Component
Carbendazim
Carbendazim. Species, exposure and limitations are retained in each linked claim.
3 recorded relationships. Experimental role, claim status and evidence remain attached to each record.
How nutrients influence it
Every nutrient with a recorded effect on this component, credited to the nutrient that acted rather than the chapter that recorded it. Open a nutrient to see the findings and the conditions they were measured under.
Other things that act on it
Enzymes, hormones, genes, and other components with a recorded effect. These are not nutrients, so they do not count toward the arrows above. Each finding names the chapter that recorded it.
How nutrients reach it in more than one step
Chains of two or more recorded steps that end here, grouped by the nutrient they start from. Each step is a separate finding, so a chain is a route a mechanism could take, not proof that it does.
Tracing routes…
What it does
Every recorded relationship this component is part of, grouped by its role. Plain wording comes first; the technical statement follows.
Where it participates (unsigned role)
Median inhibitory concentrations for nocodazole, oxibendazole, parbendazole, mebendazole and fenbendazole against bovine brain tubulin polymerisation ranged from 1.97 x 10-6 to 6.32 x 10-6 molar, while benomyl, cambendazole and carbendazim had values from 5.83 x 10-5 to 9.01 x 10-5 molar and thiabendazole had a value of 5.49 x 10-4 molar.
Experimental context and source evidence
- evidence_span
- {"source_cache": "artifacts/mebendazole-research/728472.abstract.txt", "locator": "Indexed abstract; zero-based, end-exclusive Unicode character offsets", "file_sha256": "544c36409218c93ebff76d932a2bc6e14ccf7fd6e217d4614c4b561281c2555a", "start_char": 0, "end_char": 1025, "text_sha256": "544c36409218c93ebff76d932a2bc6e14ccf7fd6e217d4614c4b561281c2555a"}
- experimental_model
- Turbidimetric microtubule polymerisation assay and colchicine binding assay on purified bovine brain tubulin
- exposure
- Eleven benzimidazoles compared for inhibition of the initial rate of microtubule polymerisation
- limitations
- Purified mammalian tubulin, which is the off-target rather than the parasite target. It fixes where mebendazole sits in the class by potency.
- nutrient_topic
- Mebendazole research collection; topical membership is not evidence of a direct clinical effect, and mebendazole is recorded separately from albendazole, from the benzimidazole class and from its own crystal forms. · Mebendazole
- organism
- Cattle
- plain_language
- Mebendazole sits in the potent group; thiabendazole is about a hundred times weaker.
- primary_references
- [mbz-p728472] Interaction of anthelmintic benzimidazoles and benzimidazole derivatives with bovine brain tubulin. (1978). https://pubmed.ncbi.nlm.nih.gov/728472/ DOI: 10.1016/0304-4165(78)90334-3
- tissue_or_cell_type
- Brain tubulin
AI-assisted literature curation; primary study URLs and scope retained in the document and extraction. Not publisher full text. · supports · Turbidimetric microtubule polymerisation assay and colchicine binding assay on purified bovine brain tubulin · source_derived_draft · unverified_draft
### mbz-inhibits-polymerisation Median inhibitory concentrations for nocodazole, oxibendazole, parbendazole, mebendazole and fenbendazole against bovine brain tubulin polymerisation ranged from 1.97 x 10-6 to 6.32 x 10-6 molar, while benomyl, cambendazole and carbendazim had values from 5.83 x 10-5 to 9.01 x 10-5 molar and thiabendazole had a value of 5.49 x 10-4 molar. Condition category: normal nutrient_topic: Mebendazole research collection; topical membership is not evidence of a direct clinical effect, and mebendazole is recorded separately from albendazole, from the benzimidazole class and from its own crystal forms. plain_language: Mebendazole sits in the potent group; thiabendazole is about a hundred times weaker. organism: Cattle tissue_or_cell_type: Brain tubulin experimental_model: Turbidimetric microtubule polymerisation assay and colchicine binding assay on purified bovine brain tubulin limitations: Purified mammalian tubulin, which is the off-target rather than the parasite target. It fixes where mebendazole sits in the class by potency. exposure: Eleven benzimidazoles compared for inhibition of the initial rate of microtubule polymerisation evidence_span: {"source_cache": "artifacts/mebendazole-research/728472.abstract.txt", "locator": "Indexed abstract; zero-based, end-exclusive Unicode character offsets", "file_sha256": "544c36409218c93ebff76d932a2bc6e14ccf7fd6e217d4614c4b561281c2555a", "start_char": 0, "end_char": 1025, "text_sha256": "544c36409218c93ebff76d932a2bc6e14ccf7fd6e217d4614c4b561281c2555a"} [mbz-p728472] Interaction of anthelmintic benzimidazoles and benzimidazole derivatives with bovine brain tubulin. (1978). https://pubmed.ncbi.nlm.nih.gov/728472/ DOI: 10.1016/0304-4165(78)90334-3
Complete structured claim and evidenceAcross thirty-two methyl benzimidazol-2-yl carbamates, the size or some colinear physico-chemical characteristic of the substituent in the 5 or 6 position had a profound effect on potency against mammalian tubulin polymerisation, and branching with or without a commensurate increase in polarity adjacent to the benzimidazole ring resulted in a loss of activity.
Experimental context and source evidence
- evidence_span
- {"source_cache": "artifacts/mebendazole-research/3985991.abstract.txt", "locator": "Indexed abstract; zero-based, end-exclusive Unicode character offsets", "file_sha256": "9b881308a6051bd89e2f8323670dd08a8d5e50cf06c7705724ece611440643e5", "start_char": 0, "end_char": 680, "text_sha256": "9b881308a6051bd89e2f8323670dd08a8d5e50cf06c7705724ece611440643e5"}
- experimental_model
- Structure-activity study of thirty-two methyl benzimidazol-2-yl carbamates against mammalian tubulin polymerisation
- exposure
- Systematic variation of the 5(6)-position substituent
- limitations
- Quantitative structure-activity modelling on the off-target protein. It says which part of the molecule matters, not which target matters.
- nutrient_topic
- Mebendazole research collection; topical membership is not evidence of a direct clinical effect, and mebendazole is recorded separately from albendazole, from the benzimidazole class and from its own crystal forms. · Mebendazole
- organism
- Mammal
- plain_language
- One position on the ring decides how well the whole family works.
- primary_references
- [mbz-p3985991] Structure-activity relationships of benzimidazole carbamates as inhibitors of mammalian tubulin, in vitro. (1985). https://pubmed.ncbi.nlm.nih.gov/3985991/ DOI: 10.1016/0006-2952(85)90611-2
- tissue_or_cell_type
- Tubulin
AI-assisted literature curation; primary study URLs and scope retained in the document and extraction. Not publisher full text. · supports · Structure-activity study of thirty-two methyl benzimidazol-2-yl carbamates against mammalian tubulin polymerisation · source_derived_draft · unverified_draft
### mbz-the-5-substituent-governs Across thirty-two methyl benzimidazol-2-yl carbamates, the size or some colinear physico-chemical characteristic of the substituent in the 5 or 6 position had a profound effect on potency against mammalian tubulin polymerisation, and branching with or without a commensurate increase in polarity adjacent to the benzimidazole ring resulted in a loss of activity. Condition category: normal nutrient_topic: Mebendazole research collection; topical membership is not evidence of a direct clinical effect, and mebendazole is recorded separately from albendazole, from the benzimidazole class and from its own crystal forms. plain_language: One position on the ring decides how well the whole family works. organism: Mammal tissue_or_cell_type: Tubulin experimental_model: Structure-activity study of thirty-two methyl benzimidazol-2-yl carbamates against mammalian tubulin polymerisation limitations: Quantitative structure-activity modelling on the off-target protein. It says which part of the molecule matters, not which target matters. exposure: Systematic variation of the 5(6)-position substituent evidence_span: {"source_cache": "artifacts/mebendazole-research/3985991.abstract.txt", "locator": "Indexed abstract; zero-based, end-exclusive Unicode character offsets", "file_sha256": "9b881308a6051bd89e2f8323670dd08a8d5e50cf06c7705724ece611440643e5", "start_char": 0, "end_char": 680, "text_sha256": "9b881308a6051bd89e2f8323670dd08a8d5e50cf06c7705724ece611440643e5"} [mbz-p3985991] Structure-activity relationships of benzimidazole carbamates as inhibitors of mammalian tubulin, in vitro. (1985). https://pubmed.ncbi.nlm.nih.gov/3985991/ DOI: 10.1016/0006-2952(85)90611-2
Complete structured claim and evidenceChanging Saccharomyces cerevisiae beta-tubulin residue phenylalanine 167 to tyrosine produced at least 3 to 4 fold decreased sensitivity to carbendazim and nocodazole and the mutant was cold sensitive, implying a direct effect on benzimidazole binding rather than a nonspecific increase in microtubule stability, but surprisingly the mutant had 8 fold increased sensitivity to benomyl, which is structurally identical to carbendazim except at position 1, suggesting that residue 167 interacts with benzimidazoles in the vicinity of the 1 position.
Experimental context and source evidence
- availability_state
- machinery_impairment Imported condition classification; unverified.
- evidence_span
- {"source_cache": "artifacts/mebendazole-research/8641470.abstract.txt", "locator": "Indexed abstract; zero-based, end-exclusive Unicode character offsets", "file_sha256": "35145959fc480be6039e088de374d7549dddc6f298511a41d2a760e7fdb8f455", "start_char": 0, "end_char": 917, "text_sha256": "35145959fc480be6039e088de374d7549dddc6f298511a41d2a760e7fdb8f455"}
- experimental_model
- Site-directed mutagenesis and gene replacement of Saccharomyces cerevisiae beta-tubulin residue 167
- exposure
- Phenylalanine 167 changed to tyrosine, then tested against carbendazim, nocodazole and benomyl
- limitations
- A clean genetic test in a tractable organism, and the cold sensitivity argues the effect is on binding rather than on general microtubule stability. Yeast beta-tubulin is not nematode beta-tubulin.
- nutrient_topic
- Mebendazole research collection; topical membership is not evidence of a direct clinical effect, and mebendazole is recorded separately from albendazole, from the benzimidazole class and from its own crystal forms. · Mebendazole
- organism
- Yeast
- plain_language
- The same mutation that resists one compound makes the organism more vulnerable to its near twin.
- primary_references
- [mbz-p8641470] Site-directed mutagenesis of Saccharomyces cerevisiae beta-tubulin: interaction between residue 167 and benzimidazole compounds. (1996). https://pubmed.ncbi.nlm.nih.gov/8641470/ DOI: 10.1016/0014-5793(96)00334-1
- tissue_or_cell_type
- Beta-tubulin
- trigger_kind
- machinery_impairment Imported condition classification; unverified.
AI-assisted literature curation; primary study URLs and scope retained in the document and extraction. Not publisher full text. · supports · Site-directed mutagenesis and gene replacement of Saccharomyces cerevisiae beta-tubulin residue 167 · source_derived_draft · unverified_draft
### mbz-tyr167-and-negative-effect Changing Saccharomyces cerevisiae beta-tubulin residue phenylalanine 167 to tyrosine produced at least 3 to 4 fold decreased sensitivity to carbendazim and nocodazole and the mutant was cold sensitive, implying a direct effect on benzimidazole binding rather than a nonspecific increase in microtubule stability, but surprisingly the mutant had 8 fold increased sensitivity to benomyl, which is structurally identical to carbendazim except at position 1, suggesting that residue 167 interacts with benzimidazoles in the vicinity of the 1 position. Condition category: machinery_impairment nutrient_topic: Mebendazole research collection; topical membership is not evidence of a direct clinical effect, and mebendazole is recorded separately from albendazole, from the benzimidazole class and from its own crystal forms. plain_language: The same mutation that resists one compound makes the organism more vulnerable to its near twin. organism: Yeast tissue_or_cell_type: Beta-tubulin experimental_model: Site-directed mutagenesis and gene replacement of Saccharomyces cerevisiae beta-tubulin residue 167 limitations: A clean genetic test in a tractable organism, and the cold sensitivity argues the effect is on binding rather than on general microtubule stability. Yeast beta-tubulin is not nematode beta-tubulin. exposure: Phenylalanine 167 changed to tyrosine, then tested against carbendazim, nocodazole and benomyl evidence_span: {"source_cache": "artifacts/mebendazole-research/8641470.abstract.txt", "locator": "Indexed abstract; zero-based, end-exclusive Unicode character offsets", "file_sha256": "35145959fc480be6039e088de374d7549dddc6f298511a41d2a760e7fdb8f455", "start_char": 0, "end_char": 917, "text_sha256": "35145959fc480be6039e088de374d7549dddc6f298511a41d2a760e7fdb8f455"} [mbz-p8641470] Site-directed mutagenesis of Saccharomyces cerevisiae beta-tubulin: interaction between residue 167 and benzimidazole compounds. (1996). https://pubmed.ncbi.nlm.nih.gov/8641470/ DOI: 10.1016/0014-5793(96)00334-1
Complete structured claim and evidence
The events it takes part in
A mechanism often involves more than two components. These are the full events, with every participant and its role.
Situations it appears in
Low-supply and faulty-machinery situations recorded in the chapters where this component plays a part.
In the sources
Preserved passages that mention this component, quoted exactly. Open one to read it in context.
Open hypotheses
Proposed ideas that involve this component. They are labeled as hypotheses and do not change any recorded statement.
This is a research prototype built from draft material. It is not medical advice, and its statements still await verification against the original studies.