Component
Plasma berberine exposure
Plasma berberine exposure. Species, exposure and limitations are retained in each linked claim.
4 recorded relationships. Experimental role, claim status and evidence remain attached to each record.
How nutrients influence it
Every nutrient with a recorded effect on this component, credited to the nutrient that acted rather than the chapter that recorded it. Open a nutrient to see the findings and the conditions they were measured under.
Other things that act on it
Enzymes, hormones, genes, and other components with a recorded effect. These are not nutrients, so they do not count toward the arrows above. Each finding names the chapter that recorded it.
How nutrients reach it in more than one step
Chains of two or more recorded steps that end here, grouped by the nutrient they start from. Each step is a separate finding, so a chain is a route a mechanism could take, not proof that it does.
Tracing routes…
What it does
Every recorded relationship this component is part of, grouped by its role. Plain wording comes first; the technical statement follows.
What acts on it
Antibiotic depletion reduced berberine-to-dihydroberberine conversion and blood berberine in KK-Ay mice.
Experimental context and source evidence
- availability_state
- machinery_impairment Imported condition classification; unverified.
- evidence_span
- {"source_cache": "artifacts/berberine-research/26174047.abstract.txt", "locator": "Primary indexed abstract; zero-based, end-exclusive Unicode character offsets", "file_sha256": "17b12fa4d334225782db565c20fc34051522dafd77be442782aa82bd1ef34c9e", "start_char": 0, "end_char": 1403, "text_sha256": "17b12fa4d334225782db565c20fc34051522dafd77be442782aa82bd1ef34c9e"}
- experimental_model
- Bacterial enzyme, intestinal tissue, absorption and antibiotic-depletion experiments
- exposure
- Oral berberine, dihydroberberine and antibiotic pretreatment
- limitations
- Animal absorption difference is not a human bioavailability multiplier. Nitroreductases are unresolved bacterial enzyme families; no nitrogen-removal or vitamin-depletion mechanism inferred.
- nutrient_topic
- Berberine research collection; topical membership is not evidence of a direct dietary effect. · Berberine
- organism
- Gut bacteria and rodents including KK-Ay mice
- plain_language
- Removing part of the processing system reduced absorption.
- primary_references
- [berberine-p26174047] Transforming berberine into its intestine-absorbable form by the gut microbiota. (2015). https://pubmed.ncbi.nlm.nih.gov/26174047/ DOI: 10.1038/srep12155
- tissue_or_cell_type
- Gut lumen, intestinal tissue and circulation
- trigger_kind
- machinery_impairment Imported condition classification; unverified.
Berberine: metabolism, nutrient connections and drug interactions (2026-09-17) · lines 181–192
AI-assisted literature curation; primary study URLs and scope retained in the document and extraction. Not publisher full text. · supports · Bacterial enzyme, intestinal tissue, absorption and antibiotic-depletion experiments · source_derived_draft · unverified_draft
### berberine-bacteria-depletion Antibiotic depletion reduced berberine-to-dihydroberberine conversion and blood berberine in KK-Ay mice. Condition category: machinery_impairment nutrient_topic: Berberine research collection; topical membership is not evidence of a direct dietary effect. plain_language: Removing part of the processing system reduced absorption. organism: Gut bacteria and rodents including KK-Ay mice tissue_or_cell_type: Gut lumen, intestinal tissue and circulation experimental_model: Bacterial enzyme, intestinal tissue, absorption and antibiotic-depletion experiments limitations: Animal absorption difference is not a human bioavailability multiplier. Nitroreductases are unresolved bacterial enzyme families; no nitrogen-removal or vitamin-depletion mechanism inferred. exposure: Oral berberine, dihydroberberine and antibiotic pretreatment evidence_span: {"source_cache": "artifacts/berberine-research/26174047.abstract.txt", "locator": "Primary indexed abstract; zero-based, end-exclusive Unicode character offsets", "file_sha256": "17b12fa4d334225782db565c20fc34051522dafd77be442782aa82bd1ef34c9e", "start_char": 0, "end_char": 1403, "text_sha256": "17b12fa4d334225782db565c20fc34051522dafd77be442782aa82bd1ef34c9e"} [berberine-p26174047] Transforming berberine into its intestine-absorbable form by the gut microbiota. (2015). https://pubmed.ncbi.nlm.nih.gov/26174047/ DOI: 10.1038/srep12155
Complete structured claim and evidenceHuman fecal nitroreductase activity correlated positively with blood berberine, with reported r=0.703.
Experimental context and source evidence
- evidence_span
- {"source_cache": "artifacts/berberine-research/28744326.abstract.txt", "locator": "Primary indexed abstract; zero-based, end-exclusive Unicode character offsets", "file_sha256": "d386d585993ca345f94fd99c5fbe0b209f6000fc10852db0a88621c03fc77830", "start_char": 0, "end_char": 1247, "text_sha256": "d386d585993ca345f94fd99c5fbe0b209f6000fc10852db0a88621c03fc77830"}
- experimental_model
- Dietary animal experiments and human observational pharmacokinetic comparison
- exposure
- High-fat diet in hamsters; oral berberine in animal and human arms
- limitations
- Human association does not validate fecal nitroreductase as a clinical dosing test. Diet, disease and microbial composition are potential covariates.
- nutrient_topic
- Berberine research collection; topical membership is not evidence of a direct dietary effect. · Berberine
- organism
- Hamsters, human hyperlipidemia patients and healthy participants
- plain_language
- Microbial processing may help explain why exposure differs between people.
- primary_references
- [berberine-p28744326] Gut Microbiota-Mediated Personalized Treatment of Hyperlipidemia Using Berberine. (2017). https://pubmed.ncbi.nlm.nih.gov/28744326/ DOI: 10.7150/thno.18290
- tissue_or_cell_type
- Fecal enzyme activity and blood berberine
Berberine: metabolism, nutrient connections and drug interactions (2026-09-17) · lines 194–205
AI-assisted literature curation; primary study URLs and scope retained in the document and extraction. Not publisher full text. · supports · Dietary animal experiments and human observational pharmacokinetic comparison · source_derived_draft · unverified_draft
### berberine-nitroreductase-marker Human fecal nitroreductase activity correlated positively with blood berberine, with reported r=0.703. Condition category: normal nutrient_topic: Berberine research collection; topical membership is not evidence of a direct dietary effect. plain_language: Microbial processing may help explain why exposure differs between people. organism: Hamsters, human hyperlipidemia patients and healthy participants tissue_or_cell_type: Fecal enzyme activity and blood berberine experimental_model: Dietary animal experiments and human observational pharmacokinetic comparison limitations: Human association does not validate fecal nitroreductase as a clinical dosing test. Diet, disease and microbial composition are potential covariates. exposure: High-fat diet in hamsters; oral berberine in animal and human arms evidence_span: {"source_cache": "artifacts/berberine-research/28744326.abstract.txt", "locator": "Primary indexed abstract; zero-based, end-exclusive Unicode character offsets", "file_sha256": "d386d585993ca345f94fd99c5fbe0b209f6000fc10852db0a88621c03fc77830", "start_char": 0, "end_char": 1247, "text_sha256": "d386d585993ca345f94fd99c5fbe0b209f6000fc10852db0a88621c03fc77830"} [berberine-p28744326] Gut Microbiota-Mediated Personalized Treatment of Hyperlipidemia Using Berberine. (2017). https://pubmed.ncbi.nlm.nih.gov/28744326/ DOI: 10.7150/thno.18290
Complete structured claim and evidencePoor OCT1 transporters did not show a difference in human berberine pharmacokinetics despite reduced uptake by variant OCT1 in vitro.
Experimental context and source evidence
- evidence_span
- {"source_cache": "artifacts/berberine-research/39488825.abstract.txt", "locator": "Primary indexed abstract; zero-based, end-exclusive Unicode character offsets", "file_sha256": "ba324da62a36391435595fd7c4de2a848aae714abd4df063433362e4fdddce33", "start_char": 0, "end_char": 1787, "text_sha256": "ba324da62a36391435595fd7c4de2a848aae714abd4df063433362e4fdddce33"}
- experimental_model
- Transporter kinetics, mouse perfusion and human genotype-stratified pharmacokinetics
- exposure
- Oral berberine; OCT1 and CYP2D6 functional variants; sex-stratified analysis
- limitations
- Human OCT1 null finding differs from cellular and mouse findings. Sex-specific CYP2D6 result is not a universal rule for all formulations or a dosing algorithm.
- nutrient_topic
- Berberine research collection; topical membership is not evidence of a direct dietary effect. · Berberine
- organism
- Human participants and human OCT1; Oct1/2-deficient mice in separate arms
- plain_language
- A cell-transport difference did not translate into a detected blood-level difference.
- primary_references
- [berberine-p39488825] Sex-Dependent Effects of CYP2D6 on the Pharmacokinetics of Berberine in Humans. (2025). https://pubmed.ncbi.nlm.nih.gov/39488825/ DOI: 10.1002/cpt.3454
- tissue_or_cell_type
- Liver transport and systemic exposure
Berberine: metabolism, nutrient connections and drug interactions (2026-09-17) · lines 259–270
AI-assisted literature curation; primary study URLs and scope retained in the document and extraction. Not publisher full text. · supports · Transporter kinetics, mouse perfusion and human genotype-stratified pharmacokinetics · source_derived_draft · unverified_draft
### berberine-oct1-genotype-null Poor OCT1 transporters did not show a difference in human berberine pharmacokinetics despite reduced uptake by variant OCT1 in vitro. Condition category: normal nutrient_topic: Berberine research collection; topical membership is not evidence of a direct dietary effect. plain_language: A cell-transport difference did not translate into a detected blood-level difference. organism: Human participants and human OCT1; Oct1/2-deficient mice in separate arms tissue_or_cell_type: Liver transport and systemic exposure experimental_model: Transporter kinetics, mouse perfusion and human genotype-stratified pharmacokinetics limitations: Human OCT1 null finding differs from cellular and mouse findings. Sex-specific CYP2D6 result is not a universal rule for all formulations or a dosing algorithm. exposure: Oral berberine; OCT1 and CYP2D6 functional variants; sex-stratified analysis evidence_span: {"source_cache": "artifacts/berberine-research/39488825.abstract.txt", "locator": "Primary indexed abstract; zero-based, end-exclusive Unicode character offsets", "file_sha256": "ba324da62a36391435595fd7c4de2a848aae714abd4df063433362e4fdddce33", "start_char": 0, "end_char": 1787, "text_sha256": "ba324da62a36391435595fd7c4de2a848aae714abd4df063433362e4fdddce33"} [berberine-p39488825] Sex-Dependent Effects of CYP2D6 on the Pharmacokinetics of Berberine in Humans. (2025). https://pubmed.ncbi.nlm.nih.gov/39488825/ DOI: 10.1002/cpt.3454
Complete structured claim and evidenceFemale participants had 2.8-fold higher berberine AUC and 3.6-fold higher Cmax than males; CYP2D6 explained only part of the difference.
Experimental context and source evidence
- evidence_span
- {"source_cache": "artifacts/berberine-research/39488825.abstract.txt", "locator": "Primary indexed abstract; zero-based, end-exclusive Unicode character offsets", "file_sha256": "ba324da62a36391435595fd7c4de2a848aae714abd4df063433362e4fdddce33", "start_char": 0, "end_char": 1787, "text_sha256": "ba324da62a36391435595fd7c4de2a848aae714abd4df063433362e4fdddce33"}
- experimental_model
- Transporter kinetics, mouse perfusion and human genotype-stratified pharmacokinetics
- exposure
- Oral berberine; OCT1 and CYP2D6 functional variants; sex-stratified analysis
- limitations
- Human OCT1 null finding differs from cellular and mouse findings. Sex-specific CYP2D6 result is not a universal rule for all formulations or a dosing algorithm.
- nutrient_topic
- Berberine research collection; topical membership is not evidence of a direct dietary effect. · Berberine
- organism
- Human participants and human OCT1; Oct1/2-deficient mice in separate arms
- plain_language
- The same exposure can produce different blood levels across groups.
- primary_references
- [berberine-p39488825] Sex-Dependent Effects of CYP2D6 on the Pharmacokinetics of Berberine in Humans. (2025). https://pubmed.ncbi.nlm.nih.gov/39488825/ DOI: 10.1002/cpt.3454
- tissue_or_cell_type
- Liver transport and systemic exposure
Berberine: metabolism, nutrient connections and drug interactions (2026-09-17) · lines 285–296
AI-assisted literature curation; primary study URLs and scope retained in the document and extraction. Not publisher full text. · supports · Transporter kinetics, mouse perfusion and human genotype-stratified pharmacokinetics · source_derived_draft · unverified_draft
### berberine-sex-exposure Female participants had 2.8-fold higher berberine AUC and 3.6-fold higher Cmax than males; CYP2D6 explained only part of the difference. Condition category: normal nutrient_topic: Berberine research collection; topical membership is not evidence of a direct dietary effect. plain_language: The same exposure can produce different blood levels across groups. organism: Human participants and human OCT1; Oct1/2-deficient mice in separate arms tissue_or_cell_type: Liver transport and systemic exposure experimental_model: Transporter kinetics, mouse perfusion and human genotype-stratified pharmacokinetics limitations: Human OCT1 null finding differs from cellular and mouse findings. Sex-specific CYP2D6 result is not a universal rule for all formulations or a dosing algorithm. exposure: Oral berberine; OCT1 and CYP2D6 functional variants; sex-stratified analysis evidence_span: {"source_cache": "artifacts/berberine-research/39488825.abstract.txt", "locator": "Primary indexed abstract; zero-based, end-exclusive Unicode character offsets", "file_sha256": "ba324da62a36391435595fd7c4de2a848aae714abd4df063433362e4fdddce33", "start_char": 0, "end_char": 1787, "text_sha256": "ba324da62a36391435595fd7c4de2a848aae714abd4df063433362e4fdddce33"} [berberine-p39488825] Sex-Dependent Effects of CYP2D6 on the Pharmacokinetics of Berberine in Humans. (2025). https://pubmed.ncbi.nlm.nih.gov/39488825/ DOI: 10.1002/cpt.3454
Complete structured claim and evidence
The events it takes part in
A mechanism often involves more than two components. These are the full events, with every participant and its role.
Situations it appears in
Low-supply and faulty-machinery situations recorded in the chapters where this component plays a part.
In the sources
Preserved passages that mention this component, quoted exactly. Open one to read it in context.
Open hypotheses
Proposed ideas that involve this component. They are labeled as hypotheses and do not change any recorded statement.
This is a research prototype built from draft material. It is not medical advice, and its statements still await verification against the original studies.