but did not inhibit the S530A mutant of ovine cyclooxygenase-1 which is also refractory to acetylsalicylate, so valeryl salicylate acylates the active site serine. Condition category: normal nutrient_topic: Aspirin research collection; topical membership is not evidence of a direct clinical effect, and aspirin is recorded separately from salicylate, the metabolite it becomes. plain_language: Swap aspirin’s acetyl group for a bigger one and you get a drug that hits only the first enzyme. organism: Human and sheep enzyme tissue_or_cell_type: Recombinant cyclooxygenase experimental_model: Eight acyl salicylates tested against human cyclooxygenase-1 and -2 expressed transiently in cos-1 cells, with the S530A mutant as a control limitations: Uses the acetylation chemistry as a design principle and confirms the serine requirement with a mutant. Recombinant enzyme and a murine fibroblast line, not human tissue. exposure: Valeryl salicylate and related esters compared with acetylsalicylate evidence_span: {"source_cache": "artifacts/aspirin-research/7872783.abstract.txt", "locator": "Indexed abstract; zero-based, end-exclusive Unicode character offsets", "file_sha256": "f7e8a07a2704cb600938505ec51355671355769c01868ed0966731382901425b", "start_char": 0, "end_char": 1756, "text_sha256": "f7e8a07a2704cb600938505ec51355671355769c01868ed0966731382901425b"} [asa-p7872783] Selective inhibition of prostaglandin endoperoxide synthase-1 (cyclooxygenase-1) by valerylsalicylic acid. (1995). https://pubmed.ncbi.nlm.nih.gov/7872783/ DOI: 10.1006/abbi.1995.1130
Complete structured claim and evidenceAspirin maximally acetylates one monomer of human cyclooxygenase-2, the acetylated monomer forming 15-hydroperoxyeicosatetraenoic acid from arachidonic acid while the nonacetylated partner monomer forms mainly prostaglandin H2 but at only 15 to 20% of the rate of native enzyme, conclusions based on diclofenac binding a single monomer of native enzyme having an unmodified Ser530 and on diclofenac inhibiting prostaglandin H2 but not 15-hydroperoxyeicosatetraenoic acid formation by the acetylated enzyme.
Experimental context and source evidence
- evidence_span
- {"source_cache": "artifacts/aspirin-research/20194532.abstract.txt", "locator": "Indexed abstract; zero-based, end-exclusive Unicode character offsets", "file_sha256": "09427e18078449741ea9ea42dc91a16f50ca9f604ec05c4decbb255731104eaf", "start_char": 0, "end_char": 1441, "text_sha256": "09427e18078449741ea9ea42dc91a16f50ca9f604ec05c4decbb255731104eaf"}
- experimental_model
- Quantitative characterisation of aspirin-acetylated human cyclooxygenase-2 monomers using diclofenac to distinguish them
- exposure
- Aspirin acetylation with arachidonic, eicosapentaenoic and docosahexaenoic acid as substrates
- limitations
- Measures rates rather than presence, and reaches a much less generous estimate of resolvin formation than the reports it tests. It is an in vitro enzyme study, so it does not exclude accumulation or amplification in a living tissue.
- nutrient_topic
- Aspirin research collection; topical membership is not evidence of a direct clinical effect, and aspirin is recorded separately from salicylate, the metabolite it becomes. · Aspirin / acetylsalicylic acid
- organism
- Human enzyme
- plain_language
- Aspirin only ever modifies half of the paired enzyme, and the untouched half carries on at a fifth speed.
- primary_references
- [asa-p20194532] Asymmetric acetylation of the cyclooxygenase-2 homodimer by aspirin and its effects on the oxygenation of arachidonic, eicosapentaenoic, and docosahexaenoic acids. (2010). https://pubmed.ncbi.nlm.nih.gov/20194532/ DOI: 10.1124/mol.109.063115
- tissue_or_cell_type
- Cyclooxygenase-2 homodimer
AI-assisted literature curation; primary study URLs and scope retained in the document and extraction. Not publisher full text. · supports · Quantitative characterisation of aspirin-acetylated human cyclooxygenase-2 monomers using diclofenac to distinguish them · source_derived_draft · unverified_draft
### asa-only-one-monomer-is-acetylated Aspirin maximally acetylates one monomer of human cyclooxygenase-2, the acetylated monomer forming 15-hydroperoxyeicosatetraenoic acid from arachidonic acid while the nonacetylated partner monomer forms mainly prostaglandin H2 but at only 15 to 20% of the rate of native enzyme, conclusions based on diclofenac binding a single monomer of native enzyme having an unmodified Ser530 and on diclofenac inhibiting prostaglandin H2 but not 15-hydroperoxyeicosatetraenoic acid formation by the acetylated enzyme. Condition category: normal nutrient_topic: Aspirin research collection; topical membership is not evidence of a direct clinical effect, and aspirin is recorded separately from salicylate, the metabolite it becomes. plain_language: Aspirin only ever modifies half of the paired enzyme, and the untouched half carries on at a fifth speed. organism: Human enzyme tissue_or_cell_type: Cyclooxygenase-2 homodimer experimental_model: Quantitative characterisation of aspirin-acetylated human cyclooxygenase-2 monomers using diclofenac to distinguish them limitations: Measures rates rather than presence, and reaches a much less generous estimate of resolvin formation than the reports it tests. It is an in vitro enzyme study, so it does not exclude accumulation or amplification in a living tissue. exposure: Aspirin acetylation with arachidonic, eicosapentaenoic and docosahexaenoic acid as substrates evidence_span: {"source_cache": "artifacts/aspirin-research/20194532.abstract.txt", "locator": "Indexed abstract; zero-based, end-exclusive Unicode character offsets", "file_sha256": "09427e18078449741ea9ea42dc91a16f50ca9f604ec05c4decbb255731104eaf", "start_char": 0, "end_char": 1441, "text_sha256": "09427e18078449741ea9ea42dc91a16f50ca9f604ec05c4decbb255731104eaf"} [asa-p20194532] Asymmetric acetylation of the cyclooxygenase-2 homodimer by aspirin and its effects on the oxygenation of arachidonic, eicosapentaenoic, and docosahexaenoic acids. (2010). https://pubmed.ncbi.nlm.nih.gov/20194532/ DOI: 10.1124/mol.109.063115
Complete structured claim and evidenceWhen microsomal human cyclooxygenase-2 was incubated with acetyl-carbon-14 labelled aspirin the enzyme was acetylated, while an S516A mutant which retains enzyme activity was not acetylated, indicating that Ser-516 is the site of aspirin acetylation and is homologous to the active site serine of cyclooxygenase-1; an S516N mutant was catalytically active whereas an S516Q mutant lacked cyclooxygenase but retained peroxidase activity, and because in cyclooxygenase-1 the smaller asparagine substitution suffices to eliminate cyclooxygenase activity the active site of cyclooxygenase-2 is slightly larger.
Experimental context and source evidence
- evidence_span
- {"source_cache": "artifacts/aspirin-research/8175750.abstract.txt", "locator": "Indexed abstract; zero-based, end-exclusive Unicode character offsets", "file_sha256": "9ba85af90c62b157cf53032375ca703e8b78eff6ddd22ad627bbd7e65965d8e9", "start_char": 0, "end_char": 1786, "text_sha256": "9ba85af90c62b157cf53032375ca703e8b78eff6ddd22ad627bbd7e65965d8e9"}
- experimental_model
- Human cyclooxygenase-1 and -2 expressed in cos-1 cells treated with aspirin and with carbon-14 labelled aspirin, with a mutant series at Ser-516
- exposure
- Aspirin acetylation, with S516A, S516N, S516Q and S516M substitutions
- limitations
- Identifies the site by direct labelling and explains the isoform difference by active site volume. Recombinant enzyme in a heterologous cell line.
- nutrient_topic
- Aspirin research collection; topical membership is not evidence of a direct clinical effect, and aspirin is recorded separately from salicylate, the metabolite it becomes. · Aspirin / acetylsalicylic acid
- organism
- Human enzyme
- plain_language
- The labelled acetyl group lands on one serine, and the second enzyme’s pocket is roomier, which is why the two behave differently.
- primary_references
- [asa-p8175750] Acetylation of human prostaglandin endoperoxide synthase-2 (cyclooxygenase-2) by aspirin. (1994). https://pubmed.ncbi.nlm.nih.gov/8175750/ DOI: 10.1016/s0021-9258(17)36820-5
- tissue_or_cell_type
- Recombinant cyclooxygenase
AI-assisted literature curation; primary study URLs and scope retained in the document and extraction. Not publisher full text. · supports · Human cyclooxygenase-1 and -2 expressed in cos-1 cells treated with aspirin and with carbon-14 labelled aspirin, with a mutant series at Ser-516 · source_derived_draft · unverified_draft
### asa-ser516-is-the-site When microsomal human cyclooxygenase-2 was incubated with acetyl-carbon-14 labelled aspirin the enzyme was acetylated, while an S516A mutant which retains enzyme activity was not acetylated, indicating that Ser-516 is the site of aspirin acetylation and is homologous to the active site serine of cyclooxygenase-1; an S516N mutant was catalytically active whereas an S516Q mutant lacked cyclooxygenase but retained peroxidase activity, and because in cyclooxygenase-1 the smaller asparagine substitution suffices to eliminate cyclooxygenase activity the active site of cyclooxygenase-2 is slightly larger. Condition category: normal nutrient_topic: Aspirin research collection; topical membership is not evidence of a direct clinical effect, and aspirin is recorded separately from salicylate, the metabolite it becomes. plain_language: The labelled acetyl group lands on one serine, and the second enzyme’s pocket is roomier, which is why the two behave differently. organism: Human enzyme tissue_or_cell_type: Recombinant cyclooxygenase experimental_model: Human cyclooxygenase-1 and -2 expressed in cos-1 cells treated with aspirin and with carbon-14 labelled aspirin, with a mutant series at Ser-516 limitations: Identifies the site by direct labelling and explains the isoform difference by active site volume. Recombinant enzyme in a heterologous cell line. exposure: Aspirin acetylation, with S516A, S516N, S516Q and S516M substitutions evidence_span: {"source_cache": "artifacts/aspirin-research/8175750.abstract.txt", "locator": "Indexed abstract; zero-based, end-exclusive Unicode character offsets", "file_sha256": "9ba85af90c62b157cf53032375ca703e8b78eff6ddd22ad627bbd7e65965d8e9", "start_char": 0, "end_char": 1786, "text_sha256": "9ba85af90c62b157cf53032375ca703e8b78eff6ddd22ad627bbd7e65965d8e9"} [asa-p8175750] Acetylation of human prostaglandin endoperoxide synthase-2 (cyclooxygenase-2) by aspirin. (1994). https://pubmed.ncbi.nlm.nih.gov/8175750/ DOI: 10.1016/s0021-9258(17)36820-5
Complete structured claim and evidenceCos-1 cells transfected with native or Ser-530-to-alanine mutant sheep prostaglandin endoperoxide synthase expressed comparable cyclooxygenase and hydroperoxidase activities, with the same Km for arachidonate of 8 micromolar and the same ID50 values for reversible inhibition by flurbiprofen at 5 micromolar, flufenamate at 20 micromolar and aspirin at 20 millimolar; however only the native enzyme was irreversibly inactivated by aspirin, so the active site Ser-530 is not essential for catalysis or substrate binding.
Experimental context and source evidence
- evidence_span
- {"source_cache": "artifacts/aspirin-research/2108169.abstract.txt", "locator": "Indexed abstract; zero-based, end-exclusive Unicode character offsets", "file_sha256": "c7b11508521a3854b432f3836de6e92ba9863c8edb244d747bb1c37634c0bb50", "start_char": 0, "end_char": 2076, "text_sha256": "c7b11508521a3854b432f3836de6e92ba9863c8edb244d747bb1c37634c0bb50"}
- experimental_model
- Site-directed mutagenesis of sheep prostaglandin endoperoxide synthase expressed in Cos-1 cells
- exposure
- Serine 530 replaced with alanine, compared with the native enzyme against aspirin and reversible inhibitors
- limitations
- The decisive experiment for the mechanism: it separates what the serine does for catalysis from what acetylating it does. Recombinant sheep enzyme, not human enzyme in a tissue.
- nutrient_topic
- Aspirin research collection; topical membership is not evidence of a direct clinical effect, and aspirin is recorded separately from salicylate, the metabolite it becomes. · Aspirin / acetylsalicylic acid
- organism
- Sheep and mouse enzyme
- plain_language
- Remove the serine and the enzyme still works; it is there to be acetylated, not to do the chemistry.
- primary_references
- [asa-p2108169] The aspirin and heme-binding sites of ovine and murine prostaglandin endoperoxide synthases. (1990). https://pubmed.ncbi.nlm.nih.gov/2108169/ DOI: 10.1016/s0021-9258(19)34105-5
- tissue_or_cell_type
- Recombinant enzyme in Cos-1 cells
AI-assisted literature curation; primary study URLs and scope retained in the document and extraction. Not publisher full text. · supports · Site-directed mutagenesis of sheep prostaglandin endoperoxide synthase expressed in Cos-1 cells · source_derived_draft · unverified_draft
### asa-serine-is-not-catalytic Cos-1 cells transfected with native or Ser-530-to-alanine mutant sheep prostaglandin endoperoxide synthase expressed comparable cyclooxygenase and hydroperoxidase activities, with the same Km for arachidonate of 8 micromolar and the same ID50 values for reversible inhibition by flurbiprofen at 5 micromolar, flufenamate at 20 micromolar and aspirin at 20 millimolar; however only the native enzyme was irreversibly inactivated by aspirin, so the active site Ser-530 is not essential for catalysis or substrate binding. Condition category: normal nutrient_topic: Aspirin research collection; topical membership is not evidence of a direct clinical effect, and aspirin is recorded separately from salicylate, the metabolite it becomes. plain_language: Remove the serine and the enzyme still works; it is there to be acetylated, not to do the chemistry. organism: Sheep and mouse enzyme tissue_or_cell_type: Recombinant enzyme in Cos-1 cells experimental_model: Site-directed mutagenesis of sheep prostaglandin endoperoxide synthase expressed in Cos-1 cells limitations: The decisive experiment for the mechanism: it separates what the serine does for catalysis from what acetylating it does. Recombinant sheep enzyme, not human enzyme in a tissue. exposure: Serine 530 replaced with alanine, compared with the native enzyme against aspirin and reversible inhibitors evidence_span: {"source_cache": "artifacts/aspirin-research/2108169.abstract.txt", "locator": "Indexed abstract; zero-based, end-exclusive Unicode character offsets", "file_sha256": "c7b11508521a3854b432f3836de6e92ba9863c8edb244d747bb1c37634c0bb50", "start_char": 0, "end_char": 2076, "text_sha256": "c7b11508521a3854b432f3836de6e92ba9863c8edb244d747bb1c37634c0bb50"} [asa-p2108169] The aspirin and heme-binding sites of ovine and murine prostaglandin endoperoxide synthases. (1990). https://pubmed.ncbi.nlm.nih.gov/2108169/ DOI: 10.1016/s0021-9258(19)34105-5
Complete structured claim and evidenceThe 3.4 angstrom X-ray crystal structure of prostaglandin H2 synthase isoform-1 inactivated by the potent aspirin analogue 2-bromoacetoxy-benzoic acid shows that acetylation abolishes cyclooxygenase activity by steric blockage of the active-site channel and not through a large conformational change, with two rotameric states of the acetyl-serine side chain blocking the channel to different extents, a result which may explain the dissimilar effects of aspirin on the two isoforms.
Experimental context and source evidence
- evidence_span
- {"source_cache": "artifacts/aspirin-research/7552725.abstract.txt", "locator": "Indexed abstract; zero-based, end-exclusive Unicode character offsets", "file_sha256": "dd61431f20eb312313942bc8a89f970d5d2e33600b32abe692f20d9d5c57d7b1", "start_char": 0, "end_char": 751, "text_sha256": "dd61431f20eb312313942bc8a89f970d5d2e33600b32abe692f20d9d5c57d7b1"}
- experimental_model
- X-ray crystal structure at 3.4 angstrom of prostaglandin H2 synthase-1 inactivated by a potent aspirin analogue
- exposure
- 2-bromoacetoxy-benzoic acid acetylation, with salicylic acid soaked into the structure
- limitations
- Direct structural evidence rather than inference from mutants, though at modest resolution and using an analogue rather than aspirin itself.
- nutrient_topic
- Aspirin research collection; topical membership is not evidence of a direct clinical effect, and aspirin is recorded separately from salicylate, the metabolite it becomes. · Aspirin / acetylsalicylic acid
- organism
- Enzyme
- plain_language
- The picture confirms it: the acetyl group simply plugs the tunnel the fatty acid has to travel down.
- primary_references
- [asa-p7552725] The structural basis of aspirin activity inferred from the crystal structure of inactivated prostaglandin H2 synthase. (1995). https://pubmed.ncbi.nlm.nih.gov/7552725/ DOI: 10.1038/nsb0895-637
- tissue_or_cell_type
- Crystallised prostaglandin H2 synthase-1
AI-assisted literature curation; primary study URLs and scope retained in the document and extraction. Not publisher full text. · supports · X-ray crystal structure at 3.4 angstrom of prostaglandin H2 synthase-1 inactivated by a potent aspirin analogue · source_derived_draft · unverified_draft
### asa-structure-shows-blockage The 3.4 angstrom X-ray crystal structure of prostaglandin H2 synthase isoform-1 inactivated by the potent aspirin analogue 2-bromoacetoxy-benzoic acid shows that acetylation abolishes cyclooxygenase activity by steric blockage of the active-site channel and not through a large conformational change, with two rotameric states of the acetyl-serine side chain blocking the channel to different extents, a result which may explain the dissimilar effects of aspirin on the two isoforms. Condition category: normal nutrient_topic: Aspirin research collection; topical membership is not evidence of a direct clinical effect, and aspirin is recorded separately from salicylate, the metabolite it becomes. plain_language: The picture confirms it: the acetyl group simply plugs the tunnel the fatty acid has to travel down. organism: Enzyme tissue_or_cell_type: Crystallised prostaglandin H2 synthase-1 experimental_model: X-ray crystal structure at 3.4 angstrom of prostaglandin H2 synthase-1 inactivated by a potent aspirin analogue limitations: Direct structural evidence rather than inference from mutants, though at modest resolution and using an analogue rather than aspirin itself. exposure: 2-bromoacetoxy-benzoic acid acetylation, with salicylic acid soaked into the structure evidence_span: {"source_cache": "artifacts/aspirin-research/7552725.abstract.txt", "locator": "Indexed abstract; zero-based, end-exclusive Unicode character offsets", "file_sha256": "dd61431f20eb312313942bc8a89f970d5d2e33600b32abe692f20d9d5c57d7b1", "start_char": 0, "end_char": 751, "text_sha256": "dd61431f20eb312313942bc8a89f970d5d2e33600b32abe692f20d9d5c57d7b1"} [asa-p7552725] The structural basis of aspirin activity inferred from the crystal structure of inactivated prostaglandin H2 synthase. (1995). https://pubmed.ncbi.nlm.nih.gov/7552725/ DOI: 10.1038/nsb0895-637
Complete structured claim and evidence
The events it takes part in
A mechanism often involves more than two components. These are the full events, with every participant and its role.
Situations it appears in
Low-supply and faulty-machinery situations recorded in the chapters where this component plays a part.
In the sources
Preserved passages that mention this component, quoted exactly. Open one to read it in context.
Open hypotheses
Proposed ideas that involve this component. They are labeled as hypotheses and do not change any recorded statement.
This is a research prototype built from draft material. It is not medical advice, and its statements still await verification against the original studies.