Component
Notch intracellular domain generation by gamma-secretase
Notch intracellular domain generation by gamma-secretase. Species, exposure and limitations are retained in each linked claim.
2 recorded relationships. Experimental role, claim status and evidence remain attached to each record.
How nutrients influence it
Every nutrient with a recorded effect on this component, credited to the nutrient that acted rather than the chapter that recorded it. Open a nutrient to see the findings and the conditions they were measured under.
Other things that act on it
Enzymes, hormones, genes, and other components with a recorded effect. These are not nutrients, so they do not count toward the arrows above. Each finding names the chapter that recorded it.
How nutrients reach it in more than one step
Chains of two or more recorded steps that end here, grouped by the nutrient they start from. Each step is a separate finding, so a chain is a route a mechanism could take, not proof that it does.
Tracing routes…
What it does
Every recorded relationship this component is part of, grouped by its role. Plain wording comes first; the technical statement follows.
Where it participates (unsigned role)
Sulindac sulfide directly acts on gamma-secretase and preferentially inhibits the activity generating amyloid-beta 42 from solubilised membrane fractions in an in vitro assay using recombinant amyloid precursor protein C100 as substrate, also inhibiting generation of amyloid-beta 40 and of the Notch intracellular domain at higher concentrations, and displaying linear noncompetitive inhibition profiles for the amyloid-beta 42 generating activity.
Experimental context and source evidence
- evidence_span
- {"source_cache": "artifacts/ibuprofen-research/12637581.abstract.txt", "locator": "Indexed abstract; zero-based, end-exclusive Unicode character offsets", "file_sha256": "e0da78f88f2dfa34808abab5f1d223bdbc0372f5ea26a626b9697e0ad2255a7c", "start_char": 0, "end_char": 1209, "text_sha256": "e0da78f88f2dfa34808abab5f1d223bdbc0372f5ea26a626b9697e0ad2255a7c"}
- experimental_model
- In vitro gamma-secretase assay on solubilised HeLa membrane fractions with recombinant amyloid precursor protein C100
- exposure
- Sulindac sulfide applied to isolated gamma-secretase activity
- limitations
- A cell-free assay that can distinguish direct action on the enzyme from an effect on the cell. It tests sulindac sulfide rather than ibuprofen, which is recorded on the claim.
- nutrient_topic
- Ibuprofen research collection; topical membership is not evidence of a direct clinical effect, and the racemate is recorded separately from each of its two enantiomers. · Ibuprofen
- organism
- Human cells
- plain_language
- Taken out of the cell entirely, the drug still acts on the enzyme itself, and prefers the reaction that makes the harmful fragment.
- primary_references
- [ibu-p12637581] Sulindac sulfide is a noncompetitive gamma-secretase inhibitor that preferentially reduces Abeta 42 generation. (2003). https://pubmed.ncbi.nlm.nih.gov/12637581/ DOI: 10.1074/jbc.m301619200
- tissue_or_cell_type
- Solubilised membrane fractions
AI-assisted literature curation; primary study URLs and scope retained in the document and extraction. Not publisher full text. · supports · In vitro gamma-secretase assay on solubilised HeLa membrane fractions with recombinant amyloid precursor protein C100 · source_derived_draft · unverified_draft
### ibu-direct-on-gamma-secretase Sulindac sulfide directly acts on gamma-secretase and preferentially inhibits the activity generating amyloid-beta 42 from solubilised membrane fractions in an in vitro assay using recombinant amyloid precursor protein C100 as substrate, also inhibiting generation of amyloid-beta 40 and of the Notch intracellular domain at higher concentrations, and displaying linear noncompetitive inhibition profiles for the amyloid-beta 42 generating activity. Condition category: normal nutrient_topic: Ibuprofen research collection; topical membership is not evidence of a direct clinical effect, and the racemate is recorded separately from each of its two enantiomers. plain_language: Taken out of the cell entirely, the drug still acts on the enzyme itself, and prefers the reaction that makes the harmful fragment. organism: Human cells tissue_or_cell_type: Solubilised membrane fractions experimental_model: In vitro gamma-secretase assay on solubilised HeLa membrane fractions with recombinant amyloid precursor protein C100 limitations: A cell-free assay that can distinguish direct action on the enzyme from an effect on the cell. It tests sulindac sulfide rather than ibuprofen, which is recorded on the claim. exposure: Sulindac sulfide applied to isolated gamma-secretase activity evidence_span: {"source_cache": "artifacts/ibuprofen-research/12637581.abstract.txt", "locator": "Indexed abstract; zero-based, end-exclusive Unicode character offsets", "file_sha256": "e0da78f88f2dfa34808abab5f1d223bdbc0372f5ea26a626b9697e0ad2255a7c", "start_char": 0, "end_char": 1209, "text_sha256": "e0da78f88f2dfa34808abab5f1d223bdbc0372f5ea26a626b9697e0ad2255a7c"} [ibu-p12637581] Sulindac sulfide is a noncompetitive gamma-secretase inhibitor that preferentially reduces Abeta 42 generation. (2003). https://pubmed.ncbi.nlm.nih.gov/12637581/ DOI: 10.1074/jbc.m301619200
Complete structured claim and evidenceIbuprofen, indomethacin and sulindac sulphide preferentially decreased the highly amyloidogenic amyloid-beta 42 peptide produced by a variety of cultured cells by as much as 80%, an effect not seen with all non-steroidal anti-inflammatory drugs and seemingly not mediated by inhibition of cyclooxygenase activity, and short-term administration of ibuprofen to mice producing mutant amyloid precursor protein lowered brain amyloid-beta 42; in cultured cells the decrease was accompanied by an increase in the amyloid-beta 1-38 isoform, indicating that these drugs subtly alter gamma-secretase activity without significantly perturbing other processing pathways or Notch cleavage.
Experimental context and source evidence
- evidence_span
- {"source_cache": "artifacts/ibuprofen-research/11700559.abstract.txt", "locator": "Indexed abstract; zero-based, end-exclusive Unicode character offsets", "file_sha256": "eb9be6e821c04b48c65a999ac5852996bcb4f0249b8bd78b4454a256435e8267", "start_char": 0, "end_char": 1411, "text_sha256": "eb9be6e821c04b48c65a999ac5852996bcb4f0249b8bd78b4454a256435e8267"}
- experimental_model
- Cultured cells of several types and mutant amyloid precursor protein transgenic mice
- exposure
- Ibuprofen, indomethacin and sulindac sulphide, with short-term ibuprofen administration in vivo
- limitations
- The cyclooxygenase-independence is inferred from the fact that the effect is not shared by all inhibitors of the enzyme, rather than shown by a genetic control. Short-term dosing in a transgenic model.
- nutrient_topic
- Ibuprofen research collection; topical membership is not evidence of a direct clinical effect, and the racemate is recorded separately from each of its two enantiomers. · Ibuprofen
- organism
- Human cells and mouse
- plain_language
- The drug shifts where an enzyme cuts rather than stopping it, and the sticky fragment is replaced by a shorter harmless one.
- primary_references
- [ibu-p11700559] A subset of NSAIDs lower amyloidogenic Abeta42 independently of cyclooxygenase activity. (2001). https://pubmed.ncbi.nlm.nih.gov/11700559/ DOI: 10.1038/35102591
- tissue_or_cell_type
- Cultured cells and brain
AI-assisted literature curation; primary study URLs and scope retained in the document and extraction. Not publisher full text. · supports · Cultured cells of several types and mutant amyloid precursor protein transgenic mice · source_derived_draft · unverified_draft
### ibu-lowers-abeta42-not-via-cox Ibuprofen, indomethacin and sulindac sulphide preferentially decreased the highly amyloidogenic amyloid-beta 42 peptide produced by a variety of cultured cells by as much as 80%, an effect not seen with all non-steroidal anti-inflammatory drugs and seemingly not mediated by inhibition of cyclooxygenase activity, and short-term administration of ibuprofen to mice producing mutant amyloid precursor protein lowered brain amyloid-beta 42; in cultured cells the decrease was accompanied by an increase in the amyloid-beta 1-38 isoform, indicating that these drugs subtly alter gamma-secretase activity without significantly perturbing other processing pathways or Notch cleavage. Condition category: normal nutrient_topic: Ibuprofen research collection; topical membership is not evidence of a direct clinical effect, and the racemate is recorded separately from each of its two enantiomers. plain_language: The drug shifts where an enzyme cuts rather than stopping it, and the sticky fragment is replaced by a shorter harmless one. organism: Human cells and mouse tissue_or_cell_type: Cultured cells and brain experimental_model: Cultured cells of several types and mutant amyloid precursor protein transgenic mice limitations: The cyclooxygenase-independence is inferred from the fact that the effect is not shared by all inhibitors of the enzyme, rather than shown by a genetic control. Short-term dosing in a transgenic model. exposure: Ibuprofen, indomethacin and sulindac sulphide, with short-term ibuprofen administration in vivo evidence_span: {"source_cache": "artifacts/ibuprofen-research/11700559.abstract.txt", "locator": "Indexed abstract; zero-based, end-exclusive Unicode character offsets", "file_sha256": "eb9be6e821c04b48c65a999ac5852996bcb4f0249b8bd78b4454a256435e8267", "start_char": 0, "end_char": 1411, "text_sha256": "eb9be6e821c04b48c65a999ac5852996bcb4f0249b8bd78b4454a256435e8267"} [ibu-p11700559] A subset of NSAIDs lower amyloidogenic Abeta42 independently of cyclooxygenase activity. (2001). https://pubmed.ncbi.nlm.nih.gov/11700559/ DOI: 10.1038/35102591
Complete structured claim and evidence
The events it takes part in
A mechanism often involves more than two components. These are the full events, with every participant and its role.
Situations it appears in
Low-supply and faulty-machinery situations recorded in the chapters where this component plays a part.
In the sources
Preserved passages that mention this component, quoted exactly. Open one to read it in context.
Open hypotheses
Proposed ideas that involve this component. They are labeled as hypotheses and do not change any recorded statement.
This is a research prototype built from draft material. It is not medical advice, and its statements still await verification against the original studies.